Research Output 1971 2019

2019
1 Citation (Scopus)

High throughput cultivation-based screening on porous aluminum oxide chips allows targeted isolation of antibiotic resistant human gut bacteria

Versluis, D., de J. Bello González, T., Zoetendal, E. G., van Passel, M. W. J. & Smidt, H., 17 Jan 2019, In : PLoS ONE. 14, 1, e0210970.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
aluminum oxide
Aluminum Oxide
Bacteria
Screening
Decontamination

Host factors associated with Giardia duodenalis infection in dogs across multiple diagnostic tests

Uiterwijk, M., Nijsse, R., Kooyman, F. N. J., Wagenaar, J. A., Mughini-Gras, L. & Ploeger, H. W., 21 Nov 2019, In : Parasites and Vectors. 12, 1, 556.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Giardia lamblia
Routine Diagnostic Tests
Dogs
Giardia
Infection

Human respiratory syncytial virus infection in the pre-clinical calf model

Cortjens, B., de Jong, R., Bonsing, J. G., van Woensel, J. B. M., Bem, R. A. & Antonis, A. F. G., 1 Aug 2019, In : Comparative Immunology, Microbiology and Infectious Diseases. 65, p. 213-218 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Human respiratory syncytial virus
Respiratory Syncytial Virus Infections
calves
infection
Virus Diseases

Identification of potential risk factors for Toxoplasma gondii in fattening pigs in the Netherlands using a Bayesian approach

Eppink, D. M., Bouwknegt, M., Oorburg, D., Urlings, H. A. P., van Asseldonk, M., van Wagenberg, C., Krijger, I., van der Giessen, J. W. P., Swanenburg, M. & Wisselink, H. J., 26 Aug 2019.

Research output: Contribution to conferenceAbstractAcademic

Open Access
Toxoplasma gondii
finishing
Netherlands
risk factors
farms

Immunization of young heifers with staphylococcal immune evasion proteins before natural exposure to Staphylococcus aureus induces a humoral immune response in serum and milk

Benedictus, L., Ravesloot, L., Poppe, K., Daemen, I., Boerhout, E., Van Strijp, J., Broere, F., Rutten, V., Koets, A. & Eisenberg, S., 7 Jan 2019, In : BMC Veterinary Research. 15, 1, 15.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
immune evasion
Immune Evasion
Humoral Immunity
humoral immunity
Staphylococcus aureus

Implementation and evaluation of an antimicrobial stewardship programme in companion animal clinics: A stepped-wedge design intervention study

Hopman, N. E. M., Portengen, L., Hulscher, M. E. J. L., Heederik, D. J. J., Verheij, T. J. M., Wagenaar, J. A., Prins, J. M., Bosje, T., Schipper, L., Van Geijlswijk, I. M. & Broens, E. M., 18 Nov 2019, In : PLoS ONE. 14, 11, e0225124.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pets
pets
Animals
anti-infective agents
Veterinary medicine

Improved PCR diagnostics using up-to-date in silico validation: An F-gene RT-qPCR assay for the detection of all four lineages of peste des petits ruminants virus

Flannery, J., Rajko-Nenow, P., Arnold, H., van Weezep, E., van Rijn, P. A., Ngeleja, C. & Batten, C., 1 Dec 2019, In : Journal of Virological Methods. 274, 113735.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Peste-des-petits-ruminants virus
Peste-des-Petits-Ruminants
Computer Simulation
Polymerase Chain Reaction
Genes
Open Access
wild animals
intestinal microorganisms
domestic animals
environmental factors
Lemuridae

Invited review: abomasal damage in veal calves

Bus, J. D., Stockhofe, N. & Webb, L. E., Feb 2019, In : Journal of Dairy Science. 102, 2, p. 943-960

Research output: Contribution to journalArticleAcademicpeer-review

veal calves
Milk
lesions (animal)
etiology
feed meals

In Vitro Seeding Activity of Glycoform-Deficient Prions from Variably Protease-Sensitive Prionopathy and Familial CJD Associated with PrPV180I Mutation

