Research Output 1907 2020

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2020

Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike-in standard

Zemb, O., Achard, C. S., Hamelin, J., De Almeida, M. L., Gabinaud, B., Cauquil, L., Verschuren, L. M. G. & Godon, J. J., 11 Jan 2020, In : MicrobiologyOpen. e977.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
rRNA Genes
Polymerase Chain Reaction
DNA
Feces
Open Access
Flavonols
Tea
flavanols
flavonols
phenolic acids

A desertification risk assessment decision support tool (DRAST)

Karavitis, C. A., Tsesmelis, D. E., Oikonomou, P. D., Kairis, O., Kosmas, C., Fassouli, V., Ritsema, C., Hessel, R., Jetten, V., Moustakas, N., Todorovic, B., Skondras, N. A., Vasilakou, C. G., Alexandris, S., Kolokytha, E., Stamatakos, D. V., Stricevic, R., Chatzigeorgiadis, E., Brandt, J., Geeson, N. & 1 others, Quaranta, G., 1 Apr 2020, In : Catena. 187, 104413.

Research output: Contribution to journalArticleAcademicpeer-review

desertification
risk assessment
land management
management practice
decision

Advances and challenges of life cycle assessment (LCA) of greenhouse gas removal technologies to fight climate changes

Goglio, P., Williams, A. G., Balta-Ozkan, N., Harris, N. R. P., Williamson, P., Huisingh, D., Zhang, Z. & Tavoni, M., 20 Jan 2020, In : Journal of Cleaner Production. 244, 118896.

Research output: Contribution to journalArticleAcademicpeer-review

Greenhouse gases
Climate change
Life cycle
greenhouse gas
life cycle

A framework for nitrogen futures in the shared socioeconomic pathways

Kanter, D. R., Winiwarter, W., Bodirsky, B. L., Bouwman, L., Boyer, E., Buckle, S., Compton, J. E., Dalgaard, T., de Vries, W., Leclère, D., Leip, A., Müller, C., Popp, A., Raghuram, N., Rao, S., Sutton, M. A., Tian, H., Westhoek, H., Zhang, X. & Zurek, M., 1 Mar 2020, In : Global Environmental Change. 61, 102029.

Research output: Contribution to journalArticleAcademicpeer-review

scenario
nitrogen
climate
narrative
economic impact

A global database for metacommunity ecology, integrating species, traits, environment and space

Jeliazkov, A., Mijatovic, D., Chantepie, S., Andrew, N., Arlettaz, R., Barbaro, L., Barsoum, N., Bartonova, A., Belskaya, E., Bonada, N., Brind’Amour, A., Carvalho, R., Castro, H., Chmura, D., Choler, P., Chong-Seng, K., Cleary, D., Cormont, A., Cornwell, W., de Campos, R. & 60 others, de Voogd, N., Doledec, S., Drew, J., Dziock, F., Eallonardo, A., Edgar, M. J., Farneda, F., Hernandez, D. F., Frenette-Dussault, C., Fried, G., Gallardo, B., Gibb, H., Gonçalves-Souza, T., Higuti, J., Humbert, J. Y., Krasnov, B. R., Saux, E. L., Lindo, Z., Lopez-Baucells, A., Lowe, E., Marteinsdottir, B., Martens, K., Meffert, P., Mellado-Díaz, A., Menz, M. H. M., Meyer, C. F. J., Miranda, J. R., Mouillot, D., Ossola, A., Pakeman, R., Pavoine, S., Pekin, B., Pino, J., Pocheville, A., Pomati, F., Poschlod, P., Prentice, H. C., Purschke, O., Raevel, V., Reitalu, T., Renema, W., Ribera, I., Robinson, N., Robroek, B., Rocha, R., Shieh, S. H., Spake, R., Staniaszek-Kik, M., Stanko, M., Tejerina-Garro, F. L., ter Braak, C., Urban, M. C., van Klink, R., Villéger, S., Wegman, R., Westgate, M. J., Wolff, J., Żarnowiec, J., Zolotarev, M. & Chase, J. M., 8 Jan 2020, In : Scientific Data. 7, 1, 6.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Ecology
ecology
Ecosystems
biodiversity
Ecosystem

Aligning biodiversity conservation and ecosystem services in spatial planning: Focus on ecosystem processes

Van der Biest, K., Meire, P., Schellekens, T., D'hondt, B., Bonte, D., Vanagt, T. & Ysebaert, T., 10 Apr 2020, In : Science of the Total Environment. 712, 136350.

