Chrats Melkonian

Chrats Melkonian

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    • 7 Article
    • 2 Short survey
    • 1 Comment/Letter to the editor
    • 1 Letter

    • A roadmap for equitable reuse of public microbiome data

      Hug, L. A., Hatzenpichler, R., Moraru, C., Soares, A. R., Meyer, F., Heyder, A., Abdallah, R. Z., Abdalrahem, A., Abdulkadir, N., Adesiyan, I. M., Alteio, L., Anantharaman, K., Anderson, R., Andrei, A. S., Baeza, J. A., Bak, F., Baker, B., Bartholomäus, A., Bejerman, N. & Biddle, J. & 209 others, Bissett, A., Blakeley-Ruiz, J. A., Block, K., Boldt, J., Bonilla-Rosso, G., Bornemann, T. L., Brauer, V. S., Brazelton, W., Bremges, A., Buelow, E., Burcham, Z. M., Cansdale, A., Caporaso, J. G., Cernava, T., Chatzigiannidou, I., Costa, R., Currie, C. R., Daebeler, A., De Anda, V., De Santiago, A., Arake de Tacca, L. M., Debelius, J., Dittami, S. M., Dong, X., Džunková, M., Edwards, A., Edwards, R., Egbert, S., Engelmann, J. C., Esser, S. P., Ettema, T. J. G., Ettinger, C. L., Petrovic Fabijan, A., Ferguson, R. M. W., Ferretti, P., Foucault, P., Fuhrman, J. A., Gada, A. M., Geesink, P., Gerhardt, I. R., Gessner, M. O., Giovannelli, D., Gittins, D., Gloor, G. B., González-Pech, R. A., Gopalakrishnappa, C., Greening, C., Gregor, R., Gregory, A. C., Grossart, H. P., Groussin, M., Valenzuela Guerrero, B., Guzel, M., Hamamura, N., Hamilton, T. L., Hamm, J. N., Hart, L., Hassenrück, C., Hay, M., Hechler, R. M., Hellwig, P., Henson, M., Herold, M., Hesketh-Best, P. J., Hess, M., Hillary, L., Hitch, T. C., Hivarkar, S. S., Hoff, K. J., Hom, E. F., Hou, S., Hugerth, L. W., Hwang, Y., Ilott, N., Jay, Z. J., Jungbluth, S. P., Karimi, E., Kaspareit, Y. M., Keating, C., Kellom, M., Kiledal, E. A., Klarenberg, I., Knight, R., Koech, A. K., Koonin, E. V., Kormas, K., Kujala, K., Kyrpides, N. C., La Rosa, S. L., Laczny, C. C., Lahmers, K., Lan, X., Lateef, A. A., Lau, S. H., Leese, F., Lezcano, M. Á., Li, S. S., Lima, R. N., Lücker, S., Mahnert, A., Majidian, S., Malfertheiner, L., Marshall, A., Meaden, S., Meehan, C. J., Meier, D. V., Melkonian, C., Mende, D. R., Meyer, J. L., Michoud, G., Mikryukov, V., Miravet-Verde, S., Muschiol, J., Nata’ala, M. K., Neufeld, J. D., Neuhauser, S., Osuolale, O., Osvatic, J., Pappas, K. M., Parks, D. H., Parry, R. H., Pascoal, P. V., Pavloudi, C., Peyton, B., Plewka, J., Poyet, M., Priest, T., Quaye, E. K., Ramganesh, S., Rattei, T., Rausch, P., Rech, E., Rinke, C., Robinson, C., Rodríguez-Gijón, A., Rodriguez-R, L. M., Rohwer, R. R., Roloff, T., Rothman, J. A., Rückert, S., Ruff, S. E., Saini, J. S., Santiago-Martínez, M. G., Santoferrara, L., Sarhan, M. S., Saw, J. H., Sbaffi, T., Schäfer, R. B., Schaible, G., Schloter, M., Schmitz, R. A., Schubert, C., Schwengers, O., Sehnal, L., Sekar, A., Sekar, J., Seyoum, M. M., Shah, M. B., Sharon, I., Siebers, B., Sieradzki, E. T., Skliros, D., Snoeyenbos-West, O. L., Sorbie, A., Speth, D. R., Sprehn, C. G., Srivastava, P., Stach, T. L., Stajich, J. E., Starke, J., Steen, A. D., Stöckl, R., Stoikidou, T., Stopnisek, N., Sukumaran, R., Sures, B., Suzuki, S., Tamarit, D., Thieringer, P., Tito, R. Y., Trivedi, C. B., Trubl, G., Truu, J., Tsiknia, M., Ugalde, J., Valentin-Alvarado, L. E., Vázquez-Campos, X., Vierheilig, J., von Meijenfeldt, F. A. B., Wagner, M., Walsh, C. J., Wang, S., Wang, Y., Wegner, C. E., Weir, T., Weiss, L. C., Weissman, J. L., Wichels, A., Williams, C. L., Williams, T. A., Worden, A. Z., Woyke, T., Wu, M., Xiu, W., Zhang, Y., Zhu, J., Ziels, R. M., Zwirzitz, B. & Probst, A. J., 25 Sept 2025, In: Nature Microbiology. 10, 10, p. 2384-2395

