Research output per year

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Fingerprint Dive into the research topics where Dick de Ridder is active. These topic labels come from the works of this person. Together they form a unique fingerprint. If staff member(s) published prior to his/her WUR affiliation, it is possible that the publication overview, Fingerprint and network diagram are incomplete.

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Research Output

Caretta – A multiple protein structure alignment and feature extraction suite

Akdel, M., Durairaj, J., de Ridder, D. & van Dijk, A. D. J., 2020, In : Computational and Structural Biotechnology Journal. 18, p. 981-992 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
  • Designing Eukaryotic Gene Expression Regulation Using Machine Learning

    de Jongh, R. P. H., van Dijk, A. D. J., Julsing, M. K., Schaap, P. J. & de Ridder, D., Feb 2020, In : Trends in Biotechnology. 38, 2, p. 191-201

    Research output: Contribution to journalArticleAcademicpeer-review

  • 1 Citation (Scopus)

    Hap10: Reconstructing accurate and long polyploid haplotypes using linked reads

    Majidian, S., Kahaei, M. H. & De Ridder, D., 18 Jun 2020, In : BMC Bioinformatics. 21, 1, 253.

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
  • Meiotic recombination profiling of interspecific hybrid F1 tomato pollen by linked read sequencing

    Fuentes, R., Hesselink, T., Nieuwenhuis, R., Bakker, L. V., Schijlen, E. G. W. M., van Dooijeweert, W., Diaz Trivino, S., de Haan, J. R., Sanchez Perez, G. F., Zhang, X., Fransz, P., de Jong, J. H. S. G. M., van Dijk, A. D. J., de Ridder, D. & Peters, S. A., May 2020, In : The Plant Journal. 102, 3, p. 480-492

    Research output: Contribution to journalArticleAcademicpeer-review

  • Minimum error correction-based haplotype assembly: Considerations for long read data

    Majidian, S., Kahaei, M. H. & de Ridder, D., 12 Jun 2020, In : PLoS ONE. 15, 6, p. e0234470

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
  • Datasets

    Profile hidden Markov models trained on aligned KEGG Orthology sequences for enzyme annotation

    Rodenburg, Y. A. (Creator), de Ridder, D. (Contributor), Govers, F. (Contributor) & Seidl, M. (Creator), Wageningen University & Research, 7 Oct 2019


    Single-molecule protein sequencing through fingerprinting: computational assessment

    Yao, Y. (Creator), Docter, M. W. (Creator), van Ginkel, H. G. T. M. (Creator), de Ridder, D. (Creator) & Joo, C. (Creator), Delft University of Technology, 19 Jan 2018


    Olfactomedin 4 serves as a marker for disease severity in pediatric Respiratory Syncytial Virus (RSV) infection

    Brand, K. H. (Creator), Ahout, I. M. (Creator), de Ridder, D. (Creator), van Diepen, A. (Creator), Li, Y. (Creator), Zaalberg, M. (Creator), Andeweg, A. (Creator), Roeleveld, N. (Creator), de Groot, R. (Creator), Warris, A. (Creator), Hermans, P. W. (Creator), Ferwerda, G. (Creator) & Staal, F. J. (Creator), Wageningen University, 6 Jun 2015


    Comparative genomics including the basal pathogen Peronospora belbahrii reveal common evolutionary patterns and the monophyly of downy mildews in a paraphyletic Phytophthora

    Thines, M. (Creator), Sharma, R. (Creator), Rodenburg, Y. A. (Creator), Gogleva, A. (Creator), Judelson, H. S. (Creator), Xia, X. (Creator), van den Hoogen, D. J. (Creator), Kitner, M. (Creator), Klein, J. (Creator), de Ridder, D. (Creator), Seidl, M. (Creator), van den Ackerveken, G. (Creator), Govers, F. (Creator), Schornack, S. (Creator) & Studholme, D. J. (Creator), 10 Aug 2018



    • 1 Other
    • 1 Oral presentation
    • 1 Public lecture/debate/seminar

    From GWAS Peak to Causal Mutation; Utilizing p(ig)CADD Scores to Prioritize Sequence Variation

    Martijn Derks (Speaker), , Christian Gross (Contributor), , M.S. Lopes (Contributor), , M.J.T. Reinders (Contributor), , Mirte Bosse (Contributor), , Arne B. Gjuvsland (Contributor), , Hendrik-Jan Megens (Contributor), , Dick de Ridder (Contributor), & Martien Groenen (Contributor)

    11 Jan 202015 Jan 2020

    Activity: Talk or presentationPublic lecture/debate/seminar

    A survey of deleterious variants in highly managed commercial layer lines

    M.F.L. Derks (Presenter), , H.J.W.C. Megens (Contributor), , M. Bosse (Contributor), , Christian Gross (Contributor), , M. Reinders (Contributor), , D. de Ridder (Contributor), & M. Groenen (Contributor)

    4 Apr 2017

    Activity: Other

    Identification of Deleterious Alleles in Poultry

    M.F.L. Derks (Contributor), , M. Bosse (Speaker), , H.J.W.C. Megens (Contributor), , D. de Ridder (Contributor), , Marcel J.T. Reinders (Contributor), , Christian Gross (Contributor), & M. Groenen (Contributor)

    15 Jan 2017

    Activity: Talk or presentationOral presentation

    Press / Media

    Forecasting with digital doppelgängers

    Dick de Ridder


    2 Media contributions

    Press/Media: Expert Comment