Research Output 1993 2020

2018
1 Citation (Scopus)

Combining QTL mapping with transcriptome and metabolome profiling reveals a possible role for ABA signaling in resistance against the cabbage whitefly in cabbage

Broekgaarden, C., Pelgrom, K. T. B., Bucher, J., van Dam, N. M., Grosser, K., Pieterse, C. M. J., van Kaauwen, M., Steenhuis, G., Voorrips, R. E., de Vos, M., Vosman, B., Worrich, A. & van Wees, S. C. M., 6 Nov 2018, In : PLoS ONE. 13, 11, e0206103.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
metabolome
Abscisic Acid
Hemiptera
Metabolome
Brassica

Correction to: New traits in crops produced by genome editing techniques based on deletions

van de Wiel, C. C. M., Schaart, J. G., Lotz, L. A. P. & Smulders, M. J. M., Oct 2018, In : Plant Biotechnology Reports. 12, 5, p. 375–375

Research output: Contribution to journalComment/Letter to the editorAcademic

Open Access
Clustered Regularly Interspaced Short Palindromic Repeats
Regulator Genes
Publications
Phenotype
genome

Corrigendum: PolymapR - Linkage analysis and genetic map construction from F 1 populations of outcrossing polyploids

Bourke, P. M., Van Geest, G., Voorrips, R. E., Jansen, J., Kranenburg, T., Shahin, A., Visser, R. G. F., Arens, P., Smulders, M. J. M. & Maliepaard, C., 15 Oct 2018, In : Bioinformatics. 35, 3, p. 540-540

Research output: Contribution to journalComment/Letter to the editorAcademic

Likelihood Functions
Linkage Analysis
Genetic Linkage
Polyploidy
Population

Designing plant varieties with information technology

Visser, R. G. F. & Finkers, H. J., 2018, In : Prophyta - Focus on Europe. p. 28-30

Research output: Contribution to journalArticleProfessional

Open Access
Bioinformatics
Information technology
10 Citations (Scopus)

Development of wheat with hypoimmunogenic gluten obstructed by the gene editing policy in europe

Jouanin, A., Boyd, L., Visser, R. G. F. & Smulders, M. J. M., 18 Oct 2018, In : Frontiers in Plant Science. 871, 1523.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
gluten
Genes
wheat
celiac disease
genes

Different approaches of combating bacterial canker in tomato: in pursuit of resistance

Muniroh binti Mohd Nadzir, M., 2018, Wageningen: Wageningen University. 145 p.

Research output: Thesisinternal PhD, WU

Open Access
Clavibacter michiganensis subsp. michiganensis
signs and symptoms (plants)
tomatoes
wilting
quarantine

Discerning the variation in fungal-treated wheat straw as ruminant feed

Nayan, N., 2018, Wageningen: Wageningen University. 214 p.

Research output: Thesisinternal PhD, WU

Open Access
wheat straw
ruminants
gas production (biological)
lignin
fungi
7 Citations (Scopus)

Drought response in field grown potatoes and the interactions between canopy growth and yield

Aliche, E. B., Oortwijn, M., Theeuwen, T. P. J. M., Bachem, C. W. B., Visser, R. G. F. & van der Linden, G., 30 Jul 2018, In : Agricultural Water Management. 206, p. 20-30 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
tuber
potato
tubers
drought
canopy
3 Citations (Scopus)
cauliflower
ambient temperature
gene
curds (plant)
flowering
6 Citations (Scopus)

Efficient algorithms for polyploid haplotype phasing

He, D., Saha, S., Finkers, R. & Parida, L., 9 May 2018, In : BMC Genomics. 19, Supplement 2, 110.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Polyploidy
Haplotypes
Diploidy
13 Citations (Scopus)

Epistatic fire blight resistance QTL alleles in the apple cultivar ‘Enterprise’ and selection X-6398 discovered and characterized through pedigree-informed analysis

van de Weg, E., Di Guardo, M., Jänsch, M., Socquet-Juglard, D., Costa, F., Baumgartner, I., Broggini, G. A. L., Kellerhals, M., Troggio, M., Laurens, F., Durel, C. E. & Patocchi, A., 1 Jan 2018, In : Molecular Breeding. 38, 1, 5.

