Research Output 1988 2020

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2020

A global database for metacommunity ecology, integrating species, traits, environment and space

Jeliazkov, A., Mijatovic, D., Chantepie, S., Andrew, N., Arlettaz, R., Barbaro, L., Barsoum, N., Bartonova, A., Belskaya, E., Bonada, N., Brind’Amour, A., Carvalho, R., Castro, H., Chmura, D., Choler, P., Chong-Seng, K., Cleary, D., Cormont, A., Cornwell, W., de Campos, R. & 60 others, de Voogd, N., Doledec, S., Drew, J., Dziock, F., Eallonardo, A., Edgar, M. J., Farneda, F., Hernandez, D. F., Frenette-Dussault, C., Fried, G., Gallardo, B., Gibb, H., Gonçalves-Souza, T., Higuti, J., Humbert, J. Y., Krasnov, B. R., Saux, E. L., Lindo, Z., Lopez-Baucells, A., Lowe, E., Marteinsdottir, B., Martens, K., Meffert, P., Mellado-Díaz, A., Menz, M. H. M., Meyer, C. F. J., Miranda, J. R., Mouillot, D., Ossola, A., Pakeman, R., Pavoine, S., Pekin, B., Pino, J., Pocheville, A., Pomati, F., Poschlod, P., Prentice, H. C., Purschke, O., Raevel, V., Reitalu, T., Renema, W., Ribera, I., Robinson, N., Robroek, B., Rocha, R., Shieh, S. H., Spake, R., Staniaszek-Kik, M., Stanko, M., Tejerina-Garro, F. L., ter Braak, C., Urban, M. C., van Klink, R., Villéger, S., Wegman, R., Westgate, M. J., Wolff, J., Żarnowiec, J., Zolotarev, M. & Chase, J. M., 8 Jan 2020, In : Scientific Data. 7, 1, 6.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Ecology
ecology
Ecosystems
biodiversity
Ecosystem

Aphid resistance in Capsicum maps to a locus containing LRR-RLK gene analogues

Sun, M., Voorrips, R. E., van’t Westende, W., van Kaauwen, M., Visser, R. G. F. & Vosman, B., Jan 2020, In : Theoretical and Applied Genetics. 133, 1, p. 227-237

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Capsicum
Aphids
Aphidoidea
quantitative trait loci
loci

Berekening grondstofefficiëntie geeft nuchtere kijk op plant factory : Ontbreken van 'gratis' zonlicht is zwakke punt vertical farm

Graamans, L., Heuvelink, E. & Kierkels, T., Jan 2020, In : Onder Glas. 17, 1, p. 44-45

Research output: Contribution to journalArticleProfessional

Open Access
1 Citation (Scopus)

Carbon partitioning mechanisms in POTATO under drought stress

Aliche, E. B., Theeuwen, T. P. J. M., Oortwijn, M., Visser, R. G. F. & van der Linden, G., 1 Jan 2020, In : Plant Physiology and Biochemistry. 146, p. 211-219 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Droughts
water stress
Carbon
Solanum tuberosum
potatoes

Climate crop growth model: calculating the optimal growing strategy

Rajh Vilfan, N., Jan 2020, In : In Greenhouses : the international magazine for greenhouse growers. 2020 / 9 , 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Open Access

CO2 en belichting bij framboos in de winter

Janse, J., Jan 2020, In : Onder Glas. 17, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Compositional turnover and variation in Eemian pollen sequences in Europe

Felde, V. A., Flantua, S. G. A., Jenks, C. R., Benito, B. M., de Beaulieu, J. L., Kuneš, P., Magri, D., Nalepka, D., Risebrobakken, B., ter Braak, C. J. F., Allen, J. R. M., Granoszewski, W., Helmens, K. F., Huntley, B., Kondratienė, O., Kalniņa, L., Kupryjanowicz, M., Malkiewicz, M., Milner, A. M., Nita, M. & 8 others, Noryśkiewicz, B., Pidek, I. A., Reille, M., Salonen, S., Šeirienė, V., Winter, H., Tzedakis, P. C. & Birks, J. B., Jan 2020, In : Vegetation History and Archaeobotany. 29, 1, p. 101-109 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Eemian
turnover
pollen
vegetation
Southern European region