Research output: Contribution to journalArticleAcademicpeer-review

Biodiversity
spatial planning
ecosystem service
Ecosystems
Conservation

An integrated physical and cost-benefit approach to assess groins as a coastal erosion mitigation strategy

Lima, M., Coelho, C., Veloso-Gomes, F. & Roebeling, P., 1 Mar 2020, In : Coastal Engineering. 156, 103614.

Research output: Contribution to journalArticleAcademicpeer-review

Jetties
Erosion
Costs
Economics
Economic analysis

An investment order tool to guide development of greenhouse horticulture for two specific regions

Blok, C., Leyh, R., Baeza Romero, E. J., van Os, E. A. & van der Salm, C., 1 Jan 2020, In : Acta Horticulturae. 1268, p. 27-34 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

horticulture
greenhouses
growers
Jordan
climate

Aphid resistance in Capsicum maps to a locus containing LRR-RLK gene analogues

Sun, M., Voorrips, R. E., van’t Westende, W., van Kaauwen, M., Visser, R. G. F. & Vosman, B., Jan 2020, In : Theoretical and Applied Genetics. 133, 1, p. 227-237

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Capsicum
Aphids
Aphidoidea
quantitative trait loci
loci

Application of the adaptive greenhouse concept in Lebanon

van Os, E. A., Baeza Romero, J. E., van der Salm, C., Jomaa, I., Tsafaras, I., El Skaf, S., El Haladi, D. & El Rifai, L., 2020, In : Acta Horticulturae. 1268, p. 35-42 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Lebanon
protected cultivation
greenhouses
water resources
water use efficiency

A review on yolk sac utilization in poultry

van der Wagt, I., de Jong, I. C., Mitchell, M. A., Molenaar, R. & van den Brand, H., 8 Feb 2020, In : Poultry Science.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
yolk sac
poultry
heat production
total solids
embryo (animal)

Assessing economic instruments to steer urban residential sprawl, using a hedonic pricing simulation modelling approach

Mendonça, R., Roebeling, P., Martins, F., Fidélis, T., Teotónio, C., Alves, H. & Rocha, J., Mar 2020, In : Land Use Policy. 92, 104458.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
property tax
economic instrument
pricing
residential development
urbanization

Assessing heavy metal pollution by biomonitoring honeybee nectar in Córdoba (Spain)

Gutiérrez, M., Molero, R., Gaju, M., van der Steen, J., Porrini, C. & Ruiz, J. A., 15 Jan 2020, In : Environmental Science and Pollution Research.

Research output: Contribution to journalArticleAcademicpeer-review

Plant Nectar
honeybee
Environmental Monitoring
nectar
biomonitoring

Assessment of the combined nitrate and nitrite exposure from food and drinking water: application of uncertainty around the nitrate to nitrite conversion factor

van den Brand, A. D., Beukers, M., Niekerk, M., van Donkersgoed, G., van der Aa, M., van de Ven, B., Bulder, A., van der Voet, H. & Sprong, C. R., 16 Jan 2020, In : Food Additives and Contaminants - Part A Chemistry, Analysis, Control, Exposure and Risk Assessment.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Nitrites
Drinking Water
Nitrates
nitrites
Uncertainty

Association mapping and genetic dissection of drought-induced canopy temperature differences in rice

Melandri, G., Prashar, A., Mccouch, S. R., Van Der Linden, G., Jones, H. G., Kadam, N., Jagadish, K., Bouwmeester, H., Ruyter-Spira, C. & Dhankher, O. (ed.), Feb 2020, In : Journal of Experimental Botany. 71, 4, p. 1614–1627 erz527.

