Research Output 1993 2020

2016
22 Citations (Scopus)

The knock-down of the expression of MdMLO19 reduces susceptibility to powdery mildew (Podosphaera leucotricha) in apple (Malus domestica)

Pessina, S., Angeli, D., Martens, S., Visser, R. G. F., Bai, Y., Salamini, F., Velasco, R., Schouten, H. J. & Malnoy, M., 2016, In : Plant Biotechnology Journal. 14, 10, p. 2033-2044

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Podosphaera leucotricha
Malus
Malus domestica
powdery mildew
apples
1 Citation (Scopus)

The Role of Polyploidization and Interspecific Hybridization in the Breeding of Ornamental Crops

Marasek-Ciolakowska, A., Arens, P. F. P. & van Tuyl, J. M., 2016, Polyploidy and Hybridization for Crop Improvement. Mason, A. (ed.). CRC Press, p. 159-181

Research output: Chapter in Book/Report/Conference proceedingChapter

interspecific hybridization
ornamental plants
polyploidy
breeding
crops
17 Citations (Scopus)
Open Access
vpr Genes
Solanum
Phytophthora infestans
Solanum tuberosum
Bacterial Artificial Chromosomes
14 Citations (Scopus)

The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus

Pelkmans, J. F., Vos, A. M., Scholtmeijer, K., Hendrix, E., Baars, J. J. P., Gehrmann, T., Reinders, M. J. T., Lugones, L. G. & Wösten, H. A. B., 21 May 2016, In : Applied Microbiology and Biotechnology. 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Agaricus
Agaricales
Schizophyllum
Basidiomycota
Agrobacterium
3 Citations (Scopus)

Towards Sustainable Potato Late Blight Resistance by Cisgenic R Gene Pyramiding

Kwang-Ryong Jo, Zhu, S., Bai, Y., Hutten, R. C. B., Kessel, G. J. T., Vleeshouwers, V. G. A. A., Jacobsen, E., Visser, R. G. F. & Vossen, J. H., 2016, Plant Pathogen Resistance Biotechnology. Collinge, D. B. (ed.). Hoboken, NJ: John Wiley and Sons, p. 171-191

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

Phytophthora infestans
potatoes
genetic engineering
breeding
genes
12 Citations (Scopus)

Trace metal distributions in the sediments of the Little Akaki River, Addis Ababa, Ethiopia

Akele, M. L., Kelderman, P., Koning, C. W. & Irvine, K., 2016, In : Environmental Monitoring and Assessment. 188, 7, 389.

Research output: Contribution to journalArticleAcademicpeer-review

trace metal
Sediments
Rivers
metal
river
7 Citations (Scopus)

Transcriptome Analysis of Gerbera hybrida Including in silico Confirmation of Defense Genes Found

Fu, Y., Esselink, G., Visser, R. G. F., van Tuyl, J. M. & Arens, P. F. P., 1 Mar 2016, In : Frontiers in Plant Science. 7, 247.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gerbera
transcriptomics
disease resistance
genes
buds

Using phenomics and genomics to unlock landrace and wild relative diversity for crop improvement

Vosman, B., Pelgrom, K. T. B., Sharma, G., Voorrips, R. E., Broekgaarden, C., Pritchard, J., May, S., Adobor, S., Castellanos-Uribe, M., van Kaauwen, M. P. W., Finkers, H. J., Janssen, B., van Workum, W. & Ford-Lloyd, B., 2016, Enhancing crop genepool use: capturing wild relative and landrace diversity for crop improvement. Maxted, N., Dulloo, M. E. & Ford-Lloyd, B. V. (eds.). CABI, p. 1-9

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

wild relatives
Aleyrodidae
landraces
Brevicoryne brassicae
plant genetic resources

Utilization of complete chloroplast genomes for phylogenetic studies

Ramlee, S. I. B., 2016, Wageningen: Wageningen University. 186 p.

Research output: Thesisinternal PhD, WU

Open Access
Paphiopedilum
phylogeny
genome
chloroplasts
Solanum lycopersicum

Utilizing low-coverage sequence data in tomato recombinant inbred lines (S. lycopersicum x S. pimpinellifolium)

van Binsbergen, R., Bink, M. C. A. M., Finkers, H. J., Calus, M. P. L., Veerkamp, R. F. & van Eeuwijk, F. A., 2016, Plant Breeding: the art of bringing science to life - Abstracts of the 20th EUCARPIA General Congress. Kölliker, R. & Boller, B. (eds.). Agroscope, Institute for Sustainability Sciences ISS, p. 19 1 p.