Creation of a new genus in the family Secoviridae substantiated by sequence variation of newly identified strawberry latent ringspot

Dullemans, A. M., Botermans, M., de Kock, M. J. D., de Krom, C. E., van der Lee, T. A. J., Roenhorst, J. W., Stulemeijer, I. J. E., Verbeek, M., Westenberg, M. & van der Vlugt, R. A. A., Jan 2020, In : Archives of Virology. 165, 1, p. 21-31 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fragaria
Viruses
Capsid Proteins
Genome
Lychnis

Development and evaluation of two TaqMan assays for generic detection of Dickeya species

Zijlstra, C., De Haas, L. G., Krijger, M., Verstappen, E., Warris, S., de Haan, E. & van der Wolf, J., Jan 2020, In : European Journal of Plant Pathology. 156, p. 311-316 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Dickeya
assays
DNA
Erwinia chrysanthemi
potatoes

Development of a refuge-kairomone device for monitoring and control of the vine weevil, Otiorhynchus sulcatus, by lure-and-kill and lure-and-infect

van Tol, R. W. H. M., Elberse, I. A. M. & Bruck, D. J., 1 Mar 2020, In : Crop Protection. 129, 105045.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Otiorhynchus sulcatus
kairomones
Curculionidae
vines
monitoring

Digitale tweeling van tomatengewas

de Visser, P. H. B., Jan 2020, In : Onder Glas. 17, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Efectos de poda y fertilización en los rendimientos de jatropha bajo condiciones de pequeños agricultores en un bosque seco tropical de ecuador

Translated title of the contribution: Pruning and fertilization effects on jatropha yieldunder smallholder’s conditions in a tropical dry forest from ecuadorCañadas-López, Á., Rade-Loor, D., Siegmund-Schultze, M., Vargas-Hernández, J. & Wehenkel, C., Jan 2020, In : Revista Facultad Nacional de Agronomia Medellin. 73, 1, p. 9089-9097 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Jatropha
Ecuador
pruning
dry forest
smallholder
1 Citation (Scopus)

Effects of strip width on yields in relay-strip intercropping: A simulation study

van Oort, P. A. J., Gou, F., Stomph, T. J. & van der Werf, W., 1 Jan 2020, In : European Journal of Agronomy. 112, 125936.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
intercropping
simulation
crop
crops
effect

Exotische vruchten uit Nederlandse kassen

Verkerke, W., Jan 2020, In : Onder Glas. 17, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Exploring nitrogen indicators of farm performance among farm types across several European case studies

Quemada, M., Lassaletta, L., Jensen, L. S., Godinot, O., Brentrup, F., Buckley, C., Foray, S., Hvid, S. K., Oenema, J., Richards, K. G. & Oenema, O., 1 Jan 2020, In : Agricultural Systems. 177, 102689.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
case studies
farms
nitrogen
surpluses
farmed animal species

Fusarium spp. in Loggerhead Sea Turtles (Caretta caretta): From Colonization to Infection

Cafarchia, C., Paradies, R., Figueredo, L. A., Iatta, R., Desantis, S., Di Bello, A. V. F., Zizzo, N. & van Diepeningen, A. D., Jan 2020, In : Veterinary Pathology. 57, 1, p. 139-146

Research output: Contribution to journalArticleAcademicpeer-review

Turtles
Caretta caretta
Fusarium
lesions (animal)
Infection

Green and White Asparagus (Asparagus officinalis): A Source of Developmental, Chemical and Urinary Intrigue

Pegiou, I., Mumm, R., Acharya, P., de Vos, C. H. & Hall, R. D., Jan 2020, In : Metabolites. 10, 1, 17.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Asparagus officinalis
asparagus spears
crops
flavor
pyrazines

Identification of bioactive phytochemicals in mulberries

D’urso, G., Mes, J. J., Montoro, P., Hall, R. D. & de Vos, R. C. H., 1 Jan 2020, In : Metabolites. 10, 1, 7.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Morus
Glucosidases
Phytochemicals
Antioxidants
Fruit

