Diana Machado de Sousa

Search results

• Transcriptomics datasets for Clostridium autoethanogenum grown on CO in different environmental conditions

  Diender, M. (Creator), Koehorst, J. (Creator) & Machado de Sousa, D. (Creator), Wageningen University & Research, 25 Jan 2019

  DOI: 10.4121/uuid:b6bd64a9-5bdb-4655-9829-520aa4600987

  Dataset

• Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species

  Strepis, N. (Creator), Naranjo, H. D. (Creator), Meier-Kolthoff, J. P. (Creator), Göker, M. (Creator), Shapiro, N. (Creator), Kyrpides, N. C. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, F. (Creator) & Machado de Sousa, D. (Creator), Wageningen University & Research, 9 Jan 2020

  DOI: 10.6084/m9.figshare.c.4810569

  Dataset

• Metabolic engineering of Clostridium autoethanogenum for ethyl acetate production from CO

  Dykstra, J. (Creator), van Oort, J. (Creator), Yazdi, A. T. (Creator), Vossen, E. (Creator), Patinios, C. (Creator), van der Oost, J. (Creator), Machado de Sousa, D. (Creator) & Kengen, S. (Creator), Wageningen University, 25 Nov 2022

  DOI: 10.6084/m9.figshare.c.6317418

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12709

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12706

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12707

  Dataset

• Genome assembly of a novel psychrotolerance bacterium, Trichococcus ART1 .

  Parshina, S. (Creator), Strepis, N. (Creator), Aalvink, S. (Creator), Nozhevnikova, A. N. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 13 Jun 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB26366

  Dataset

• Natranaerofaba carboxydovora strain:ANCO1 Genome sequencing and assembly

  Sorokin, D. Y. (Creator), Diender, M. (Creator), Merkel, A. Y. (Creator), Koenen, M. (Creator), Bale, N. J. (Creator), Pabst, M. (Creator), Sinninghe Damsté, J. S. (Creator) & Machado de Sousa, D. (Creator), Wageningen University & Research, 10 Mar 2022

  https://www.ncbi.nlm.nih.gov/bioproject/634870

  Dataset

• Long-chain fatty acids degradation by Desulfomonile species, proposal of “Candidatus Desulfomonile palmitatoxidans” and emended description of the genus Desulfomonile

  Alves, J. I. (Creator), Salvador, A. F. (Creator), Castro, A. R. (Creator), Zheng, Y. (Creator), Nijsse, B. (Creator), Atashgahi, S. (Creator), Machado de Sousa, D. (Creator), Stams, F. (Creator), Alves, M. M. (Creator) & Cavaleiro, A. J. (Creator), Wageningen University, 17 Feb 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB35900

  Dataset

• Effect of nickel and cobalt on methanogenic enrichment cultures and role of biogenic sulphide in metal toxicity attenuation

  da Luz Ferreira Martins Paulo, L. (Creator), Ramiro Garcia, J. (Creator), van Mourik, S. (Creator), Stams, F. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 1 May 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB20620

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 20 May 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB13128

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12708

  Dataset

• Genome sequence of Desulfovibrio sp. G11

  Sanchez Andrea, I. (Creator), Alves Guedes, I. (Creator), Hornung, B. (Creator), Boeren, S. (Creator), Lawson, C. E. (Creator), Machado de Sousa, D. (Creator), Bar-Even, A. (Creator), Claassens, N. J. H. P. (Creator) & Stams, F. (Creator), Wageningen University & Research, 11 Aug 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB22313

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Naranjo, H. D. (Creator), Meier-Kolthoff, J. P. (Creator), Göker, M. (Creator), Shapiro, N. (Creator), Kyrpides, N. C. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, F. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 11 Apr 2016

  https://www.ncbi.nlm.nih.gov/bioproject/PRJEB12706/

  Dataset

• ANEO-GEM: The consensus genome-scale metabolic model of Anaerotignum neopropionicum

  Benito-Vaquerizo, S. (Creator), Parera Olm, I. (Creator), de Vroet, T. (Creator), Schaap, P. (Creator), Machado de Sousa, D. (Creator), Martins dos Santos, V. (Creator) & Suarez Diez, M. (Creator), Wageningen University & Research, 2022

  https://gitlab.com/wurssb/Modelling/Anaerotignum_neopropionicum

  Dataset

• Sulfate-reducing palmitate degrading enrichments

  Alves, J. I. (Creator), Salvador, A. F. (Creator), Castro, A. R. (Creator), Zheng, Y. (Creator), Nijsse, B. (Creator), Atashgahi, S. (Creator), Machado de Sousa, D. (Creator), Stams, F. (Creator), Alves, M. M. (Creator) & Cavaleiro, A. J. (Creator), University of Minho, 9 Jul 2018

  https://www.ebi.ac.uk/ena/browser/view/PRJEB26656

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12705

  Dataset

• Genome sequencing and description of Lucifera butyrica gen. nov. sp. nov., an novel glycerol fermenter and sulfur respirer isolated from acid rock drainage

  Sanchez Andrea, I. (Creator), Florentino de Souza Silva, A. (Creator), Semerel, J. (Creator), Strepis, N. (Creator), Machado de Sousa, D. (Creator) & Stams, F. (Creator), Wageningen University, 29 Sept 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB13757

  Dataset

• Comparative genomic and physiological analysis of Trichococcus species

  Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, A. J. M. (Creator) & Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12704

  Dataset