Research output: Chapter in Book/Report/Conference proceedingAbstractAcademic

Open Access

Vatbaarheid resistente rassen na doorbraak door schurftschimmel

Schouten, H. J., Groenwold, R., van Silfhout, A. A. & de Jong, P. F., 2016.

Research output: Contribution to conferencePosterProfessional

Open Access

What the Q?

Goud, J. C., 2016, In : Gewasbescherming. 47, 4, p. 91-91

Research output: Contribution to journalArticleProfessional

Open Access
6 Citations (Scopus)

Where are we now as we merge genomics into plant breeding and what are our limitations? Experiences from RosBREED

Iezzoni, A., Weebadde, C., Peace, C., Main, D., Bassil, N. V., Coe, M., Fazio, G., Gallardo, K., Gasic, K., Luby, J., McFerson, J., Van De Weg, E. & Yue, C., 2016, 29th International Horticultural Congress on Horticulture: Sustaining Lives, Livelihoods and Landscapes (IHC 2014): 2nd International Berry Fruit Symposium: Interactions! Local and Global Berry Research and Innovation. International Society for Horticultural Science, Vol. 1117. p. 1-5 5 p. (Acta Horticulturae; vol. 1117).

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademicpeer-review

plant breeding
peaches
apples
genomics
National Institute of Food and Agriculture

Why Oats Are Safe and Healthy for Celiac Disease Patients

Gilissen, L. J. W. J., van der Meer, I. M. & Smulders, M. J. M., 26 Nov 2016, In : Medical Sciences. 4, 4, 5 p., 21.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Celiac Disease
Prolamins
Glutens
Gluten-Free Diet
Triticum
2015

A case study on constructing a rearranged physical and genetic SNP marker map for tetraploid alfalfa

Voorrips, R. E., Jansen, J., Ho, J. & Bink, M. C. A. M., 2015, p. 100-100.

Research output: Contribution to conferenceAbstractAcademic

39 Citations (Scopus)

Accuracy and responses of genomic selection on key traits in apple breeding

Muranty, H., Troggio, M., Ben Sadok, I., Al Rifaï, M., Auwerkerken, A., Banchi, E., Velasco, R., Stevanato, P., van de Weg, W. E., Di Guardo, M., Kumar, S., Laurens, F. & Bink, M. C. A. M., 2015, In : Horticulture Research. 2, 15060.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Malus
marker-assisted selection
Breeding
apples
Single Nucleotide Polymorphism

Accuracy of sampling during mushroom cultivation

Baars, J. J. P., Hendrickx, P. M. & Sonnenberg, A. S. M., 2015, Wageningen: Wageningen UR. 33 p. (PPO/PRI report; no. 2015-5)

Research output: Book/ReportReportProfessional

Open Access
mushroom growing
mushrooms
Agaricus bisporus
composts
sampling
2 Citations (Scopus)

A first pedigree-based analysis (PBA) approach for the dissection of disease resistance traits in grapevine hybrids

Peressotti, E., Dolzani, C., Poles, L., Banchi, E., Stefanini, M., Salamini, F., Velasco, R., Vezzulli, S., Riaz, S., Walker, M. A., Reisch, B. I., Van De Weg, W. E. & Bink, M. C. A. M., 2015, In : Acta Horticulturae. 1082, p. 113-122

Research output: Contribution to journalArticleAcademicpeer-review

pedigree
disease resistance
breeding
quantitative trait loci
alleles

A joint Laimburg - FEM molecular markers project for apple fruit quality traits using the Pedigree Based Analysis strategy

Lozano, L., Di Guardo, M., Van De Weg, W. E., Bink, M. C. A. M., Velasco, R., Costa, F. & Guerra, W., 30 Sep 2015, III International Symposium on Molecular Markers in Horticulture. Velasco, R. (ed.). International Society for Horticultural Science, p. 91-94 4 p. (Acta Horticulturae; vol. 1100).