Research output: Contribution to journalArticleAcademicpeer-review

Droughts
chromosome mapping
Dissection
drought
canopy
Open Access
agrochemicals
food safety
Netherlands
climate
prediction

Automated spider mite damage detection on tomato leaves in greenhouses

Nieuwenhuizen, A. T., Kool, J., Suh, H. K. & Hemming, J., 1 Jan 2020, In : Acta Horticulturae. 1268, p. 165-172 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Tetranychidae
tomatoes
cameras
greenhouses
leaves

Back to the future: rethinking socioecological systems underlying high nature value farmlands

Lomba, A., Moreira, F., Klimek, S., Jongman, R. H. G., Sullivan, C., Moran, J., Poux, X., Honrado, J. P., Pinto-Correia, T., Plieninger, T. & McCracken, D. I., Feb 2020, In : Frontiers in Ecology and the Environment. 18, 1, p. 36-42

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
farmland values
farming systems
agricultural land
low input agriculture
farming system

Barriers to restoration: soil acidity and phosphorus limitation constrain recovery of heathland plant communities after sod cutting

Vogels, J., Weijters, M., Bobbink, R., Bijlsma, R. J., Lamers, L. P. M., Verberk, W. C. E. P. & Siepel, H., Jan 2020, In : Applied Vegetation Science. 23, 1, p. 94-106

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
heathland
acidity
plant community
phosphorus
soil
Open Access
Toxoplasmosis
Toxoplasma gondii
Swine
swine
infection

Benefits and trade-offs of replacing synthetic fertilizers by animal manures in crop production in China: A meta-analysis

Zhang, X., Fang, Q., Zhang, T., Ma, W., Velthof, G. L., Hou, Y., Oenema, O. & Zhang, F., Feb 2020, In : Global Change Biology. 26, 2, p. 888-900

Research output: Contribution to journalArticleAcademicpeer-review

Manures
Fertilizers
meta-analysis
crop production
Crops

Benthic invertebrate and microbial biodiversity in sub-tropical urban rivers: Correlations with environmental variables and emerging chemicals

Peng, F. J., Pan, C. G., Zhang, N. S., ter Braak, C. J. F., Salvito, D., Selck, H., Ying, G. G. & Van den Brink, P. J., 20 Mar 2020, In : Science of the Total Environment. 709, 136281.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Biodiversity
invertebrate
Rivers
biodiversity
macroinvertebrate

Berekening grondstofefficiëntie geeft nuchtere kijk op plant factory : Ontbreken van 'gratis' zonlicht is zwakke punt vertical farm

Graamans, L., Heuvelink, E. & Kierkels, T., Jan 2020, In : Onder Glas. 17, 1, p. 44-45

Research output: Contribution to journalArticleProfessional

Open Access

Biochar promotes the reduction of N2O to N2 and concurrently suppresses the production of N2O in calcareous soil

Dong, W., Walkiewicz, A., Bieganowski, A., Oenema, O., Nosalewicz, M., He, C., Zhang, Y. & Hu, C., 15 Mar 2020, In : Geoderma. 362, 114091.

Research output: Contribution to journalArticleAcademicpeer-review

biochar
calcareous soil
calcareous soils
soil fertility
fertility
Open Access
Biodegradation
Potable water
Drinking Water
Activated carbon
Adsorption

Biodiversity and ecology of microorganisms in high pressure membrane filtration systems

de Vries, H. J., Stams, A. J. M. & Plugge, C. M., 1 Apr 2020, In : Water Research. 172, 115511.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Biodiversity
Ecology
Microorganisms
microorganism
biodiversity

Bioinformatics of edible yellow mealworm (Tenebrio molitor) proteome reveal the cuticular proteins as promising precursors of dipeptidyl peptidase-IV inhibitors

Dávalos Terán, I., Imai, K., Lacroix, I. M. E., Fogliano, V. & Udenigwe, C. C., Feb 2020, In : Journal of food biochemistry. 44, 2, e13121.

Research output: Contribution to journalArticleAcademicpeer-review

Tenebrio
Dipeptidyl-Peptidase IV Inhibitors
Tenebrio molitor
Proteome
proteome

Can dietary manipulations improve the productivity of pigs with lower environmental and economic cost? A global meta-analysis

Wang, H., Long, W., Chadwick, D., Velthof, G. L., Oenema, O., Ma, W., Wang, J., Qin, W., Hou, Y. & Zhang, F., 15 Feb 2020, In : Agriculture, Ecosystems and Environment. 289, 106748.

