Research Output 1971 2020

2016
32 Citations (Scopus)

A Review of SHV Extended-Spectrum β-Lactamases: Neglected Yet Ubiquitous

Liakopoulos, A., Mevius, D. J. & Ceccarelli, D., 2016, In : Frontiers in Microbiology. 7, 27 p., 1374.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Enterobacteriaceae
Enterobacteriaceae Infections
Monobactams
Penicillinase
Lactams
42 Citations (Scopus)

Bacterial zoonoses transmitted by Household pets: State of the Art and Future perspectives for targeted research and policy actions

Damborg, P., Broens, E. M., Chomel, B. B., Guenther, S., Pasmans, F., Wagenaar, J. A., Weese, J. S., Wieler, L. H., Windahl, U., Vanrompay, D. & Guardabassi, L., Jul 2016, In : Journal of Comparative Pathology. 155, 1 (suppl 1), p. S27-S40

Research output: Contribution to journalArticleAcademicpeer-review

Pets
Zoonoses
zoonoses
pets
households
3 Citations (Scopus)

Balance of RNA sequence requirement and NS3/NS3a expression of segment 10 of orbiviruses

Feenstra, F., Van Gennip, R. G. P., Schreuder, M. & van Rijn, P. A., 2016, In : Journal of General Virology. 97, 2, p. 411-421

Research output: Contribution to journalArticleAcademicpeer-review

Orbivirus
Bluetongue virus
Virus Release
Insects
Tropism
9 Citations (Scopus)

Budded baculovirus particle structure revisited

Wang, Q., Bosch, B. J., Vlak, J. M., van Oers, M. M., Rottier, P. J. & van Lent, J. W. M., 2016, In : Journal of Invertebrate Pathology. 134, p. 15-22

Research output: Contribution to journalArticleAcademicpeer-review

nucleocapsid
Baculoviridae
Spodoptera exigua multiple nucleopolyhedrovirus
electron microscopy
Autographa californica multiple nucleopolyhedrovirus
1 Citation (Scopus)

Building pathway graphs from BioPAX data in R

Benis, N., Schokker, D., Kramer, F., Smits, M. & Suarez-Diez, M., 2016, In : F1000 Research. 5, 13 p., 2414.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Information Services
Information Storage and Retrieval
Language
Data structures
Data storage equipment
10 Citations (Scopus)

Campylobacter fetus subspecies contain conserved type IV secretion systems on multiple genomic islands and plasmids

Van Der Graaf-Van Bloois, L., Miller, W. G., Yee, E., Wagenaar, J. A., Gorkiewisz, G., Forbes, K. J., Zomer, A. & Duim, B., 2016, In : PLoS ONE. 11, 4, e0152832.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Campylobacter fetus
genomic islands
Genomic Islands
plasmids
Plasmids
10 Citations (Scopus)

Can Immune Response Mechanisms Explain the Fecal Shedding Patterns of Cattle Infected with Mycobacterium avium Subspecies paratuberculosis?

Gesham, M., Shigetoshi, E. & Koets, A. P., 2016, In : PLoS ONE. 11, e0146844.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Mycobacterium avium subsp. paratuberculosis
Mycobacterium avium
paratuberculosis
immune response
Animals
20 Citations (Scopus)

Changes in the population of methicillin-resistant Staphylococcus pseudintermedius and dissemination of antimicrobial-resistant phenotypes in the Netherlands

Duim, B., Verstappen, K. M., Broens, E. M., Laarhoven, L. M., Van Duijkeren, E., Hordijk, J., De Heus, P., Spaninks, M., Timmerman, A. J. & Wagenaar, J. A., 2016, In : Journal of Clinical Microbiology. 54, 2, p. 283-288

Research output: Contribution to journalArticleAcademicpeer-review

Methicillin Resistance
Staphylococcus
Netherlands
Phenotype
Population
3 Citations (Scopus)