      Research output: Contribution to journal › Letter › Academic › peer-review

    • Author Correction: A roadmap for equitable reuse of public microbiome data

      Hug, L. A., Hatzenpichler, R., Moraru, C., Soares, A. R., Meyer, F., Heyder, A., Zwirzitz, B., Ziels, R. M., Zhu, J., Zhang, Y., Xiu, W., Wu, M., Woyke, T., Worden, A. Z., Williams, T. A., Williams, C. L., Wichels, A., Weissman, J. L., Weiss, L. C. & Weir, T. & 30 others, Wegner, C. E., Wang, Y., Wang, S., Walsh, C. J., Wagner, M., von Meijenfeldt, F. A. B., Vierheilig, J., Vázquez-Campos, X., Valentin-Alvarado, L. E., Ugalde, J., Tsiknia, M., Truu, J., Trubl, G., Trivedi, C. B., Tamarit, D., Starke, J., Schmitz, R. A., Meyer, J. L., Melkonian, C., Majidian, S., Li, S. S., Lezcano, M., Kaspareit, Y. M., Hwang, Y., Hess, M., Herold, M., Hamm, J. N., Geesink, P., Ettema, T. J. G. & Dong, X., 2025, (E-pub ahead of print) In: Nature Microbiology. 1 p.

      Research output: Contribution to journal › Comment/Letter to the editor › Academic

    • Harnessing the phyllosphere microbiota of wild foxtail millet for designing beneficial cross-kingdom synthetic communities

      Zai, X., Zhu, F., Zhao, M., Diao, X., Zhang, F., Dini-Andreote, F., Melkonian, C., Medema, M., Raaijmakers, J., Cordovez, V. & Song, C., 24 Jul 2025, In: ISME Communications. 5, 1, ycaf066.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access

    • MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration

      Zdouc, M. M., Blin, K., Louwen, N. L. L., Navarro, J., Loureiro, C., Bader, C. D., Bailey, C. B., Barra, L., Booth, T. J., Bozhüyük, K. A. J., Cediel-Becerra, J. D. D., Charlop-Powers, Z., Chevrette, M. G., Chooi, Y. H., D’Agostino, P. M., de Rond, T., Pup, E. D., Duncan, K. R., Gu, W. & Hanif, N. & 268 others, Helfrich, E., Jenner, M., Katsuyama, Y., Korenskaia, A., Krug, D., Libis, V., Lund, G. A., Mantri, S., Morgan, K. D., Owen, C., Phan, C. S., Philmus, B., Reitz, Z., Robinson, S. L., Singh, K. S., Teufel, R., Tong, Y., Tugizimana, F., Ulanova, D., Winter, J., Aguilar, C., Akiyama, D. Y., Al-Salihi, S., Alanjary, M., Alberti, F., Aleti, G., Alharthi, S. A., Arias Rojo, M. Y., Arishi, A., Augustijn, H. E., Avalon, N. E., Avelar-Rivas, A., Axt, K. K., Barbieri, H. B., Barbosa, J. C. J., Segato, L. G. B., Barrett, S. E., Baunach, M., Beemelmanns, C., Beqaj, D., Berger, T., Bernaldo-Agüero, J., Bettenbühl, S. M., Bielinski, V. A., Biermann, F., Borges, R. M., Borriss, R., Breitenbach, M., Bretscher, K. M., Brigham, M. W., Buedenbender, L., Bulcock, B. W., Cano-Prieto, C., Capela, J., Carrion, V. J., Carter, R. S., Castelo-Branco, R., Castro-Falcón, G., Chagas, F. O., Charria-Girón, E., Chaudhri, A. A., Chaudhry, V., Choi, H., Choi, Y., Choupannejad, R., Chromy, J., Chue Donahey, M. S., Collemare, J., Connolly, J. A., Creamer, K. E., Crüsemann, M., Cruz, A. A., Cumsille, A., Dallery, J. F., Damas-Ramos, L. C., Damiani, T., de Kruijff, M., Martín, B. D., Sala, G. D., Dillen, J., Doering, D. T., Dommaraju, S. R., Durusu, S., Egbert, S., Ellerhorst, M., Faussurier, B., Fetter, A., Feuermann, M., Fewer, D. P., Foldi, J., Frediansyah, A., Garza, E. A., Gavriilidou, A., Gentile, A., Gerke, J., Gerstmans, H., Gomez-Escribano, J. P., González-Salazar, L. A., Grayson, N. E., Greco, C., Gris Gomez, J. E., Guerra, S., Flores, S. G., Gurevich, A., Gutiérrez-García, K., Hart, L., Haslinger, K., He, B., Hebra, T., Hemmann, J. L., Hindra, H., Höing, L., Holland, D. C., Holme, J. E., Horch, T., Hrab, P., Hu, J., Huynh, T. H., Hwang, J. Y., Iacovelli, R., Iftime, D., Iorio, M., Jayachandran, S., Jeong, E., Jing, J., Jung, J. J., Kakumu, Y., Kalkreuter, E., Kang, K. B., Kang, S., Kim, W., Kim, G. J., Kim, H., Kim, H. U., Klapper, M., Koetsier, R. A., Kollten, C., Kovács, Á. T., Kriukova, Y., Kubach, N., Kunjapur, A. M., Kushnareva, A. K., Kust, A., Lamber, J., Larralde, M., Larsen, N. J., Launay, A. P., Le, N. T. H., Lebeer, S., Lee, B. T., Lee, K., Lev, K. L., Li, S. M., Li, Y. X., Licona-Cassani, C., Lien, A., Liu, J., Lopez, J. A. V., Machushynets, N. V., Macias, M. I., Mahmud, T., Maleckis, M., Martinez-Martinez, A. M., Mast, Y., Maximo, M. F., McBride, C. M., McLellan, R. M., Bhatt, K. M., Melkonian, C., Merrild, A., Metsä-Ketelä, M., Mitchell, D. A., Müller, A. V., Nguyen, G. S., Nguyen, H. T., Niedermeyer, T. H. J., O’Hare, J. H., Ossowicki, A., Ostash, B. O., Otani, H., Padva, L., Paliyal, S., Pan, X., Panghal, M., Parade, D. S., Park, J., Parra, J., Rubio, M. P., Pham, H. T., Pidot, S. J., Piel, J., Pourmohsenin, B., Rakhmanov, M., Ramesh, S., Rasmussen, M. H., Rego, A., Reher, R., Rice, A. J., Rigolet, A., Romero-Otero, A., Rosas-Becerra, L. R., Rosiles, P. Y., Rutz, A., Ryu, B., Sahadeo, L. A., Saldanha, M., Salvi, L., Sánchez-Carvajal, E., Santos-Medellin, C., Sbaraini, N., Schoellhorn, S. M., Schumm, C., Sehnal, L., Selem, N., Shah, A. D., Shishido, T. K., Sieber, S., Silviani, V., Singh, G., Singh, H., Sokolova, N., Sonnenschein, E. C., Sosio, M., Sowa, S. T., Steffen, K., Stegmann, E., Streiff, A. B., Strüder, A., Surup, F., Svenningsen, T., Sweeney, D., Szenei, J., Tagirdzhanov, A., Tan, B., Tarnowski, M. J., Terlouw, B. R., Rey, T., Thome, N. U., Ortega, L. R. T., Tørring, T., Trindade, M., Truman, A. W., Tvilum, M., Udwary, D. W., Ulbricht, C., Vader, L., van Wezel, G. P., Walmsley, M., Warnasinghe, R., Weddeling, H. G., Weir, A. N. M., Williams, K., Williams, S. E., Witte, T. E., Wood Rocca, S. M., Yamada, K., Yang, D., Yang, D., Yu, J., Zhou, Z., Ziemert, N., Zimmer, L., Zimmermann, A., Zimmermann, C., van der Hooft, J. J. J., Linington, R. G., Weber, T. & Medema, M. H., 6 Jan 2025, In: Nucleic acids research. 53, D1, 13 p.