Research output: Chapter in Book/Report/Conference proceedingConference paper

pedigree
fruit quality
apples
genetic markers
breeding
4 Citations (Scopus)

Analysis of inheritance mode in chrysanthemum using EST-derived SSR markers

Park, S. K., Arens, P., Esselink, D., Lim, J. H. & Shin, H. K., 2015, In : Scientia Horticulturae. 192, p. 80-88

Research output: Contribution to journalArticleAcademicpeer-review

Chrysanthemum
inheritance (genetics)
alleles
gene segregation
disomics
1 Citation (Scopus)

A preliminary amplified fragment length polymorphism (AFLP) primers selection for spathoglottis species

Ginibun, F. C., Bhassu, S., Khalid, N., Arens, P., Vosman, B. & Othman, R. Y., 2015, In : Acta Horticulturae. 1078, p. 167-173

Research output: Contribution to journalArticleAcademicpeer-review

Spathoglottis
amplified fragment length polymorphism
Dendrobium
landscaping
2 Citations (Scopus)

Assessing the immunomodulatory potential of high-molecular-weight extracts from mushrooms; an assay based on THP-1 macrophages

van de Velde, J., Wilbers, R. H. P., Westerhof, L. B., van Raaij, D. R., Stavrakaki, I., Sonnenberg, A. S. M., Bakker, J. & Schots, A., 2015, In : Journal of the Science of Food and Agriculture. 95, 2, p. 344-350

Research output: Contribution to journalArticleAcademicpeer-review

Agaricales
mushrooms
macrophages
Molecular Weight
Macrophages
20 Citations (Scopus)

ASSIsT: An Automatic SNP ScorIng Tool for in- and outbreeding species

Di Guardo, M., Micheletti, D., Bianco, L., Koehorst-van Putten, H. J. J., Longhi, S., Costa, F., Aranzana, M. J., Velasco, R., Arus, P., Troggio, M. & van de Weg, W. E., 2015, In : Bioinformatics. 31, 23, p. 3873-3874

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Data visualization
Inbreeding
Scoring
Single Nucleotide Polymorphism
Pipelines
34 Citations (Scopus)

A transposable element insertion in the susceptibility gene CsaMLO8 results in hypocotyl resistance to powdery mildew in cucumber

Berg, J. A., Appiano, M., Santillán Martínez, M. I., Hemans, F. W. K., Vriezen, W. H., Visser, R. G. F., Bai, Y. & Schouten, H. J., 2015, In : BMC Plant Biology. 15, 17 p., 243.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
powdery mildew
transposons
hypocotyls
cucumbers
alleles
9 Citations (Scopus)

Bioethanol from maize cell walls: Genes, molecular tools, and breeding prospects

Torres, A. F., Visser, R. G. F. & Trindade, L. M., 2015, In : Global change biology Bioenergy. 7, 4, p. 591-607

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
bioethanol
Bioethanol
bioenergy
Crops
Genes

candYgene: enabling precision breeding through FAIR Data

Kuzniar, A., Gavai, A. K., Ridder, L. O., Bonino da Silva Santos, L. O., Singh, G., Visser, R. G. F. & Finkers, H. J., 2015.

Research output: Contribution to conferenceAbstractAcademic

Open Access
breeding
genes
prioritization
infrastructure
quantitative trait loci
1 Citation (Scopus)

Can Phenotyping for Water Balance Improve Breeding for Vase Life?

van Geest, G. A., van Meeteren, U. & Arens, P., 2015, Proceedings of the 25th International Eucarpia Symposium Section Ornamentals: Crossing Borders. van Huylenbroeck, J. & Dhooghe, E. (eds.). Vol. 1087. p. 149-154

Research output: Chapter in Book/Report/Conference proceedingConference paper

vase life
water balance
phenotype
breeding
weight loss
16 Citations (Scopus)

Cell Wall Diversity in Forage Maize: Genetic Complexity and Bioenergy Potential

Torres, A. F., Noordam-Boot, C. M. M., Dolstra, O., van der Weijde, T., Combes, E., Dufour, P., Vlaswinkel, L., Visser, R. G. F. & Trindade, L. M., 2015, In : Bio Energy Research. 8, 1, p. 187-202

Research output: Contribution to journalArticleAcademicpeer-review

Bioconversion
bioenergy
biotransformation
Cells
cell walls
27 Citations (Scopus)

Cisgenic apple trees; development, characterization, and performance

Krens, F. A., Schaart, J. G., van der Burgh, A. M., Tinnenbroek-Capel, I. E. M., Groenwold, R., Kodde, L. P., Broggini, G. A. L., Gessler, C. & Schouten, H. J., 2015, In : Frontiers in Plant Science. 6, 11 p., 286.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
apples
plantlets
fruits
signs and symptoms (plants)
genes
23 Citations (Scopus)