Characterization of a Novel lsa (E)- and lnu (B)-Carrying Structure Located in the Chromosome of a Staphylococcus aureus Sequence Type 398 Strain: Letter to the editor

Sarrou, S., Liakopoulos, A., Tsoumani, K., Sagri, E., Mathiopoulos, K. D., Tzouvelekis, L. S., Miriagou, V. & Petinaki, E., Feb 2016, In : Antimicrobial Agents and Chemotherapy. 60, 2, p. 1164-1166

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)
Porcine respiratory and reproductive syndrome virus
Porcine reproductive and respiratory syndrome virus
Virulence
virulence
Swine

Chemical and physical hazards in the dairy chain

van Asselt, E. D., Marvin, H. J. P., Boon, P. E., Swanenburg, M., Zeilmaker, M., Mengelers, M. J. B. & van der Fels-Klerx, H. J., 2016, Wageningen: RIKILT Wageningen UR. 43 p. (RIKILT report; no. 2016.003)

Research output: Book/ReportReportProfessional

Open Access
6 Citations (Scopus)

Chicken immune response after in ovo Immunization with Chimeric TLR5 activating flagellin of campylobacter jejuni

Radomska, K. A., Vaezirad, M. M., Verstappen, K. M., Wösten, M. M. S. M., Wagenaar, J. A. & van Putten, J. P. M., 2016, In : PLoS ONE. 11, 10, e0164837.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Immunization
Flagellin
flagellin
Campylobacter jejuni
Subunit Vaccines
13 Citations (Scopus)

Chromosome-Based bla oxa-48-Like Variants in Shewanella Species Isolates from Food-Producing Animals, Fish, and the Aquatic Environment

Ceccarelli, D., van Essen-Zandbergen, A., Veldman, K. T., Tafro, N., Haenen, O. L. M. & Mevius, D. J., 14 Nov 2016, In : Antimicrobial Agents and Chemotherapy. 61, 2, e01013-16.

Research output: Contribution to journalArticleAcademicpeer-review

Shewanella
Fishes
Chromosomes
Food
Interspersed Repetitive Sequences
4 Citations (Scopus)

Circulation of Schmallenberg virus in Turkey, 2013

Tonbak, S., Azkur, A. K., Pestil, Z., Biyikli, E., Abayli, H., Baydar, E., van der Poel, W. H. M. & Bulut, H., 2016, In : Turkish Journal of Veterinary and Animal Sciences. 40, 2, p. 175-180

Research output: Contribution to journalArticleAcademicpeer-review

Turkey
Turkey (country)
Viruses
Real-Time Polymerase Chain Reaction
reverse transcriptase polymerase chain reaction
4 Citations (Scopus)
Rift Valley fever virus
Viruses
Virus Diseases
Dexamethasone
Viremia
5 Citations (Scopus)

Colonization of Enteroaggregative Escherichia coli and Shiga toxin-producing Escherichia coli in chickens and humans in southern Vietnam

Trung, N. V., Nhung, H. N., Carrique-Mas, J. J., Mai, H. H., Tuyen, H. T., Campbell, J., Nhung, N. T., Van Minh, P., Wagenaar, J. A., Mai, N. T. N., Hieu, T. Q., Schultsz, C. & Hoa, N. T., 2016, In : BMC Microbiology. 16, 1, 208.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Shiga-Toxigenic Escherichia coli
Vietnam
Chickens
Escherichia coli
Genes
8 Citations (Scopus)

Companion Animals as a Source of Viruses for Human Beings and Food Production Animals

Reperant, L. A., Brown, I. H., Haenen, O. L. M., de Jong, M. D., Osterhaus, A. D. M. E., Papa, A., Rimstad, E., Valarcher, J. F. & Kuiken, T., 2016, In : Journal of Comparative Pathology. 155, 1, p. S41-S53

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
vertebrate viruses
Pets
animal production
pets
Viruses
15 Citations (Scopus)