Wang, Z., Yuan, J., Shen, P., Abskharon, R., Lang, Y., Dang, J., Adornato, A., Xu, L., Chen, J., Feng, J., Moudjou, M., Kitamoto, T., Langeveld, J., Appleby, B., Ma, J., Kong, Q., Petersen, R. B., Zou, W. Q. & Cui, L., Aug 2019, In : Molecular Neurobiology. 56, 8, p. 5456-5469

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Prions
Peptide Hydrolases
Mutation
Brain
Transgenic Mice
2 Citations (Scopus)

In vivo transcriptomes of Streptococcus suis reveal genes required for niche-specific adaptation and pathogenesis

Arenas, J., Bossers-de Vries, R., Harders-Westerveen, J., Buys, H., Ruuls-van Stalle, L. M. F., Stockhofe-Zurwieden, N., Zaccaria, E., Tommassen, J., Wells, J. M., Smith, H. E. & de Greeff, A., 7 Apr 2019, In : Virulence. 10, 1, p. 334-351

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Streptococcus suis
Transcriptome
Virulence Factors
Genes
Swine
1 Citation (Scopus)
Open Access
Toxoplasmosis
Seroepidemiologic Studies
Toxoplasma gondii
Agriculture
Netherlands

Limited changes in the fecal microbiome composition of laying hens after oral inoculation with wild duck feces

Schreuder, J., Velkers, F. C., Bouwstra, R. J., Beerens, N., Stegeman, J. A., de Boer, W. F., Elbers, A. R. W., van Hooft, P., Feberwee, A., Bossers, A. & Jurburg, S. D., 2019, In : Poultry Science. 98, 12, p. 6542–6551

Research output: Contribution to journalArticleProfessional

laying hens
ducks
oral administration
feces
hens
3 Citations (Scopus)

Limited contribution of non-intensive chicken farming to ESBL-producing Escherichia coli colonization in humans in Vietnam: an epidemiological and genomic analysis

Nguyen, V. T., Jamrozy, D., Matamoros, S., Carrique-Mas, J. J., Ho, H. M., Thai, Q. H., Nguyen, T. N. M., Wagenaar, J. A., Thwaites, G., Parkhill, J., Schultsz, C. & Ngo, T. H., 1 Mar 2019, In : The Journal of antimicrobial chemotherapy. 74, 3, p. 561-570

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Vietnam
Agriculture
Chickens
Escherichia coli
Poultry

Livestock-Associated meticillin-resistant Staphylococcus aureus in a young harbour seal (Phoca vitulina) with endocarditis

Rubio-Garcia, A., Rossen, J. W. A., Wagenaar, J. A., Friedrich, A. W. & Van Zeijl, J. H., 1 Sep 2019, In : Veterinary Record Case Reports. 7, 3, e000886.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phoca
endocarditis
Phoca vitulina
Methicillin
methicillin

Living in cold blood: Arcobacter, Campylobacter, and Helicobacter in reptiles

Gilbert, M. J., Duim, B., Zomer, A. L. & Wagenaar, J. A., 15 May 2019, In : Frontiers in Microbiology. 10, MAY, 1086.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Arcobacter
Helicobacter
Epsilonproteobacteria
Campylobacter
Reptiles

Manifold learning for parameter reduction

Holiday, A., Kooshkbaghi, M., Bello-Rivas, J. M., William Gear, C., Zagaris, A. & Kevrekidis, I. G., Sep 2019, In : Journal of computational physics. 392, p. 419-431

Research output: Contribution to journalArticleAcademicpeer-review

Manifold Learning
learning
Data-driven
Curse of Dimensionality
Model Reduction

Maternale antilichamen tegen Campylobacter in eieren van verschillende merken kippen

Koene, M. G. J., van der Goot, J. A., Cornelissen, J. B. W. J., de Jong, I., Kollenstart, J. & den Hartog, M., 1 Feb 2019

Research output: Book/ReportReportProfessional

5 Citations (Scopus)

Meta-analysis reveals that pollinator functional diversity and abundance enhance crop pollination and yield