Influence of LED lighting on pests and natural predators

Kruidhof, H. M., Jan 2020, In : In Greenhouses : the international magazine for greenhouse growers. 2020 / 9, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Open Access
2 Citations (Scopus)

Invasion biology, ecology, and management of western flower thrips

Reitz, S. R., Gao, Y., Kirk, W. D. J., Hoddle, M. S., Leiss, K. A. & Funderburk, J. E., Jan 2020, In : Annual Review of Entomology. 65, p. 17-37 21 p.

Research output: Contribution to journalArticleAcademicpeer-review

thrips
Frankliniella occidentalis
flower
ecology
Biological Sciences
Open Access
drainage
uncertainty
irrigation
crop
irrigation management

Metabolic flux ratio analysis by parallel 13C labeling of isoprenoid biosynthesis in Rhodobacter sphaeroides

Orsi, E., Beekwilder, J., Peek, S., Eggink, G., Kengen, S. W. M. & Weusthuis, R. A., 1 Jan 2020, In : Metabolic Engineering. 57, p. 228-238 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Metabolic Flux Analysis
Rhodobacter sphaeroides
Biosynthesis
Terpenes
Labeling

Methodological choices drive differences in environmentally-friendly dietary solutions

Frehner, A., Muller, A., Schader, C., De Boer, I. J. M. & Van Zanten, H. H. E., 1 Mar 2020, In : Global Food Security. 24, 100333.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
animal-based foods
food
Food
Animals
animal

Met virtual reality naar het gewas kijken

Balendonck, J., Jan 2020, In : Onder Glas. 17, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Open Access

Morphological and physiological responses of the potato stem transport tissues to dehydration stress

Aliche, E. B., Prusova-Bourke, A., Ruiz-Sanchez, M., Oortwijn, M., Gerkema, E., Van As, H., Visser, R. G. F. & van der Linden, C. G., 8 Jan 2020, In : Planta. 251, 2, 45.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Xylem
desiccation (plant physiology)
Solanum tuberosum
Dehydration
plant response

New method of measuring shelf life of tomatoes

de Jong, R., Jan 2020, In : In Greenhouses : the international magazine for greenhouse growers. 2020 / 9 , 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Open Access

Optimisation of droplet digital PCR for determining copy number variation of α-gliadin genes in mutant and gene-edited polyploid bread wheat

Jouanin, A., Tenorio-Berrio, R., Schaart, J. G., Leigh, F., Visser, R. G. F. & Smulders, M. J. M., Mar 2020, In : Journal of Cereal Science. 92, 102903.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gliadin
Polyploidy
gliadin
Bread
polyploidy

Reciprocal cybrids reveal how organellar genomes affect plant phenotypes

Flood, P. J., Theeuwen, T. P. J. M., Schneeberger, K., Keizer, P., Kruijer, W., Severing, E., Kouklas, E., Hageman, J. A., Wijfjes, R., Calvo-Baltanas, V., Becker, F. F. M., Schnabel, S. K., Willems, L. A. J., Ligterink, W., Van Arkel, J., Mumm, R., Gualberto, J. M., Savage, L., Kramer, D. M., Keurentjes, J. J. B. & 5 others, Van Eeuwijk, F., Koornneef, M., Harbinson, J., Aarts, M. G. M. & Wijnker, E., 1 Jan 2020, In : Nature Plants. 6, 1, p. 13-21

Research output: Contribution to journalArticleAcademicpeer-review

cybrids
phenotype
haploidy
genome
chloroplast DNA

Revisiting the Role of Master Regulators in Tomato Ripening

Wang, R., Angenent, G. C., Seymour, G. & de Maagd, R. A., 8 Jan 2020, In : Trends in Plant Science.