Research output: Contribution to journalArticleAcademicpeer-review

economic costs
meta-analysis
pig
excretion
productivity

Can greenhouse gases in breath be used to genetically improve feed efficiency of dairy cows?

Difford, G. F., Løvendahl, P., Veerkamp, R. F., Bovenhuis, H., Visker, M. H. P. W., Lassen, J. & de Haas, Y., 15 Jan 2020, In : Journal of Dairy Science. 103, 3, p. 2442-2459

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
greenhouse gases
feed conversion
dairy cows
Gases
Denmark

Can multi-use of the sea be safe? A framework for risk assessment of multi-use at sea

van Hoof, L., van den Burg, S. W. K., Banach, J. L., Röckmann, C. & Goossen, M., 1 Feb 2020, In : Ocean and Coastal Management. 184, 105030.

Research output: Contribution to journalArticleAcademicpeer-review

risk assessment process
stakeholders
risk assessment
safety
stakeholder
1 Citation (Scopus)

Can the presence of plantain (Plantago lanceolata L.) improve nitrogen cycling of dairy grassland systems on peat soils?

Pijlman, J., Berger, S. J., Lexmond, F., Bloem, J., van Groenigen, J. W., Visser, E. J. W., Erisman, J. W. & van Eekeren, N., Feb 2020, In : New Zealand Journal of Agricultural Research. 63, 1, p. 102-122

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plantago lanceolata
peat soils
peat soil
mesocosm
dairies
1 Citation (Scopus)

Carbon partitioning mechanisms in POTATO under drought stress

Aliche, E. B., Theeuwen, T. P. J. M., Oortwijn, M., Visser, R. G. F. & van der Linden, G., 1 Jan 2020, In : Plant Physiology and Biochemistry. 146, p. 211-219 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Droughts
water stress
Carbon
Solanum tuberosum
potatoes

Changing fish distributions challenge the effective management of European fisheries

Baudron, A. R., Brunel, T., Blanchet, M-A., Hidalgo, M., Chust, G., Brown, E. J., Kleisner, K. M., Millar, C., Mackenzie, B. R., Nikolioudakis, N., Fernandes, J. A. & Fernandes, P. G., 23 Jan 2020, In : Ecography. 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
fishery
fisheries
fish
Common Fisheries Policy
distribution

Characterization of goat prions demonstrates geographical variation of scrapie strains in Europe and reveals the composite nature of prion strains

Nonno, R., Marina Moreno, A., Espinosa, J. C., Fast, C., van Keulen, L. J. M., Spiropoulos, J., Lantier, I., Andrèoletti, O., Pirisinu, L., Di Bari, M. A., Aguilar-Calvo, P., Sklaviadis, T., Papasavva-Stylianou, P., Acutis, P. L., Acin, C., Bossers, A., Jacobs, J. G., Vaccari, G., D'Agostino, C., Chiappini, B. & 5 others, Lantier, F., Groschup, M. H., Agrimi, U., Torres, J. M. & Langeveld, J. P. M., 8 Jan 2020, In : Scientific Reports. 10, 1, 19.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
bovine spongiform encephalopathy
scrapie
prions
geographical variation
goats

Climate crop growth model: calculating the optimal growing strategy

Rajh Vilfan, N., Jan 2020, In : In Greenhouses : the international magazine for greenhouse growers. 2020 / 9 , 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Open Access

CO2 en belichting bij framboos in de winter

Janse, J., Jan 2020, In : Onder Glas. 17, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

1 Citation (Scopus)
Open Access
Peroxisome Proliferator-Activated Receptors
dose response
kinetics
Computer Simulation
food intake

Compositional turnover and variation in Eemian pollen sequences in Europe

Felde, V. A., Flantua, S. G. A., Jenks, C. R., Benito, B. M., de Beaulieu, J. L., Kuneš, P., Magri, D., Nalepka, D., Risebrobakken, B., ter Braak, C. J. F., Allen, J. R. M., Granoszewski, W., Helmens, K. F., Huntley, B., Kondratienė, O., Kalniņa, L., Kupryjanowicz, M., Malkiewicz, M., Milner, A. M., Nita, M. & 8 others, Noryśkiewicz, B., Pidek, I. A., Reille, M., Salonen, S., Šeirienė, V., Winter, H., Tzedakis, P. C. & Birks, J. B., Jan 2020, In : Vegetation History and Archaeobotany. 29, 1, p. 101-109 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Eemian
turnover
pollen
vegetation
Southern European region