Woodcock, B. A., Garratt, M. P. D., Powney, G. D., Shaw, R. F., Osborne, J. L., Soroka, J., Lindström, S. A. M., Stanley, D., Ouvrard, P., Edwards, M. E., Jauker, F., McCracken, M. E., Zou, Y., Potts, S. G., Rundlöf, M., Noriega, J. A., Greenop, A., Smith, H. G., Bommarco, R., van der Werf, W. & 5 others, Stout, J. C., Steffan-Dewenter, I., Morandin, L., Bullock, J. M. & Pywell, R. F., 1 Apr 2019, In : Nature Communications. 10, 1481.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Oilseeds
Pollination
Rape
crops
Crops
Open Access
Glucans
Carps
Innate Immunity
Aquaculture
Anti-Bacterial Agents
3 Citations (Scopus)

Molecular typing of Streptococcus suis strains isolated from diseased and healthy pigs between 1996-2016

Louise Prüfer, T., Rohde, J., Verspohl, J., Rohde, M., De Greeff, A., Willenborg, J. & Valentin-Weigand, P., 1 Jan 2019, In : PLoS ONE. 14, 1, e0210801.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Streptococcus suis
Molecular Typing
serotypes
Swine
Genes
1 Citation (Scopus)
Open Access
Livestock
Netherlands
Swine
Escherichia coli
Sulfamethoxazole
1 Citation (Scopus)

Multi-host disease management: The why and the how to include wildlife

Portier, J., Ryser-Degiorgis, M. P., Hutchings, M. R., Monchâtre-Leroy, E., Richomme, C., Larrat, S., Van Der Poel, W. H. M., Dominguez, M., Linden, A., Santos, P. T., Warns-Petit, E., Chollet, J. Y., Cavalerie, L., Grandmontagne, C., Boadella, M., Bonbon, E. & Artois, M., 14 Aug 2019, In : BMC Veterinary Research. 15, 1, 295.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
wildlife diseases
Disease Management
Disease Outbreaks
wildlife
disease control

Mycobacterium avium subspecies paratuberculosis DNA and antibodies in dairy goat colostrum and milk

Lievaart-Peterson, K., Luttikholt, S., Gonggrijp, M., Ruuls, R., Ravesloot, L. & Koets, A. P., 29 Nov 2019, In : Veterinary Sciences. 6, 4, 96.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Mycobacterium avium subsp. paratuberculosis
Colostrum
Mycobacterium avium
dairy goats
paratuberculosis

Mycobacterium avium Subspecies paratuberculosis DNA and Antobodies in Dairy Goat Colostrum and Milk

Lievaart-Peterson, K., Luttikholt, S., Gonggrijp, M., Ruuls, R. C., Ravesloot, L. & Koets, A. P., 29 Nov 2019, In : Veterinary Sciences. 6, 4, 96.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Mycobacterium avium subsp. paratuberculosis
Colostrum
Mycobacterium avium
dairy goats
paratuberculosis
1 Citation (Scopus)

New evidence for domesticated animals as reservoirs of Chlamydia-associated community-acquired pneumonia

Polkinghorne, A., Borel, N., Heijne, M. & Pannekoek, Y., Feb 2019, In : Clinical Microbiology and Infection. 25, 2, p. 131-132

Research output: Contribution to journalLetterAcademicpeer-review

1 Citation (Scopus)

Novel carbapenemases FLC-1 and IMI-2 encoded by an enterobacter cloacae complex isolated from food products

Brouwer, M. S. M., Tehrani, K. H. M. E., Rapallini, M., Geurts, Y., Kant, A., Harders, F., Mashayekhi, V., Martin, N. I., Bossers, A., Mevius, D. J., Wit, B. & Veldman, K. T., 1 Jun 2019, In : Antimicrobial Agents and Chemotherapy. 63, 6, e02338-18.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Enterobacter cloacae
Bacteria
Food
Seafood
Carbapenems
2 Citations (Scopus)

Novel function of Bleutongue Virus NS3 Protein in Regulation of the MAPK/ERK Signaling Pathway

Kundlacz, C., Pourcelot, M., Fablet, A., Amaral Da Silva Moraes, R., Leger, T., Morlet, B., Viarouge, C., Sailleau, C., Turpaud, M., Gorlier, A., Breard, E., Lecollinet, S., van Rijn, P. A., Zientara, S., Vitour, D. & Caignard, G., Aug 2019, In : Journal of Virology. 93, 16, 17 p., e00336-19.