Combined biotic and abiotic stress resistance in tomato

Kissoudis, C., Chowdhury, R., van Heusden, A. W., van de Wiel, C. C. M., Finkers, H. J., Visser, R. G. F., Bai, Y. & van der Linden, C. G., 2015, In : Euphytica. 202, 2, p. 317-332

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Salt-Tolerance
Disease Resistance
Lycopersicon esculentum
biotic stress
powdery mildew
1 Citation (Scopus)
Metabolomics
Phytochemicals
Transcription
Lycopersicon esculentum
Fruits

Corrigendum to Efficient distinction of invasive aquatic plant species from non-invasive related species using DNA barcoding

Ghahramanzadeh, R., Esselink, G. D., Kodde, L. P., Duistermaat, H., Van Valkenburg, J. L. C. H. S., Marashi, H., Smulders, M. J. M. & Van de Wiel, C. C. M., 1 Jan 2015, In : Molecular Ecology Resources. 15, 1, p. 230-230

Research output: Contribution to journalComment/Letter to the editorAcademic

Cultivation of oyster mushrooms on cassava waste

Sonnenberg, A. S. M., Baars, J. J. P., Obodai, M. & Asagbra, A., 2015, In : Food Chain. 5, 1-2, p. 105-115

Research output: Contribution to journalArticleAcademicpeer-review

cassava
mushrooms
oysters
Pleurotus pulmonarius
Pleurotus ostreatus

Decision Support System (DSS) for prevention of Botrytis in tomato in greenhouses

de Visser, P. H. B., Nannes, L., van Bokhoven, E. H. & Buwalda, F., 2015, Bleiswijk: Wageningen UR Glastuinbouw. 36 p. (Rapport GTB; no. 1345)

Research output: Book/ReportReportProfessional

Open Access
Botrytis
decision support systems
tomatoes
greenhouses
user interface
4 Citations (Scopus)

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

Wolters, A. M. A., Caro Rios, C. M., Dong, S., Finkers, H. J., Gao, J., Visser, R. G. F., Wang, X., Du, Y. & Bai, Y., 2015, In : Theoretical and Applied Genetics. 128, 10, p. 1987-1997

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
genome assembly
Solanum lycopersicum
Lycopersicon esculentum
introgression
Organism Cloning
7 Citations (Scopus)
Crambe Plant
Crambe abyssinica
mutagenesis
Oils
mutation
50 Citations (Scopus)

Development and analysis of an 20K SNP array for potato (Solanum tuberosum): An insight in the breeding history

Vos, P. G., Uitdewilligen, J. G. A. M. L., Voorrips, R. E., Visser, R. G. F. & van Eck, H. J., 2015, In : Theoretical and Applied Genetics. 128, 12, p. 2387-2401

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum tuberosum
Breeding
Single Nucleotide Polymorphism
potatoes
history
75 Citations (Scopus)

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa

Bassil, N. V., Davis, T. M., Zhang, H., Ficklin, S., Mittmann, M., Webster, T., Mahoney, L., Wood, D., Alperin, E. S., Rosyara, U. R., Koehorst-vanc Putten, H., Monfort, A., Sargent, D. J., Amaya, I., Denoyes, B., Bianco, L., van Dijk, T., Pirani, A., Iezzoni, A., Main, D. & 8 others, Peace, C., Yang, Y., Whitaker, V., Verma, S., Bellon, L., Brew, F., Herrera, R. & van de Weg, E., 2015, In : BMC Genomics. 16, 1, 155.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fragaria
Single Nucleotide Polymorphism
Ploidies
Diploidy
Breeding
5 Citations (Scopus)

Development of the WagRhSNP AXIOM SNP Array Based on Sequences from Tetraploid Cut Roses and Garden Roses

Smulders, M. J. M., Voorrips, R. E., Esselink, G., Santos Leonardo, T. M., van 't Westende, W. P. C., Vukosavljev, M., Koning-Boucoiran, C. F. S., van de Weg, W. E., Arens, P. F. P., Schulz, D., Debener, T., Bellon, L., Mittmann, M., Pirani, A., Webster, T., Brew, F., Cox, P. & Maliepaard, C. A., 2015, Proceedings VIth International Symposiul on Rose Research and Cultivation. Debener, T. & Linde, M. (eds.). ISHS, Vol. 1064. p. 177-184