Research output: Contribution to journalArticleAcademicpeer-review

Erwinia amylovora
Quantitative Trait Loci
Malus
Pedigree
pedigree
12 Citations (Scopus)

Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study

Motazedi, E., Finkers, H. J., Maliepaard, C. A. & de Ridder, D., May 2018, In : Briefings in Bioinformatics. 19, 3, p. 387-403

Research output: Contribution to journalArticleAcademicpeer-review

Polyploidy
Nucleotides
Haplotypes
Ploidies
Polymorphism
2 Citations (Scopus)

Exploring natural genetic variation in tomato sucrose synthases on the basis of increased kinetic properties

Dinh, Q. D., Finkers, R., Westphal, A. H., van Dongen, W. M. A. M., Visser, R. G. F. & Trindade, L. M., 29 Oct 2018, In : PLoS ONE. 13, 10, e0206636.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
sucrose synthase
Lycopersicon esculentum
Haplotypes
Sucrose
haplotypes

Fair Data Points on standardised Plant data within WUR

Hendrickx, P. M., 12 Dec 2018. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Farm Data Train

Finkers, H. J., 12 Dec 2018. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
11 Citations (Scopus)

Food processing and breeding strategies for coeliac-safe and healthy wheat products

Jouanin, A., Gilissen, L. J. W. J., Boyd, L. A., Cockram, J., Leigh, F. J., Wallington, E. J., van den Broeck, H. C., van der Meer, I. M., Schaart, J. G., Visser, R. G. F. & Smulders, R., Aug 2018, In : Food Research International. 110, p. 11-21

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
wheat products
Food Handling
Glutens
food processing
abdomen

Gene editing using CRISPR/Cas9 to modify or remove gliadins from wheat and produce coeliac disease epitope-free wheat

Smulders, M. J. M., Jouanin, A. A. & Gilissen, L. J. W. J., Apr 2018, Proceedings of the 31st Meeting of the Working Group on Prolamin Analysis and Toxicity. Koehler, P. (ed.). Minden, Germany, p. 63-68

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademic

Open Access
4 Citations (Scopus)

Genetically engineering Crambe abyssinica- A potentially high-value oil crop for salt land improvement

Qi, W., Tinnenbroek-Capel, I. E. M., Salentijn, E. M. J., Zhang, Z., Huang, B., Cheng, J., Shao, H., Visser, R. G. F., Krens, F. A. & van Loo, E. N., Apr 2018, In : Land Degradation and Development. 29, 4, p. 1096-1106

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Limnanthes douglasii
Crambe abyssinica
erucic acid
oil crops
Crambe (Brassicaceae)
1 Citation (Scopus)

Genetic characterization of clavibacter michiganensis subsp. Michiganensis population in Turkey

Sen, Y., Aysan, Y., Mirik, M., Ozdemir, D., Meijer-Dekens, F., van der Wolf, J. M., Visser, R. G. F. & van Heusden, S., 1 Feb 2018, In : Plant Disease. 102, 2, p. 300-308

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Clavibacter michiganensis subsp. michiganensis
Turkey (country)
Gram-positive bacteria
coolers
population structure

Genetic determinism of flowering regularity over years in an apple multi-family population

Durand, J. B., Allard, A., Guitton, B., van de Weg, E., Bink, M. C. A. M. & Costes, E., 10 Dec 2018, International Symposium on Flowering, Fruit Set and Alternate Bearing. Marra, F. P., Caruso, T. & Mitra, S. K. (eds.). ISHS, p. 15-22 (Acta Horticulturae; no. 1229).

Research output: Chapter in Book/Report/Conference proceedingAbstract

apples
flowering
quantitative trait loci
shoots
tree breeding

Genetic diversity and mechanisms of salt tolerance of Miscanthus

Chen, C-L., 2018, Wageningen: Wageningen University. 198 p.

Research output: Thesisinternal PhD, WU

Miscanthus
salt tolerance
genetic variation
genotype
saline soils
1 Citation (Scopus)

Genetic diversity of endangered terrestrial orchids Spathoglottis plicata in Peninsular Malaysia based on AFLP markers

Ginibun, F. C., Arens, P., Vosman, B., Bhassu, S., Khalid, N. & Othman, R. Y., 1 Nov 2018, In : Plant OMICS. 11, 3, p. 135-144

Research output: Contribution to journalArticleAcademicpeer-review

Spathoglottis
Orchidaceae
Malaysia
amplified fragment length polymorphism
genetic variation

Genetic mapping in polyploids

Bourke, P. M., 2018, Wageningen: Wageningen University. 305 p.

Research output: Thesisinternal PhD, WU

Open Access
polyploidy
chromosome mapping
chromosomes
fruits
DNA
2 Citations (Scopus)

Heterologous expression of two Arabidopsis starch dikinases in potato

Xu, X., Dees, D., Huang, X. F., Visser, R. G. F. & Trindade, L. M., Jan 2018, In : Starch-Stärke. 70, 1-2, 1600324 .