Comparative Genomics of Campylobacter fetus from Reptilesand Mammals Reveals Divergent Evolution in Host-Associated Lineages

Gilbert, M. J., Miller, W. G., Yee, E., Zomer, A., Van Der Graaf-Van Bloois, L., Fitzgerald, C., Forbes, K. J., Méric, G., Sheppard, S., Wagenaar, J. A. & Duim, B., 2016, In : Genome Biology and Evolution. 8, 6, p. 2006-2019

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Campylobacter fetus
divergent evolution
Genomics
reptile
Mammals
6 Citations (Scopus)

Comparative genomics of campylobacter iguaniorum to unravel genetic regions associated with reptilian hosts

Gilbert, M. J., Miller, W. G., Yee, E., Kik, M., Zomer, A. L., Wagenaar, J. A. & Duim, B., 2016, In : Genome Biology and Evolution. 8, 9, p. 3022-3029

Research output: Contribution to journalArticleAcademicpeer-review

Campylobacter
Genomics
reptile
fetus
Iguana iguana
1 Citation (Scopus)

Construction and Application of Newcastle Disease Virus-Based Vector Vaccines

Wichgers Schreur, P. J., 2016, Vaccine Technologies for Veterinary Viral Diseases. Brun, A. (ed.). Springer, p. 225-237 (Methodes in Molecular Biology; no. 1349).

Research output: Chapter in Book/Report/Conference proceedingChapter

Newcastle disease virus
Vaccines
Heterophile Antigens
Humoral Immunity
Cellular Immunity

Consumption of antimicrobial agents and antimicrobial resistance among medically important bacteria in The Netherlands in 2015: NethMap 2016

de Greeff, S. C. (ed.), Mouton, J. W. (ed.), Schoffelen, A. F. (ed.), Melles, D. C. (ed.), Mevius, D. J. (ed.) & Natsch, S. (ed.), 2016, Bergen: Dutch Foundation of the Working Party on Antibiotic Policy (SWAB). 140 p.

Research output: Book/ReportReportProfessional

Open Access

Data collection for risk assessments on animal health (DACRAH)

de Vos-de Jong, C. J., 2016, CoVetlab consortium. 191 p.

Research output: Book/ReportReportProfessional

24 Citations (Scopus)

Decision-making for foot-and-mouth disease control: Objectives matter

Probert, W. J. M., Shea, K., Fonnesbeck, C. J., Runge, M. C., Carpenter, T. E., Dürr, S., Garner, M. G., Harvey, N., Stevenson, M. A., Webb, C. T., Werkman, M., Tildesley, M. J. & Ferrari, M. J., 2016, In : Epidemics. 15, p. 10-19

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Foot-and-Mouth Disease
Disease Outbreaks
Decision Making
Administrative Personnel

Delineating spatio-temporal processes in the gut mucosa of pigs

Hulsegge, B., Rebel, J. M. J., Schokker, D. & Smits, M. A., 2016, Book of Abstracts of the 67th Annual Meeting of the European Federation of Animal Science: EAAP – 67th Annual Meeting, Belfast 201. Wageningen: Wageningen Academic Publishers, p. 542-542 (Book of abstracts; no. 22).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access
24 Citations (Scopus)

Detection of the plasmid-mediated colistin-resistance gene mcr-1 in clinical isolates and stool specimens obtained from hospitalized patients using a newly developed real-time PCR assay

Nijhuis, R. H. T., Veldman, K. T., Schelfaut, J., Van Essen-Zandbergen, A., Wessels, E., Claas, E. C. J. & Gooskens, J., 2016, In : Journal of Antimicrobial Chemotherapy. 71, 8, p. 2344-2346

Research output: Contribution to journalArticleAcademic

5 Citations (Scopus)

Development and validation of a real-time PCR assay for the detection of anguillid herpesvirus 1

van Beurden, S. J., Voorbergen-Laarman, H. A., Roozenburg-Hengst, R. E. M., van Tellingen, J., Haenen, O. L. M. & Engelsma, M. Y., Jan 2016, In : Journal of Fish Diseases. 39, 1, p. 95-104