Congresverslag deel 2: Meat for diversifying markets

Verkleij, T. J., Feb 2020, In : Voedingsindustrie : vakblad. 29, 1, p. 50-53

Research output: Contribution to journalArticleProfessional

Consequences of negative energy balance on follicular development and oocyte quality in primiparous sows

Costermans, N. G. J., Teerds, K. J., Middelkoop, A., Roelen, B. A. J., Schoevers, E. J., van Tol, H. T. A., Laurenssen, B. F. A., Koopmanschap, R. E., Zhao, Y., Blokland, M., van Tricht, E. F., Zak, L. J., Keijer, J., Kemp, B. & Soede, N. M., 14 Feb 2020, In : Biology of Reproduction. 102, 2, p. 388-398 ioz175.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Lactation
Oocytes
Somatomedins
Mental Competency
Steroids

Cost and effectiveness of in-season strategies for coping with weather variability in Pakistan's agriculture

Shah, H., Siderius, C. & Hellegers, P., 1 Feb 2020, In : Agricultural Systems. 178, 102746.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
coping strategies
Pakistan
weather
agriculture
cost effectiveness

Cost-effective management of coastal eutrophication: A case study for the yangtze river basin

Strokal, M., Kahil, T., Wada, Y., Albiac, J., Bai, Z., Ermolieva, T., Langan, S., Ma, L., Oenema, O., Wagner, F., Zhu, X. & Kroeze, C., 1 Mar 2020, In : Resources, Conservation and Recycling. 154, 104635.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
eutrophication
river basin
nutrient
cost
river

Creation of a new genus in the family Secoviridae substantiated by sequence variation of newly identified strawberry latent ringspot

Dullemans, A. M., Botermans, M., de Kock, M. J. D., de Krom, C. E., van der Lee, T. A. J., Roenhorst, J. W., Stulemeijer, I. J. E., Verbeek, M., Westenberg, M. & van der Vlugt, R. A. A., Jan 2020, In : Archives of Virology. 165, 1, p. 21-31 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fragaria
Viruses
Capsid Proteins
Genome
Lychnis
1 Citation (Scopus)

Cropland acidification increases risk of yield losses and food insecurity in China

Zhu, Q., Liu, X., Hao, T., Zeng, M., Shen, J., Zhang, F. & de Vries, W., Jan 2020, In : Environmental Pollution. 256, 113145.

Research output: Contribution to journalArticleAcademicpeer-review

Food Supply
Acidification
Fertilizers
China
Soil
1 Citation (Scopus)

Cross-national differences in child food neophobia: A comparison of five European countries

Proserpio, C., Almli, V. L., Sandvik, P., Sandell, M., Methven, L., Wallner, M., Jilani, H., Zeinstra, G. G., Alfaro, B. & Laureati, M., 1 Apr 2020, In : Food Quality and Preference. 81, 103861.

Research output: Contribution to journalArticleAcademicpeer-review

Food
food consumption
biscuits
vegetable consumption
fruit consumption

Cross-protection induced by a A/MAY/97 emergency vaccine against intra-serotype heterologous challenge with a foot-and-mouth disease virus from the A/ASIA/G-VII lineage

Dekker, A., Sanz-Bernardo, B., Singanallur, N. B., Ludi, A. B., Horsington, J., Eblé, P. L., King, D. P. & Vosloo, W., 14 Jan 2020, In : Vaccines. 8, 1, 24.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cross Protection
Foot-and-Mouth Disease Virus
Emergencies
Vaccines
Vaccine Potency
Open Access
Food Chain
bioaccumulation
food chain
plastics
monitoring
Dairies
Agriculture
dairy farming
Netherlands
Milk

Designing Eukaryotic Gene Expression Regulation Using Machine Learning

de Jongh, R. P. H., van Dijk, A. D. J., Julsing, M. K., Schaap, P. J. & de Ridder, D., Feb 2020, In : Trends in Biotechnology. 38, 2, p. 191-201

Research output: Contribution to journalArticleAcademicpeer-review

Gene expression regulation
Gene Expression Regulation
Gene expression
Learning systems
Gene Expression