Aalt-Jan van Dijk

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Arabidopsis Medicine & Life Sciences

transcription factors Agriculture & Biology

Genes Chemical Compounds

genes Agriculture & Biology

Transcription Factors Medicine & Life Sciences

Gene Regulatory Networks Medicine & Life Sciences

Proteins Medicine & Life Sciences

MADS Domain Proteins Medicine & Life Sciences

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Research Output 2005 2019

54 Article
3 Abstract
3 Paper
3 Poster
8 More

2 Citations (Scopus)

An analysis of characterized plant sesquiterpene synthases

Durairaj, J., Di Girolamo, A., Bouwmeester, H. J., de Ridder, D., Beekwilder, J. & van Dijk, A. D. J., Feb 2019, In : Phytochemistry. 158, p. 157-165

Research output: Contribution to journal › Article › Academic › peer-review

Sesquiterpenes

sesquiterpenoids

terpenoids

Databases

Mutagenesis

1 Citation (Scopus)

Comprehensive phenotyping reveals interactions and functions of Arabidopsis thaliana TCP genes in yield determination

van Es, S. W., van der Auweraert, E., Rodrigues da Silveira, S., Angenent, G. C., van Dijk, A. D. J. & Immink, G. H., 22 Mar 2019, In : The Plant Journal.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Arabidopsis

seed yield

Arabidopsis thaliana

vegetative growth

phenotype

Designing Eukaryotic Gene Expression Regulation Using Machine Learning

de Jongh, R. P. H., van Dijk, A. D. J., Julsing, M. K., Schaap, P. J. & de Ridder, D., 17 Aug 2019, In : Trends in Biotechnology.

Research output: Contribution to journal › Review article › Academic › peer-review

Gene expression regulation

Gene Expression Regulation

Gene expression

Learning systems

Gene Expression

1 Citation (Scopus)

Improved inference of intermolecular contacts through protein–protein interaction prediction using coevolutionary analysis

Correa Marrero, M., Immink, G. H., de Ridder, D. & van Dijk, A. D. J., Jun 2019, In : Bioinformatics. 35, 12, p. 2036-2042 7 p.

Research output: Contribution to journal › Article › Academic › peer-review

Protein-protein Interaction

Contact

Proteins

Protein

Mutation

4 Citations (Scopus)

Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

Aerts, N., de Bruijn, S., van Mourik, H., Angenent, G. C. & van Dijk, A. D. J., 25 Jun 2018, In : BMC Plant Biology. 18, 1, 131.

Research output: Contribution to journal › Article › Academic › peer-review

Open Access

Arabidopsis thaliana

transcription factors

DNA-binding domains

protein binding

ecotypes

Datasets

Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators

Immink, R. (Creator), Posé, D. (Creator), Ferrario, S. I. T. (Creator), Ott, F. (Creator), Kaufmann, K. (Creator), Valentim, F. L. (Creator), de Folter, S. (Creator), van der Wal, F. (Creator), van Dijk, A. (Creator), Schmid, M. (Creator), Angenent, G. (Creator), Max Planck Institute for Developmental Biology, 31 Mar 2016

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE45846

Dataset

Transcription profiling by array of Arabidopsis thaliana wild type (Col-0) and flowering time mutants to investigate synchronized induction of flowering

Valentim, F. L. (Creator), van Mourik, S. (Creator), Posé, D. (Creator), Kim, M. C. (Creator), Schmid, M. (Creator), van Ham, R. C. H. J. (Creator), Busscher, M. (Creator), Sanchez Perez, G. F. (Creator), Immink, R. (Creator), van Dijk, A. (Creator), Wageningen UR, 1 Nov 2013

https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-4001/

Dataset

Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade

van Mourik, H. (Creator), van Dijk, A. (Creator), Stortenbeker, N. (Creator), Angenent, G. (Creator), Bemer, M. (Creator), Wageningen University & Research, 19 Dec 2017

DOI: 10.6084/m9.figshare.c.3958621

Dataset

Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

Aerts, N. (Creator), de Bruijn, S. A. (Creator), van Mourik, H. (Creator), Angenent, G. (Creator), van Dijk, A. (Creator), Wageningen University & Research, 25 Jun 2018

DOI: 10.6084/m9.figshare.c.4145045

Dataset

Activities 2010 2010

2 Public lecture/debate/seminar

Mutational robustness of gene regulatory networks: interpay between transcription factor - target gene and protein-protein interactions

Aalt-Jan van Dijk (Speaker)

1 Apr 2010 → …

Activity: Talk or presentation › Public lecture/debate/seminar

Modelling auxin-induced floral meristem patterning

S. van Mourik (Speaker), R. Merks (Speaker), A.D.J. van Dijk (Speaker), R. Immink (Speaker), K. Kaufmann (Speaker), G.C. Angenent (Speaker), J. Molenaar (Speaker)

2010

Activity: Talk or presentation › Public lecture/debate/seminar