Research output: Contribution to journalArticleAcademicpeer-review

Herpesviridae
Eels
Anguilla anguilla
Real-Time Polymerase Chain Reaction
Anguilla
3 Citations (Scopus)

Diel activity and preferred landing sites in Culicoides biting midges attacking Fjord horses

Elbers, A. R. W., van den Heuvel, S. J. & Meiswinkel, R., 25 Mar 2016, In : Entomologia Experimentalis et Applicata. 160, p. 272-280

Research output: Contribution to journalArticleAcademicpeer-review

diel activity
Culicoides
Ceratopogonidae
horse
fjord
5 Citations (Scopus)

Diurnal differences in milk composition and its influence on in vitro growth of Staphylococcus aureus and Escherichia coli in bovine quarter milk

Eisenberg, S. W. F., Boerhout, E. M., Ravesloot, L., Daemen, A. J. J. M., Benedictus, L., Rutten, V. P. M. G. & Koets, A. P., 2016, In : Journal of Dairy Science. 99, 7, p. 5690-5700

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
milk composition
Staphylococcus aureus
Milk
Escherichia coli
milk
50 Citations (Scopus)

Diversity of STs, plasmids and ESBL genes among Escherichia coli from humans, animals and food in Germany, the Netherlands and the UK

Day, M. J., Rodríguez, I., van Essen-Zandbergen, A., Dierikx, C., Kadlec, K., Schink, A. K., Wu, G., Chattaway, M. A., DoNascimento, V., Wain, J., Helmuth, R., Guerra, B., Schwarz, S., Threlfall, J., Woodward, M. J., Coldham, N., Mevius, D. & Woodford, N., 2016, In : Journal of Antimicrobial Chemotherapy. 71, 5, p. 1178-1182 dkv485.

Research output: Contribution to journalArticleAcademicpeer-review

Netherlands
Germany
Plasmids
Escherichia coli
Food

Effect of dietary proteins on immunity and metabolism in mice

Kar, S. K., Kruijt, L., Jansman, A. J. M. & Smits, M. A., 2016, Energy and protein Metabolism and Nutrition. Skomial, J. & Lapierre, H. (eds.). Wageningen Academic Publishers, p. 175-175 (EAAP publication; no. 137).

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Effect of nutritional interventions with quercetin, oat hulls, β-glucans, lysozyme, and fish oil on immune competence related parameters of adult broiler

van Krimpen, M. M., Torki, M., Schokker, D., Lensing, M., Vastenhouw, S., de Bree, F. M., Bossers, A., de Bruijn, N., Jansman, A. J. M., Rebel, J. M. J. & Smits, M. A., Sep 2016, Wageningen: Wageningen Livestock Research. 50 p. (Wageningen Livestock Research report; no. 977)

Research output: Book/ReportReportProfessional

Open Access
nutritional intervention
immunocompetence
glucans
lysozyme
fish oils

Effects of a high level of dietary zinc as model intervention on intestinal microbiota and mucosal gene expression in piglets

Jansman, A. J. M., Schokker, D., Gerritsen, R., de Bree, F., Hulst, M. M. & Smits, M. A., 2016, Wageningen: Wageningen Livestock Research. 37 p. (Wageningen Livestock Research rapport; no. 1000)

Research output: Book/ReportReportProfessional

Open Access

Effects of a high level of dietary zinc over different post weaning periods on intestinal microbiota and mucosal gene expression in piglets

Jansman, A. J. M., Schokker, D., Gerritsen, R., Willems, E., de Bree, F., Dekker, R. A. & Smits, M. A., 2016, Wageningen: Wageningen Livestock Research. 48 p. (Wageningen Livestock Research rapport; no. 1001)

Research output: Book/ReportReportProfessional

Open Access

Effects of dietary protein sources on intestinal and systemic responses of pigs

Kar, S. K., Jansman, A. J. M., Schokker, D., Kruijt, L. & Smits, M. A., 2 Sep 2016, p. 544. 1 p.

