Research Output 2009 2020

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internal PhD, WU
2019

A FAIR approach to genomics

Koehorst, J. J., 2019, Wageningen: Wageningen University. 245 p.

Research output: Thesisinternal PhD, WU

Open Access
genomics
genome
Biological Sciences
propanediols
infrastructure

Bioprospecting of Trichococcus species

Strepis, N., 2019, Wageningen: Wageningen University. 228 p.

Research output: Thesisinternal PhD, WU

Open Access
Trichococcus
inulin
propanediols
Thiocystis minor
screening

Insight into the molecular mechanisms of organic acid pathways in Aspergillus niger

Laothanachareon, T., 2019, Wageningen: Wageningen University. 252 p.

Research output: Thesisinternal PhD, WU

Aspergillus niger
organic acids and salts
glucose oxidase
transmembrane proteins
active transport

Modeling metabolism of Mycobacterium tuberculosis

Rienksma, R. A., 2019, Wageningen: Wageningen University. 167 p.

Research output: Thesisinternal PhD, WU

Open Access
Mycobacterium tuberculosis
Biomass
Infection
RNA Sequence Analysis
Growth

Semantic systems biology of prokaryotes: heterogeneous data integration to understand bacterial metabolism

van Dam, J. C. J., 2019, Wageningen: Wageningen University. 255 p.

Research output: Thesisinternal PhD, WU

Open Access
Systems Biology
Semantics
Genome
Genotype
Phenotype

Transcriptional landscapes of lipid producing microalgae

Carrères, B. M., 2019, Wageningen: Wageningen University. 249 p.

Research output: Thesisinternal PhD, WU

Open Access
microalgae
Ettlia oleoabundans
algae
nitrogen
lipids
2018

A computational approach to study the transcriptional response of enterocytes exposed to luminal factors

Venkatasubramanian, P. B., 2018, Wageningen: Wageningen University. 214 p.

Research output: Thesisinternal PhD, WU

Open Access
Enterocytes
Clostridium difficile
Food
Onions
Caco-2 Cells

Improved functional annotations are key to realize the potential of algal biotechnology

Reijnders, M. J. M. F., 2018, Wageningen: Wageningen University. 194 p.

Research output: Thesisinternal PhD, WU

Open Access
biotechnology
bioinformatics
microalgae
proteins
prediction

Interactive functional networks in microbiota

Hornung, B. V. H., 2018, Wageningen: Wageningen University. 176 p.

Research output: Thesisinternal PhD, WU

Open Access
rumen
carbohydrates
cows
transcriptome
microbial communities

Itaconic acid production in Aspergillus niger

van der Straat, L., 2018, Wageningen: Wageningen University. 144 p.

Research output: Thesisinternal PhD, WU

Open Access
Aspergillus niger
acids
Aspergillus terreus
transporters
citric acid
2017

Interactions and functionalities of the gut revealed by computational approaches

Benis, N., 2017, Wageningen: Wageningen University. 247 p.

Research output: Thesisinternal PhD, WU

Open Access
digestive system
gastrointestinal system
pathogens
methodology
bioinformatics

Metabolic modeling to understand and redesign microbial systems

van Heck, R. G. A., 2017, Wageningen: Wageningen University. 239 p.

Research output: Thesisinternal PhD, WU

genome
Pseudomonas putida
intestinal microorganisms
algae
organisms

Modeling spatial pattern formation in plant development

Adibi, M., 2017, Wageningen: Wageningen University. 209 p.

Research output: Thesisinternal PhD, WU

Open Access
plant development
genes
topology
genetic techniques and protocols
embryogenesis

Organic acid production in Aspergillus niger and other filamentous fungi

Odoni, D. I., 2017, Wageningen: Wageningen University. 207 p.

Research output: Thesisinternal PhD, WU

Open Access
Aspergillus niger
organic acids and salts
fungi
citrates
transporters

Systems analysis of Mycoplasma hyopneumoniae to improve vaccine production

Kamminga, T., 2017, Wageningen: Wageningen University. 152 p.

Research output: Thesisinternal PhD, WU

Open Access
Mycoplasma hyopneumoniae
systems analysis
vaccines
genome
Mycoplasma

The uptake of carbon sources by Aspergillus niger

Sloothaak, J., 2017, Wageningen: Wageningen University. 179 p.

Research output: Thesisinternal PhD, WU

Open Access
Aspergillus niger
transporters
uptake mechanisms
fungi
carbon
codons
membrane proteins
engineering
Escherichia coli
translation (genetics)
2015

Lipoxygenase : a game-changing enzyme

Heshof, R., 2015, Wageningen: Wageningen University. 160 p.

Research output: Thesisinternal PhD, WU

Open Access
Aspergillus nidulans
Lipoxygenase
Aspergillus niger
Escherichia coli
Biomass
2013
Open Access
2012
Open Access
information systems
mutation
proteins
protein engineering
protein structure
2011

Optimization of Pseudomonas putida KT2440 as host for the production of cis, cis-muconate from benzoate

van Duuren, J. B. J. H., 2011, {S.l.]: S.n.. 132 p.

Research output: Thesisinternal PhD, WU

Open Access
Pseudomonas putida
benzoates
feedstocks
catechol
adipic acid