David Meijer, MSc

Search results

• 2024

  CineMol: a programmatically accessible direct-to-SVG 3D small molecule drawer

  Meijer, D., Medema, M. H. & van der Hooft, J. J. J., 23 May 2024, In: Journal of Cheminformatics. 16, 58.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  • 3d Graphics 100%
  • Cheminformatics 100%
  • Python 100%
  • Pythonidae 100%
  • Metabolomics 100%

• Unleashing the potential of cell painting assays for compound activities and hazards prediction

  Odje, F., Meijer, D., von Coburg, E., van der Hooft, J. J. J., Dunst, S., Medema, M. H. & Volkamer, A., 2024, In: Frontiers in Toxicology. 6, 1401036.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  • Animal Testing 100%
  • Drug Discovery 100%
  • Disease 100%
  • Drugs Toxicology 100%
  • Cell Level 100%
  1 Citation (Scopus)
• 2023

  Artificial intelligence for natural product drug discovery

  Mullowney, M. W., Duncan, K. R., Elsayed, S. S., Garg, N., van der Hooft, J. J. J., Martin, N. I., Meijer, D., Terlouw, B. R., Biermann, F., Blin, K., Durairaj, J., Gorostiola González, M., Helfrich, E. J. N., Huber, F., Leopold-Messer, S., Rajan, K., de Rond, T., van Santen, J. A., Sorokina, M., Balunas, M. J., & 38 othersBeniddir, M. A., van Bergeijk, D. A., Carroll, L. M., Clark, C. M., Clevert, D. A., Dejong, C. A., Du, C., Ferrinho, S., Grisoni, F., Hofstetter, A., Jespers, W., Kalinina, O. V., Kautsar, S. A., Kim, H., Leao, T. F., Masschelein, J., Rees, E. R., Reher, R., Reker, D., Schwaller, P., Segler, M., Skinnider, M. A., Walker, A. S., Willighagen, E. L., Zdrazil, B., Ziemert, N., Goss, R. J. M., Guyomard, P., Volkamer, A., Gerwick, W. H., Kim, H. U., Müller, R., van Wezel, G. P., van Westen, G. J. P., Hirsch, A. K. H., Linington, R. G., Robinson, S. L. & Medema, M. H., Nov 2023, In: Nature Reviews Drug Discovery. 22, 11, p. 895-916

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  • Drug Development 100%
  • Drug Discovery 100%
  • Natural Product 100%
  • Artificial Intelligence 100%
  • Tamsulosin 50%
  50 Citations (Scopus)

• MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

  Terlouw, B. R., Blin, K., Navarro-Muñoz, J. C., Avalon, N. E., Chevrette, M. G., Egbert, S., Lee, S., Meijer, D., Recchia, M. J. J., Reitz, ZL., van Santen, JA., Selem-Mojica, N., Tørring, T., Zaroubi, L., Alanjary, M., Aleti, G., Aguilar, C., Al-Salihi, SA. A., Augustijn, HE., Avelar-Rivas, J. A., & 62 othersAvitia-Domínguez, LA., Barona-Gómez, F., Bernaldo-Agüero, J., Bielinski, V. A., Biermann, F., Booth, TJ., Carrion Bravo, VJ., Castelo-Branco, R., Chagas, FO., Cruz-Morales, P., Du, C., Duncan, KR., Gavriilidou, A., Gayrard, D., Gutiérrez-García, K., Haslinger, K., Helfrich, EJ. N., van der Hooft, JJ. J., Jati, AP., Kalkreuter, E., Kalyvas, N., Kang, KB., Kautsar, S., Kim, W., Kunjapur, AM., Li, Y-X., Lin, G-M., Loureiro, C., Louwen, JJ. R., Louwen, NL. L., Lund, G., Parra, J., Philmus, B., Pourmohsenin, B., Pronk, LJ. U., Rego, A., Rex, DAB., Robinson, S., Rosas-Becerra, L. R., Roxborough, ET., Schorn, MA., Scobie, DJ., Singh, KS., Sokolova, N., Tang, X., Udwary, D., Vigneshwari, A., Vind, K., Vromans, SP. J. M., Waschulin, V., Williams, SE., Winter, JM., Witte, TE., Xie, H., Yang, D., Yu, J., Zdouc, M., Zhong, Z., Collemare, J., Linington, RG., Weber, T. & Medema, MH., 6 Jan 2023, In: Nucleic acids research. 51, D1, p. D603-D610

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  • Crop Protection 100%
  • Biocompatible Material 100%
  • Metagenomics 100%
  • Genome Mining 100%
  • Drug Crops 100%
  128 Citations (Scopus)
• 2022

  Good practices and recommendations for using and benchmarking computational metabolomics metabolite annotation tools

  de Jonge, N. F., Mildau, K., Meijer, D., Louwen, J. J. R., Bueschl, C., Huber, F. & van der Hooft, J. J. J., 5 Dec 2022, In: Metabolomics. 18, 12, 103.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

  • Metabolite 100%
  • Metabolomics 100%
  29 Citations (Scopus)