Research output: Contribution to conferenceAbstractAcademic

4 Citations (Scopus)

Effects of digested onion extracts on intestinal gene expression: an interspecies comparison using different intestine models

de Wit, N. J. W., Hulst, M. M., Govers, C. C. F. M., van der Meulen, J., van Hoef, A. M. A., Stoopen, G. M., Hamers, A. R. M., Hoekman, A. J. W., de Vos, C. H., Bovee, T. F. H., Smits, M. A., Mes, J. J. & Hendriksen, P. J. M., 15 Sep 2016, In : PLoS ONE. 11, 9, 18 p., e0160719.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Onions
Gene expression
onions
Intestines
intestines

Effects of rye inclusion in diets on broiler performance, gut morphology and microbiota composition

van Krimpen, M. M., Torki, M., Borgijink, S. M., Schokker, D., Vastenhouw, S. A., de Bree, F. M., Bossers, A., Fabri, T., de Bruijn, N., Jansman, A. J. M., Rebel, J. M. J., Smits, M. A. & van Emous, R. A., 20 Jun 2016, p. 65. 1 p.

Research output: Contribution to conferenceAbstractAcademic

rye
digestive system
broiler chickens
diet
digesta
1 Citation (Scopus)

Emergency deployment of genetically engineered veterinary vaccines in Europe

Ramezanpour, B., de Foucauld, J. & Kortekaas, J., 2016, In : Vaccine. 34, 30, p. 3435-3440

Research output: Contribution to journalArticleAcademicpeer-review

Emergencies
Vaccines
vaccines
Education
replicon

Emerging zoonoses in relation to the changing socio-economic environment

de Vos-de Jong, C. J., Swanenburg, M., de Boer, W. F., Vaandrager, L., Hogeveen, H., Bergevoet, R. H. M., van der Poel, W. H. M., Kaat, C., Overeem, T., Cai, Z. & Roest, H. I. J., 13 Dec 2016.

Research output: Contribution to conferencePosterAcademic

11 Citations (Scopus)
Open Access
Actinobacillus pleuropneumoniae
Disease Susceptibility
Coinfection
mixed infection
Viruses
15 Citations (Scopus)

Enteropathogen infections in canine puppies: (Co-)occurrence, clinical relevance and risk factors

Duijvestijn, M., Mughini-gras, L., Schuurman, N., Schijf, W., Wagenaar, J. A. & Egberink, H., 2016, In : Veterinary Microbiology. 195, p. 115-122

Research output: Contribution to journalArticleAcademicpeer-review

Canine Parvovirus
enteropathogens
Canine Coronavirus
puppies
Carnivore protoparvovirus 1

Epidemiology of infectious haematopoietic necrosis virus (IHNV) in the Neterlands

Haenen, O. L. M., de Vos-de Jong, C. J., Boender, G. J., Schuetze, H., Cieslak, M., Oldenburg, S., Spierenburg, M. A. H., Roozenburg-Hengst, R. E. M., Voorbergen-Laarman, H. A., Engelsma, M. Y. & Olesen, N. J., 2016.