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum tuberosum
Arabidopsis
Starch
potatoes
starch
Open Access
agricultural practice
crop
nongovernmental organization
weed
incentive

Koester de wilde verwanten van cultuurgewassen

Vosman, B., 23 May 2018

Research output: Non-textual formWeb publication/siteProfessional

Open Access
1 Citation (Scopus)

Latitudinal adaptation and genetic insights into the origins of cannabis sativa L.

Zhang, Q., Chen, X., Guo, H., Trindade, L. M., Salentijn, E. M. J., Guo, R., Guo, M., Xu, Y. & Yang, M., 1 Jan 2018, In : Frontiers in Plant Science. 871, 1876.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cannabis
Cannabis sativa
Crops
DNA
chloroplast DNA

Linked Data Platform for Plant Breeding and Genomics

Kuzniar, A., Singh, G., Martinez-Ortiz, C., Visser, R. G. F. & Finkers, H. J., 12 Dec 2018. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
Open Access
Delignification
Lignin
Straw
Gas Chromatography-Mass Spectrometry
Cell Wall

Milk yield and composition of dairy goats fed Lentinula Edodes and Ceriporiopsis subvermispora treated wheat straw

Ratni, E., Sonnenberg, A. S. M., Hendriks, W. H. & Cone, J. W., 11 Apr 2018, p. 59-60.

Research output: Contribution to conferenceAbstractAcademic

Molecular analysis of genetic diversity, population structure, and phylogeny of wild and cultivated tulips (Tulipa L.) by genic microsatellites

Pourkhaloee, A., Khosh-Khui, M., Arens, P., Salehi, H., Razi, H., Niazi, A., Afsharifar, A. & van Tuyl, J., Dec 2018, In : Horticulture Environment and Biotechnology. 59, 6, p. 875-888

Research output: Contribution to journalArticleAcademicpeer-review

Tulipa
Phylogeny
Microsatellite Repeats
Molecular Biology
population structure

Molecular determination and genetic modification of flower colour in Lilium spp

Fatihah Hasan Nudin, N., 2018, Wageningen: Wageningen University. 170 p.

Research output: Thesisinternal PhD, WU

Open Access
Lilium
genetic engineering
flowers
color
anthocyanins
8 Citations (Scopus)

Multi-environment QTL analysis of plant and flower morphological traits in tetraploid rose

Bourke, P. M., Gitonga, V. W., Voorrips, R. E., Visser, R. G. F., Krens, F. A. & Maliepaard, C., Oct 2018, In : Theoretical and Applied Genetics. 131, 10, p. 2055–2069

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tetraploidy
Quantitative Trait Loci
tetraploidy
quantitative trait loci
Rosa

Negative hydrostatic pressure is an unnoticed but significant source of contamination in tissue culture

Askari, N. & de Klerk, G. J., 5 Oct 2018, Proceedings of the 2017 Annual Meeting of the International Plant Propagators' Society. Heuser Jr., C. W., Roberts, W. G., Larkman, C., Gunn, S., Tomita, M., Foulds, H., Davies, F. T. & Blythe, E. (eds.). International Society for Horticultural Science, p. 85-87 (Acta Horticulturae; vol. 1212).

Research output: Chapter in Book/Report/Conference proceedingConference paper

xylem vessels
tissue culture
liquids
transpiration
air

New Developments in Molecular Techniques for Breeding in Ornamentals

Smulders, M. J. M. & Arens, P., 26 Jul 2018, Ornamental Crops. Van Huylenbroeck, J. (ed.). Springer, p. 213-230 (Handbook of Plant Breeding; vol. 11).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

breeding methods
ornamental plants
breeding
polyploidy
single nucleotide polymorphism

Nitrate control using LED lights

Nicole, C. C. S., Mooren, J., Stuks, A. & Krijn, M. P. C. M., 20 Nov 2018, International Symposium on New Technologies for Environment Control, Energy-Saving and Crop Production in Greenhouse and Plant Factory - GreenSys 2017. Yang, Q. & Li, T. (eds.). ISHS, Vol. 1227. p. 661-668 (Acta Horticulturae).