      Research output: Contribution to journal › Article › Academic › peer-review

      Open Access
      71 Citations (Scopus)

    • Prospective bioconversion of CO2 and CO into fine chemicals via halophilic purple phototrophic bacteria

      Stegman, S., Melkonian, C., Tamarit, D., Huang-Lin, E., Lebrero, R. & Cantera, S., Mar 2025, In: Reviews in Environmental Science and Biotechnology. 24, p. 29-41 13 p.

      Research output: Contribution to journal › Short survey › peer-review

      Open Access
    View all 11 research outputs

    • The Minimum Information about a Biosynthetic Gene Cluster (MIBiG) data repository

      Zdouc, M. M. (Creator), Blin, K. (Creator), Louwen, N. L. L. (Creator), Navarro, J. (Creator), Loureiro, C. (Creator), Bader, C. D. (Creator), Bailey, C. B. (Creator), Barra, L. (Creator), Booth, T. J. (Creator), Bozhüyük, K. A. J. (Creator), Cediel-Becerra, J. D. D. (Creator), Charlop-Powers, Z. (Creator), Chevrette, M. G. (Creator), Chooi, Y. H. (Creator), D’Agostino, P. M. (Creator), de Rond, T. (Creator), Pup, E. D. (Creator), Duncan, K. R. (Creator), Gu, W. (Creator), Hanif, N. (Creator), Helfrich, E. (Creator), Jenner, M. (Creator), Katsuyama, Y. (Creator), Korenskaia, A. (Creator), Krug, D. (Creator), Libis, V. (Creator), Lund, G. A. (Creator), Mantri, S. (Creator), Morgan, K. D. (Creator), Owen, C. (Creator), Phan, C. S. (Creator), Philmus, B. (Creator), Reitz, Z. (Creator), Robinson, S. L. (Creator), Singh, K. S. (Creator), Teufel, R. (Creator), Tong, Y. (Creator), Tugizimana, F. (Creator), Ulanova, D. (Creator), Winter, J. (Creator), Aguilar, C. (Creator), Akiyama, D. Y. (Creator), Al-Salihi, S. (Creator), Alanjary, M. (Creator), Alberti, F. (Creator), Aleti, G. (Creator), Alharthi, S. A. (Creator), Arias Rojo, M. Y. (Creator), Arishi, A. (Creator), Augustijn, H. E. (Creator), Avalon, N. E. (Creator), Avelar-Rivas, A. (Creator), Axt, K. K. (Creator), Barbieri, H. B. (Creator), Barbosa, J. C. J. (Creator), Segato, L. G. B. (Creator), Barrett, S. E. (Creator), Baunach, M. (Creator), Beemelmanns, C. (Creator), Beqaj, D. (Creator), Berger, T. (Creator), Bernaldo-Agüero, J. (Creator), Bettenbühl, S. M. (Creator), Bielinski, V. A. (Creator), Biermann, F. (Creator), Borges, R. M. (Creator), Borriss, R. (Creator), Breitenbach, M. (Creator), Bretscher, K. M. (Creator), Brigham, M. W. (Creator), Buedenbender, L. (Creator), Bulcock, B. W. (Creator), Cano-Prieto, C. (Creator), Capela, J. (Creator), Carrion, V. J. (Creator), Carter, R. S. (Creator), Castelo-Branco, R. (Creator), Castro-Falcón, G. (Creator), Chagas, F. O. (Creator), Charria-Girón, E. (Creator), Chaudhri, A. A. (Creator), Chaudhry, V. (Creator), Choi, H. (Creator), Choi, Y. (Creator), Choupannejad, R. (Creator), Chromy, J. (Creator), Chue