Research output: Contribution to conferencePosterAcademic

1 Citation (Scopus)

Erratum to: Hepatitis E Virus in Farmed Rabbits, Wild Rabbits and Petting Farm Rabbits in the Netherlands

Burt, S. A., Veltman, J., van der Honing-Hakze, R., Schmitt, H. & van der Poel, W. H. M., 2016, In : Food and Environmental Virology. 8, 4, p. 313-313

Research output: Contribution to journalArticleAcademic

7 Citations (Scopus)

ESBL/AmpC-producing Enterobacteriaceae in households with children of preschool age: prevalence, risk factors and co-carriage

van den Bunt, G., Liakopoulos, A., Mevius, D. J., Geurts, Y., Fluit, A. C., Bonten, M. J. M., Mughini-Gras, L. & van Pelt, W., 2016, In : Journal of Antimicrobial Chemotherapy. 72, 2, p. 589-595

Research output: Contribution to journalArticleAcademicpeer-review

Preschool Children
Enterobacteriaceae
Parents
Bacteria
Genotype

ESBL prevalentie op vleeskuikenbedrijven 2016

Graveland, H., Hordijk, J., Dierikx, C. M., van der Goot, J. A., Heederik, D., Garcia, A. D., Mevius, D. J. & Wagenaar, J. A., 2016, Universiteit Utrecht.

Research output: Book/ReportReportProfessional

European bluetongue serotype 8: Disease threat assessment for U.S. sheep

Drolet, B. S., Reister-Hendricks, L. M., Podell, B. K., Breitenbach, J. E., Mcvey, D. S., van Rijn, P. A. & Bowen, R. A., 2016, In : Vector-Borne and Zoonotic Diseases. 16, 6, p. 400-407

Research output: Contribution to journalArticleAcademicpeer-review

Bluetongue
Bluetongue virus
Sheep
Viremia
Livestock
8 Citations (Scopus)

Evaluation of Oral Bait Vaccine Efficacy Against Classical Swine Fever in Village Backyard Pig Farms in Bhutan

Monger, V. R., Stegeman, J. A., Dukpa, K., Gurung, R. B. & Loeffen, W. L. A., 2016, In : Transboundary and Emerging Diseases. 63, 6, p. e2111-e218

Research output: Contribution to journalArticleAcademicpeer-review

Bhutan
Classical Swine Fever
hog cholera
baits
villages
30 Citations (Scopus)

Evidence for Human Adaptation and Foodborne Transmission of Livestock-Associated Methicillin-Resistant Staphylococcus aureus

Larsen, J., Stegger, M., Andersen, P. S. & Wagenaar, J. A., 2016, In : Clinical infectious diseases. 63, 10, p. 1349-1352

Research output: Contribution to journalArticleAcademicpeer-review

Livestock
Poultry
Methicillin-Resistant Staphylococcus aureus
Meat
Epidemiology
7 Citations (Scopus)

Experimental infection of small ruminants with bluetongue virus expressing Toggenburg Orbivirus proteins

van Rijn, P. A., van de Water, S. G. P., Maris-Veldhuis, M. A. & van Gennip, R. G. P., 2016, In : Veterinary Microbiology. 192, p. 145-151

Research output: Contribution to journalArticleAcademicpeer-review

Orbivirus
Toggenburg
Bluetongue virus
Ruminants
small ruminants

Explanatory Variables Associated with Campylobacter and Escherichia coli Concentrations on Broiler Chicken Carcasses during Processing in Two Slaughterhouses

Pacholewicz, E., Swart, A., Wagenaar, J. A., Lipman, L. J. A. & Havelaar, A. H., 2016, In : Journal of Food Protection. 79, 12, p. 2038-2047

Research output: Contribution to journalArticleAcademicpeer-review

Campylobacter coli
chicken carcasses
Abattoirs
slaughterhouses
Chickens
29 Citations (Scopus)

Extended-spectrum cephalosporin- resistant Salmonella enterica serovar heidelberg strains, the Netherlands

Liakopoulos, A., Geurts, Y., Dierikx, C. M., Brouwer, M., Kant, A., Wit, B., Heymans, R., Van Pelt, W. & Mevius, D. J., 2016, In : Emerging Infectious Diseases. 22, 7, p. 1257-1261

Research output: Contribution to journalArticleAcademicpeer-review

Salmonella enterica
Pulsed Field Gel Electrophoresis
Cephalosporins
Netherlands
Public Health