Research output: Contribution to journalArticleAcademicpeer-review

Bluetongue virus
Extracellular Signal-Regulated MAP Kinases
Mitogen-Activated Protein Kinases
mitogen-activated protein kinase
Viruses

NSs Filament Formation Is Important but Not Sufficient for RVFV Virulence In Vivo

Li, S., Zhu, X., Guan, Z., Huang, W., Zhang, Y., Kortekaas, J., Lozach, P. Y. & Peng, K., 8 Sep 2019, In : Viruses. 11, 9

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Rift Valley fever virus
Virulence
Phlebovirus
Viral Nonstructural Proteins
Reverse Genetics
1 Citation (Scopus)

Occurrence and characterization of methicillin resistant Staphylococcus aureus in processed raw foods and ready-to-eat foods in an urban setting of a developing country

Islam, M. A., Parveen, S., Rahman, M., Huq, M., Nabi, A., Khan, Z. U. M., Ahmed, N. & Wagenaar, J. A., 14 Mar 2019, In : Frontiers in Microbiology. 10, MAR, 503.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Methicillin-Resistant Staphylococcus aureus
Developing Countries
Food
Staphylococcus aureus
Meat

Onderbouwing DGF-plafonds 2020/2024

van Asseldonk, M. A. P. M., Elbers, A. R. W., Hagenaars, T. J., Boender, G. J. & Bergevoet, R. H. M., 2019, Wageningen: Wageningen Economic Research. 41 p. (Wageningen Economic Research report; no. 2019-046)

Research output: Book/ReportReportProfessional

One health, one virology

van der Poel, W. H. M., 2019, Wageningen: Wageningen University & Research. 28 p.

Research output: Book/ReportInaugural speechPopular

Open Access
2 Citations (Scopus)

Patterns of community assembly in the developing chicken microbiome reveal rapid primary succession

Jurburg, S. D., Brouwer, M. S. M., Ceccarelli, D., van der Goot, J., Jansman, A. J. M. & Bossers, A., 1 Sep 2019, In : MicrobiologyOpen. 8, 9, p. e00821

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microbiota
Chickens
Ruminococcus
Arthrobacter
Escherichia
1 Citation (Scopus)

PCR diagnostics: In silico validation by an automated tool using freely available software programs

van Weezep, E., Kooi, B. & van Rijn, P. A., Aug 2019, In : Journal of Virological Methods. 270, p. 106-112

Research output: Contribution to journalArticleAcademicpeer-review

Computer Simulation
Software
Polymerase Chain Reaction
Genetic Drift
High-Throughput Nucleotide Sequencing

Phylogenomic investigation of IncI1-I plasmids harboring blaCMY-2 and blaSHV-12 in salmonella enterica and Escherichia coli in multiple countries

Castellanos, L. R., van der Graaf-Van Bloois, L., Donado-Godoy, P., Mevius, D. J., Wagenaar, J. A., Hordijk, J. & Zomer, A. L., 2019, In : Antimicrobial Agents and Chemotherapy. 63, 7, e02546-18.

Research output: Contribution to journalArticleAcademicpeer-review

Salmonella enterica
Plasmids
Escherichia coli
Genome
Genes
1 Citation (Scopus)

Phylogeographic distribution of human and hare Francisella tularenses susp. holarctica strains in the Netherlands and its pathology in European brown hares (Lepus europaeus)

Koene, M. G. J., Rijks, J. M., Maas, M., Ruuls, R. C., Engelsma, M. Y., van Tulden, P. W., Kik, M., IJzer, J., Notermans, D., de Vries, M., Fanoy, E., Pijnacker, R., Spierenburg, M. A. H., Bavelaar, H., Berkhout, H., Sankatsing, S., Diepersloot, R., Myrtennas, K., Granberg, M., Forsman, M. & 2 others, Roest, H. I. J. & Gröne, A., 11 Feb 2019, In : Frontiers in Cellular and Infection Microbiology. 9, 11 p., 11.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Francisella
Hares
Netherlands
Pathology
Tularemia
1 Citation (Scopus)

Pooling of genital swabs for detection by PCR of Taylorella equigenitalis, the cause of contagious equine metritis

Mawhinney, I., Errington, J., Stamper, N., Torrens, N., Engelsma, M. Y. & Roest, H. I. J., Mar 2019, In : Equine Veterinary Journal. 51, 2, p. 227-230