Donahey, M. S. (Creator), Collemare, J. (Creator), Connolly, J. A. (Creator), Creamer, K. E. (Creator), Crüsemann, M. (Creator), Cruz, A. A. (Creator), Cumsille, A. (Creator), Dallery, J. F. (Creator), Damas-Ramos, L. C. (Creator), Damiani, T. (Creator), de Kruijff, M. (Creator), Martín, B. D. (Creator), Sala, G. D. (Creator), Dillen, J. (Creator), Doering, D. T. (Creator), Dommaraju, S. R. (Creator), Durusu, S. (Creator), Egbert, S. (Creator), Ellerhorst, M. (Creator), Faussurier, B. (Creator), Fetter, A. (Creator), Feuermann, M. (Creator), Fewer, D. P. (Creator), Foldi, J. (Creator), Frediansyah, A. (Creator), Garza, E. A. (Creator), Gavriilidou, A. (Creator), Gentile, A. (Creator), Gerke, J. (Creator), Gerstmans, H. (Creator), Gomez-Escribano, J. P. (Creator), González-Salazar, L. A. (Creator), Grayson, N. E. (Creator), Greco, C. (Creator), Gris Gomez, J. E. (Creator), Guerra, S. (Creator), Flores, S. G. (Creator), Gurevich, A. (Creator), Gutiérrez-García, K. (Creator), Hart, L. (Creator), Haslinger, K. (Creator), He, B. (Creator), Hebra, T. (Creator), Hemmann, J. L. (Creator), Hindra, H. (Creator), Höing, L. (Creator), Holland, D. C. (Creator), Holme, J. E. (Creator), Horch, T. (Creator), Hrab, P. (Creator), Hu, J. (Creator), Huynh, T. H. (Creator), Hwang, J. Y. (Creator), Iacovelli, R. (Creator), Iftime, D. (Creator), Iorio, M. (Creator), Jayachandran, S. (Creator), Jeong, E. (Creator), Jing, J. (Creator), Jung, J. J. (Creator), Kakumu, Y. (Creator), Kalkreuter, E. (Creator), Kang, K. B. (Creator), Kang, S. (Creator), Kim, W. (Creator), Kim, G. J. (Creator), Kim, H. (Creator), Kim, H. U. (Creator), Klapper, M. (Creator), Koetsier, R. A. (Creator), Kollten, C. (Creator), Kovács, Á. T. (Creator), Kriukova, Y. (Creator), Kubach, N. (Creator), Kunjapur, A. M. (Creator), Kushnareva, A. K. (Creator), Kust, A. (Creator), Lamber, J. (Creator), Larralde, M. (Creator), Larsen, N. J. (Creator), Launay, A. P. (Creator), Le, N. T. H. (Creator), Lebeer, S. (Creator), Lee, B. T. (Creator), Lee, K. (Creator), Lev, K. L. (Creator), Li, S. M. (Creator), Li, Y. X. (Creator), Licona-Cassani, C. (Creator), Lien, A. (Creator), Liu, J. (Creator), Lopez, J. A. V. (Creator), Machushynets, N. V. (Creator), Macias, M. I. (Creator), Mahmud, T. (Creator), Maleckis, M. (Creator), Martinez-Martinez, A. M. (Creator), Mast, Y. (Creator), Maximo, M. F. (Creator), McBride, C. M