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademicpeer-review

tetraploidy
gardens
Rosa
alleles
vegetable crops

Durable cisgenic resistance to Phytophthora infestans in potato and perspectives for applications in Africa

Gheysen, G., Heremans, B., van Droogenbroeck, B., Custers, R., Vossen, J. H., Visser, R. G. F., Jacobsen, E., Hutten, R. C. B. & Haverkort, A. J., 2015, Potato and sweetpotato in Africa: transforming the value chains for food and nutrition security. Low, J., Nyongesa, M., Quinn, S. & Parker, M. (eds.). Nairobi, Kenya: CABI, p. 122-127 7

Research output: Chapter in Book/Report/Conference proceedingChapter

Phytophthora infestans
potatoes
genes
clones
cultivars
8 Citations (Scopus)
oat flour
Flour
dough
Bread
bran
33 Citations (Scopus)

Effector discovery in the fungal wheat pathogen Zymoseptoria tritici

Mirzadi Gohari, A., Ware, S. B., Wittenberg, A. H. J., Mehrabi, R., Ben M'Barek, S., Verstappen, E. C. P., van der Lee, T. A. J., Robert, O., Schouten, H. J., de Wit, P. J. G. M. & Kema, G. H. J., 2015, In : Molecular Plant Pathology. 16, 9, p. 931-945

Research output: Contribution to journalArticleAcademicpeer-review

Mycosphaerella graminicola
Quantitative Trait Loci
Triticum
pathogenesis
pathogen

Effect van grondbewerking op bodembiologie en ziektewerendheid van de bodem

Postma, J., Schilder, M. T., Bloem, J., Scholten, O. E. & van Balen, D. J. M., 2015, In : Gewasbescherming. 46, 3, p. 84-84

Research output: Contribution to journalArticleProfessional

Open Access
32 Citations (Scopus)
Transcriptome
transcriptome
Microsatellite Repeats
Alleles
microsatellite repeats
84 Citations (Scopus)

Elicitin recognition confers enhanced resistance to Phytophthora infestans in potato

Du, J., Verzaux, E. C., Chaparro-Garcia, A., Bijsterbosch, G., Keizer, L. C. P., Zhou, J., Liebrand, T. W. H., Xie, C., Govers, F., Robatzek, S., van der Vossen, E. A. G., Jacobsen, E., Visser, R. G. F., Kamoun, S. & Vleeshouwers, V. G. A. A., 2015, In : Nature Plants. 1, 5 p., 15034.

Research output: Contribution to journalArticleAcademicpeer-review

Phytophthora infestans
potatoes
pathogens
receptors
Solanum microdontum

Ethical distinctions between different kinds of plant breeding

Myskja, B. K., Schouten, H. J. & Gjerris, M., May 2015, Know your food: food ethics and innovation. Dumitras, D. E., Jitea, I. M. & Arts, S. (eds.). Wageningen Academic Publishers, p. 95-100

Research output: Chapter in Book/Report/Conference proceedingConference paper

Plant Breeding
Risk Assessment
Philosophical Discourse
Scientific Community
Skepticism

Exploiting wild relatives of S. lycopersicum for quality traits

Víquez Zamora, A. M., 2015, Wageningen: Wageningen University. 167 p.

Research output: Thesisexternal PhD, WU

Open Access
2 Citations (Scopus)

Extent of genotypic variation for maize cell wall bioconversion traits across environments and among hybrid combinations

Torres, A. F., Noordam-Boot, C. M. M., Dolstra, O., Vlaswinkel, L., Visser, R. G. F. & Trindade, L. M., 2015, In : Euphytica. 206, 2, p. 501-511

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
biotransformation
Cell Wall
Zea mays
haploidy
cell walls
18 Citations (Scopus)

First successful reduction of clinical allergenicity of food by genetic modification: Mal d 1 silenced apples cause fewer allergy symptoms than the wild-type cultivar

Dubois, A. E. J., Pagliarani, G., Brouwer, R. M., Kollen, B. J., Dragsted, L. O., Eriksen, F. D., Callesen, O., Gilissen, L. J. W. J., Krens, F. A., Visser, R. G. F., Smulders, M. J. M., Vlieg-Boerstra, B. J., Flokstra-de Blok, B. J. & van de Weg, W. E., 2015, In : Allergy. 70, 11, p. 1406-1412

Research output: Contribution to journalArticleAcademicpeer-review

Malus
Hypersensitivity
Food
Down-Regulation
Gene Expression