Research output: Contribution to journalArticleAcademicpeer-review

Taylorella equigenitalis
contagious equine metritis
Horses
genitalia
Polymerase Chain Reaction

Prebiotic oligosaccharides in early life alter gut microbiome development in male mice while supporting influenza vaccination responses

van den Elsen, L. W. J., Tims, S., Jones, A. M., Stewart, A., Stahl, B., Garssen, J., Knol, J., Forbes-Blom, E. E. & van’t Land, B., 18 Feb 2019, In : Beneficial Microbes. 10, 3, p. 279-291 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Prebiotics
Oligosaccharides
Human Influenza
Vaccination
Antibody Formation

Prospects of Next-Generation Vaccines for Bluetongue

van Rijn, P. A., 21 Nov 2019, In : Frontiers in Veterinary Science. 6, 407.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bluetongue
bluetongue
Vaccines
vaccines
Bluetongue virus
Open Access
Influenza in Birds
video cameras
avian influenza
wild birds
Netherlands
2 Citations (Scopus)

Quantifying antimicrobial use in Dutch companion animals

Hopman, N. E. M., Van Dijk, M. A. M., Broens, E. M., Wagenaar, J. A., Heederik, D. J. J. & Van Geijlswijk, I. M., 28 May 2019, In : Frontiers in Veterinary Science. 6, May, 158.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pets
pets
Animal Hospitals
anti-infective agents
Veterinary Medicine
2 Citations (Scopus)

Quantitative and qualitative analysis of antimicrobial usage at farm and flock level on 181 broiler farms in nine European countries

1 Mar 2019, In : The Journal of antimicrobial chemotherapy. 74, 3, p. 798-806

Research output: Contribution to journalArticleAcademicpeer-review

Polymyxins
Fluoroquinolones
Farms
Incidence
6 Citations (Scopus)
Swine
Polymyxins
Penicillins
Cross-Sectional Studies
Farms

Quantitative Assessment Of The Health Risk For Livestock When Animal Viruses Are Applied in Human Oncolytic Therapy: A Case Study for Seneca Valley Virus

Schijven, J., Brizee, S., Teunis, P., de Vos-de Jong, C. J., Eble, P. L. & Rutjes, S., May 2019, In : Risk Analysis. 39, 5, p. 982-991 13227.

Research output: Contribution to journalArticleAcademicpeer-review

Health risks
Livestock
Viruses
Farms
Animals
2 Citations (Scopus)

Reassortments among avian influenza A(H5N1) viruses circulating in Indonesia, 2015-2016

Karo-Karo, D., Bodewes, R., Wibawa, H., Artika, I. M., Pribadi, E. S., Diyantoro, D., Pratomo, W., Sugama, A., Hendrayani, N., Indasari, I., Wibowo, M. H., Muljono, D. H., Stegeman, J. A. & Koch, G., 1 Mar 2019, In : Emerging Infectious Diseases. 25, 3, p. 465-472 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
H5N1 Subtype Influenza A Virus
Influenza in Birds
Indonesia
Influenza A virus
Poultry
1 Citation (Scopus)

Rift Valley fever: biology and epidemiology

Wright, D., Kortekaas, J., Bowden, T. A. & Warimwe, G. M., 1 Aug 2019, In : The Journal of general virology. 100, 8, p. 1187-1199 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Rift Valley Fever
Epidemiology
Disease Outbreaks
Vaccines
Rift Valley fever virus

Risicomodellering veehouderij en gezondheid (RVG): modellering van regionale endotoxineconcentraties en relaties met gezondheidseffecten

Heederik, D., Erbrink, H., Farokhi, A., Hagenaars, T., Hoek, G., Ogink, N., de Rooij, M., Smit, L., Winkel, A. & Wouters, I., Feb 2019, Wageningen: Wageningen University & Research. 133 p. (IRAS UU; no. 2019-01)(WBVR; no. 1910304)

Research output: Book/ReportReportProfessional

Open Access

Risk assessment of exotic disease incursion and spread

Cabral, M., Taylor, R. & de Vos, C. J., 1 Sep 2019, In : EFSA Journal. 17, S2, e170916.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
risk assessment
imports
plant health
animal diseases
Animal Diseases