Detmer Sipkema

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Research Output

56 Article
8 Abstract
2 Comment/Letter to the editor
1 Report
3 More

Cultivation of Bacteria From Aplysina aerophoba: Effects of Oxygen and Nutrient Gradients

Gutleben, J., Loureiro, C., Ramírez Romero, L. A., Shetty, S., Wijffels, R. H., Smidt, H. & Sipkema, D., 19 Feb 2020, In : Frontiers in Microbiology. 11, 175.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Feed, Microbiota, and Gut Immunity: Using the Zebrafish Model to Understand Fish Health

López Nadal, A., Ikeda-Ohtsubo, W., Sipkema, D., Peggs, D., McGurk, C., Forlenza, M., Wiegertjes, G. F. & Brugman, S., 5 Feb 2020, In : Frontiers in Immunology. 11, 114.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

1 Citation (Scopus)

Metagenomic-and cultivation-based exploration of anaerobic chloroform biotransformation in hypersaline sediments as natural source of chloromethanes

Peng, P., Lu, Y., Bosma, T. N. P., Nijenhuis, I., Nijsse, B., Shetty, S. A., Ruecker, A., Umanets, A., Ramiro-Garcia, J., Kappler, A., Sipkema, D., Smidt, H. & Atashgahi, S., May 2020, In : Microorganisms. 8, 5, 665.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Microbiota changes and immune-modulation by feed in zebrafish

Lopez Nadal, A., Lute, C., Sipkema, D., Peggs, D., McGurk, C., Wiegertjes, G. & Brugman, S., 14 Feb 2020, WIAS Annual Conference 2020: Frontiers in Animal Sciences. WIAS, p. 26-26

Research output: Chapter in Book/Report/Conference proceeding › Abstract

Open Access

Organohalide-respiring Desulfoluna species isolated from marine environments

Peng, P., Goris, T., Lu, Y., Nijsse, B., Burrichter, A., Schleheck, D., Koehorst, J. J., Liu, J., Sipkema, D., Sinninghe Damste, J. S., Stams, A. J. M., Häggblom, M. M., Smidt, H. & Atashgahi, S., Mar 2020, In : ISME Journal. 14, p. 815–827

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Datasets

Molecular analysis of sponge-associated fungi

Mohamad, M. A. N. (Creator), Smidt, H. (Creator), Sipkema, D. (Creator), Wageningen University, 31 Mar 2013

https://www.ebi.ac.uk/ena/data/view/PRJEB1704

Dataset

Cultured bacterial diversity of sponges still largely unexplored: a cultivation study of three Mediterranean sponges

Versluis, D. (Creator), Mcpherson, K. R. (Creator), van Passel, M. W. J. (Creator), Smidt, H. (Creator), Sipkema, D. (Creator), Wageningen University, 22 Apr 2015

https://www.ebi.ac.uk/ena/data/view/PRJEB8621

Dataset

The colonization dynamics of the gut microbiota in tilapia larvae

Giatsis, C. (Creator), Sipkema, D. (Creator), Smidt, H. (Creator), Verreth, J. (Creator), Verdegem, M. (Creator), Wageningen University, 31 Aug 2013

https://www.ebi.ac.uk/ena/data/view/PRJEB4462

Dataset

NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes

Ramiro Garcia, J. (Creator), Hermes, G. (Creator), Giatsis, C. (Creator), Sipkema, D. (Creator), Zoetendal, E. (Creator), Schaap, P. (Creator), Smidt, H. (Creator), Wageningen University, 11 Nov 2015

https://www.ebi.ac.uk/ena/data/view/PRJEB11702

Dataset

Comparative genomics, symbiotic capacities and high metabolic flexibility of the marine genus Pseudovibrio

Versluis, D. (Creator), Nijsse, B. (Creator), Mohamad, M. A. N. (Creator), Koehorst, J. (Creator), Wiese, J. (Creator), Imhoff, J. F. (Creator), Schaap, P. (Creator), van Passel, M. W. J. (Creator), Smidt, H. (Creator), Sipkema, D. (Creator), Wageningen University, 28 Jun 2017

https://www.ebi.ac.uk/ena/data/view/PRJEB20602

Dataset