. (Creator), McLellan, R. M. (Creator), Bhatt, K. M. (Creator), Melkonian, C. (Creator), Merrild, A. (Creator), Metsä-Ketelä, M. (Creator), Mitchell, D. A. (Creator), Müller, A. V. (Creator), Nguyen, G. S. (Creator), Nguyen, H. T. (Creator), Niedermeyer, T. H. J. (Creator), O’Hare, J. H. (Creator), Ossowicki, A. (Creator), Ostash, B. O. (Creator), Otani, H. (Creator), Padva, L. (Creator), Paliyal, S. (Creator), Pan, X. (Creator), Panghal, M. (Creator), Parade, D. S. (Creator), Park, J. (Creator), Parra, J. (Creator), Rubio, M. P. (Creator), Pham, H. T. (Creator), Pidot, S. J. (Creator), Piel, J. (Creator), Pourmohsenin, B. (Creator), Rakhmanov, M. (Creator), Ramesh, S. (Creator), Rasmussen, M. H. (Creator), Rego, A. (Creator), Reher, R. (Creator), Rice, A. J. (Creator), Rigolet, A. (Creator), Romero-Otero, A. (Creator), Rosas-Becerra, L. R. (Creator), Rosiles, P. Y. (Creator), Rutz, A. (Creator), Ryu, B. (Creator), Sahadeo, L. A. (Creator), Saldanha, M. (Creator), Salvi, L. (Creator), Sánchez-Carvajal, E. (Creator), Santos-Medellin, C. (Creator), Sbaraini, N. (Creator), Schoellhorn, S. M. (Creator), Schumm, C. (Creator), Sehnal, L. (Creator), Selem, N. (Creator), Shah, A. D. (Creator), Shishido, T. K. (Creator), Sieber, S. (Creator), Silviani, V. (Creator), Singh, G. (Creator), Singh, H. (Creator), Sokolova, N. (Creator), Sonnenschein, E. C. (Creator), Sosio, M. (Creator), Sowa, S. T. (Creator), Steffen, K. (Creator), Stegmann, E. (Creator), Streiff, A. B. (Creator), Strüder, A. (Creator), Surup, F. (Creator), Svenningsen, T. (Creator), Sweeney, D. (Creator), Szenei, J. (Creator), Tagirdzhanov, A. (Creator), Tan, B. (Creator), Tarnowski, M. J. (Creator), Terlouw, B. R. (Creator), Rey, T. (Creator), Thome, N. U. (Creator), Ortega, L. R. T. (Creator), Tørring, T. (Creator), Trindade, M. (Creator), Truman, A. W. (Creator), Tvilum, M. (Creator), Udwary, D. W. (Creator), Ulbricht, C. (Creator), Vader, L. (Creator), van Wezel, G. P. (Creator), Walmsley, M. (Creator), Warnasinghe, R. (Creator), Weddeling, H. G. (Creator), Weir, A. N. M. (Creator), Williams, K. (Creator), Williams, S. E. (Creator), Witte, T. E. (Creator), Wood Rocca, S. M. (Creator), Yamada, K. (Creator), Yang, D. (Creator), Yang, D. (Creator), Yu, J. (Creator), Zhou, Z. (Creator), Ziemert, N. (Creator), Zimmer, L. (Creator), Zimmermann, A. (Creator), Zimmermann, C. (Creator), van der Hooft, J. J. J. (Creator), Linington, R. G. (Creator), Weber, T. (Creator) & Medema, M. H. (Creator), Wageningen University & Research, 15 Nov 2024

      DOI: 10.5281/zenodo.13367755

      Dataset