Research output: Contribution to journalArticleAcademicpeer-review

mutagenesis
ripening
tomatoes
needs assessment
gene targeting

Seed stored mRNAs that are specifically associated to monosome are translationally regulated during germination

Bai, B., Van Der Horst, S., Cordewener, J., America, T., Hanson, J. & Bentsink, L., 6 Jan 2020, In : Plant Physiology. 182, 1, p. 378-392

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Stored Messenger RNA
Germination
Seeds
germination
seeds

Testing plastics for vapours harmful to plants

van Os, E. A., Jan 2020, In : In Greenhouses : the international magazine for greenhouse growers. 2020 / 9, 1, p. 43-43

Research output: Contribution to journalArticleProfessional

Open Access

The ability to manipulate ROS metabolism in pepper may affect aphid virulence

Sun, M., Voorrips, R. E., van Kaauwen, M., Visser, R. G. F. & Vosman, B., 1 Jan 2020, In : Horticulture Research. 7, 1, 6.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Aphids
sweet peppers
Metabolism
Virulence
Aphidoidea

Weekly defoliation controls, but does not kill broad‐leaved dock (Rumex obtusifolius)

Evert, F. K., Cockburn, M., Beniers, J. E. & Latsch, R., 22 Jan 2020, In : Weed Research. 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Rumex obtusifolius
defoliation
pastures
grasses
plant growth

Wheat bran addition improves Ceriporiopsis subvermispora and Lentinula edodes growth on wheat straw, but not delignification

Mao, L., Cone, J. W., Hendriks, W. H. & Sonnenberg, A. S. M., 1 Jan 2020, In : Animal Feed Science and Technology. 259, 114361.

Research output: Contribution to journalArticleAcademicpeer-review

Ceriporiopsis subvermispora
delignification
Lentinula edodes
wheat bran
wheat straw
2019

Acquisition and regeneration of Spinacia turkestanica Iljin and S. tetrandra Steven ex M. Bieb. to improve a spinach gene bank collection

van Treuren, R., de Groot, E. C., Kik, C., Hisoriev, H., Khassanov, F., Farzaliyev, V., Melyan, G., Soest, L. J. M., Tulmans, C., de Visser, J., Kimura, R., Boshoven, J. C., Kanda, T., Goossens, R., Verhoef, M. & Dijkstra, J., 13 Jun 2019, In : Genetic Resources and Crop Evolution. 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Spinacia
gene banks
Spinacia oleracea
spinach
Regeneration

Adding silicon to nutrient solution is worth considering

Heuvelink, E. & Voogt, W., Jan 2019, In : In Greenhouses : the international magazine for greenhouse growers. 8, 1, p. 16-17

Research output: Contribution to journalArticleProfessional

Open Access
2 Citations (Scopus)

A Field-Scale Decision Support System for Assessment and Management of Soil Functions

Debeljak, M., Trajanov, A., Kuzmanovski, V., Schroder, J. J., Sandén, T., Spiegel, H., Wall, D., van de Broek, M., Rutgers, M., Bampa, F., Creamer, R. & Henriksen, C. B., 5 Aug 2019, In : Frontiers in Environmental Science. 7, 115.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
decision support system
soil
farm
sustainability
soil function
2 Citations (Scopus)

A flexible semi-empirical model for estimating ammonia volatilization from field-applied slurry

Hafner, S. D., Pacholski, A., Bittman, S., Carozzi, M., Chantigny, M., Génermont, S., Häni, C., Hansen, M. N., Huijsmans, J., Kupper, T., Misselbrook, T., Neftel, A., Nyord, T. & Sommer, S. G., 1 Feb 2019, In : Atmospheric Environment. 199, p. 474-484

Research output: Contribution to journalArticleAcademicpeer-review

volatilization
slurry
ammonia
spreadsheet
pig

A Generically Parameterized model of Lake eutrophication (GPLake) that links field-, lab- and model-based knowledge

Chang, M., Teurlincx, S., DeAngelis, D. L., Janse, J. H., Troost, T. A., van Wijk, D., Mooij, W. M. & Janssen, A. B. G., 10 Dec 2019, In : Science of the Total Environment. 695, 133887.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Eutrophication
Lakes
eutrophication
lake
Nutrients

A genetical metabolomics approach for bioprospecting plant biosynthetic gene clusters

Witjes, L., Kooke, R., van der Hooft, J. J. J., de Vos, R. C. H., Keurentjes, J. J. B., Medema, M. H. & Nijveen, H., 2 Apr 2019, In : BMC Research Notes. 12, 1, 194.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant Genes
Metabolomics
Multigene Family
Genes
Metabolites

Agent-based modelling of socio-ecological systems: Models, projects and ontologies

Gotts, N. M., van Voorn, G. A. K., Polhill, J. G., de Jong, E., Edmonds, B., Hofstede, G. J. & Meyer, R., Dec 2019, In : Ecological Complexity. 40, B, 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

modeling
project
transparency
analysis
Open Access
Panama
Musa
bananas
genotyping
assays

A low proportion of rare bacterial taxa responds to abiotic changes compared with dominant taxa

Kurm, V., Geisen, S. & Gera Hol, W. H., Feb 2019, In : Environmental Microbiology. 21, 2, p. 750-758

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
insurance
Insurance
Ecosystem
Soil
disturbance
3 Citations (Scopus)

Alstroemeria yellow spot virus (AYSV): a new orthotospovirus species within a growing Eurasian clade

Hassani-Mehraban, A., Dullemans, A. M., Verhoeven, J. T. J., Roenhorst, J. W., Peters, D., van der Vlugt, R. A. A. & Kormelink, R., Jan 2019, In : Archives of Virology. 164, 1, p. 117–126

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Alstroemeria
Viruses
Thysanoptera
Nucleotides
Polygonum

Alternative Oxidase (AOX) Senses Stress Levels to Coordinate Auxin-Induced Reprogramming From Seed Germination to Somatic Embryogenesis—A Role Relevant for Seed Vigor Prediction and Plant Robustness

Mohanapriya, G., Bharadwaj, R., Noceda, C., Costa, J. H., Kumar, S. R., Sathishkumar, R., Thiers, K. L. L., Santos Macedo, E., Silva, S., Annicchiarico, P., Groot, S. P. C., Kodde, J., Kumari, A., Gupta, K. J. & Arnholdt-Schmitt, B., 20 Sep 2019, In : Frontiers in Plant Science. 10, 1134.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
vigor
auxins
seed germination
somatic embryogenesis
prediction
Open Access
Dairies
grazing
grass
innovation
Innovation

A methodology for estimating the ammonia emission from crop residues at a national scale

de Ruijter, F. J. & Huijsmans, J. F. M., Apr 2019, In : Atmospheric Environment: X. 2, 100028.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
crop residue
volatilization
ammonia
methodology
crop
4 Citations (Scopus)

A MYB Triad Controls Primary and Phenylpropanoid Metabolites for Pollen Coat Patterning

Battat, M., Eitan, A., Rogachev, I., Hanhineva, K., Fernie, A., Tohge, T., Beekwilder, J. & Aharoni, A., 1 May 2019, In : Plant Physiology. 180, 1, p. 87-108 22 p.

Research output: Contribution to journalArticleAcademicpeer-review

Petunia
phenylpropanoids
Pollen
Arabidopsis
pollen
1 Citation (Scopus)

An Alternative Bioassay for Synchytrium endobioticum Demonstrates the Expression of Potato Wart Resistance in Aboveground Plant Parts

van de Vossenberg, B. T. L. H., van Gent-Pelzer, M. P. E., Boerma, M., van der Gouw, L. P., van der Lee, T. A. J. & Vossen, J. H., 10 May 2019, In : Phytopathology. 109, 6, p. 1043-1052 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Synchytrium endobioticum
warts
plant anatomy
bioassays
potatoes
3 Citations (Scopus)

An analysis of characterized plant sesquiterpene synthases

Durairaj, J., Di Girolamo, A., Bouwmeester, H. J., de Ridder, D., Beekwilder, J. & van Dijk, A. D. J., Feb 2019, In : Phytochemistry. 158, p. 157-165

Research output: Contribution to journalArticleAcademicpeer-review

Sesquiterpenes
sesquiterpenoids
terpenoids
Databases
Mutagenesis