Research output: Chapter in Book/Report/Conference proceedingAbstract

nitrates
green leafy vegetables
factories
lettuce
preharvest treatment
7 Citations (Scopus)

Nucleus-specific expression in the multinuclear mushroom-forming fungus Agaricus bisporus reveals different nuclear regulatory programs

Gehrmann, T., Pelkmans, J. F., Ohm, R. A., Vos, A. M., Sonnenberg, A. S. M., Baars, J. J. P., Wösten, H. A. B., Reinders, M. J. T. & Abeel, T., 24 Apr 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 17, p. 4429-4434

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Agaricus bisporus
mushrooms
fungi
heterokaryon
transcriptomics
7 Citations (Scopus)

Oats in healthy gluten-free and regular diets: A perspective

Smulders, M. J. M., van de Wiel, C. C. M., van den Broeck, H. C., van der Meer, I. M., Israel-Hoevelaken, T. P. M., Timmer, R. D., van Dinter, B. J., Braun, S. & Gilissen, L. J. W. J., Aug 2018, In : Food Research International. 110, p. 3-10

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gluten-Free Diet
gluten
oats
diet
Glutens

Occurrence of powdery mildew caused by Pseudoidium neolycopersici on papaya (Carica papaya) in China

Mukhtar, I. & van Peer, A. F., Dec 2018, In : Plant Disease. 102, 12, p. 2645-2645

Research output: Contribution to journalLetterAcademic

Open Access

pH of wheat straw during fungal treatment and storage at different temperatures

Mao, L., Sonnenberg, A. S. M., Hendriks, W. H. & Cone, J. W., 2 Sep 2018, In : Advances in Animal Biosciences. 9, 3, 1 p., 493.

Research output: Contribution to journalAbstractAcademic

Open Access

pH of wheat straw during fungal treatment and storage at different temperatures

Mao, L., Sonnenberg, A. S. M., Hendriks, W. H. & Cone, J. W., 2 Sep 2018, p. 493-493.

Research output: Contribution to conferencePosterAcademic

Open Access
24 Citations (Scopus)

Plant behaviour under combined stress: tomato responses to combined salinity and pathogen stress

Bai, Y., Kissoudis, C., Yan, Z., Visser, R. G. F. & van der Linden, G., 1 Feb 2018, In : Plant Journal. 93, 4, p. 781-793

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Salinity
Lycopersicon esculentum
tomatoes
salinity
abiotic stress

Plant breeding techniques in a new era

van de Wiel, C. C. M., Schaart, J. G., Kok, E. J., Prins, T. W., Smulders, M. J. M. & Lotz, L. A. P., 2018, 11 p. Wageningen : Wageningen University & Research.

Research output: Other contributionPamphlet

Open Access
9 Citations (Scopus)

PolymapR-linkage analysis and genetic map construction from F1 populations of outcrossing polyploids

Bourke, P. M., van Geest, G., Voorrips, R. E., Jansen, J., Kranenburg, T., Shahin, A., Visser, R. G. F., Arens, P., Smulders, M. J. M. & Maliepaard, C., 15 Oct 2018, In : Bioinformatics. 34, 20, p. 3496-3502

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Linkage Analysis
Genetic Linkage
Polyploidy
Chrysanthemum
Crops
9 Citations (Scopus)

Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8

Jiang, R., Li, J., Tian, Z., Du, J., Armstrong, M., Baker, K., Tze-Yin Lim, J., Vossen, J. H., He, H., Portal, L., Zhou, J., Bonierbale, M., Hein, I., Lindqvist-Kreuze, H. & Xie, C., 24 Mar 2018, In : Journal of Experimental Botany. 69, 7, p. 1545-1555

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
Solanum tuberosum
Leucine
leucine
quantitative trait loci

Praktijkonderzoek bioraffinage

van Doorn, W., Baars, J. J. P., van Dam, J. E. G., Keijsers, E. R. P. & Yilmaz, G., 2018, Amersfoort: Stichting Toegepast Onderzoek Waterbeheer. 59 p. (STOWA rapport; no. 2018-25)

Research output: Book/ReportReportProfessional

Open Access
1 Citation (Scopus)

Preservation of Ceriporiopsis subvermispora and Lentinula edodes treated wheat straw under anaerobic conditions

Mao, L., Sonnenberg, A. S. M., Hendriks, W. H. & Cone, J. W., 9 Jan 2018, In : Journal of the Science of Food and Agriculture. 98, 3, p. 1232-1239

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Ceriporiopsis subvermispora
Coriolaceae
Shiitake Mushrooms
Lentinula edodes
wheat straw
3 Citations (Scopus)

QTL mapping in diploid potato by using selfed progenies of the cross S. tuberosum × S. chacoense

Meijer, D., Viquez-Zamora, M., van Eck, H. J., Hutten, R. C. B., Su, Y., Rothengatter, R., Visser, R. G. F., Lindhout, W. H. & van Heusden, A. W., Jul 2018, In : Euphytica. 214, 7, 121.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum tuberosum
Diploidy
quantitative trait loci
diploidy
potatoes
2 Citations (Scopus)

QTLTableMiner++: Semantic mining of QTL tables in scientific articles

Singh, G., Kuzniar, A., van Mulligen, E. M., Gavai, A., Bachem, C. W., Visser, R. G. F. & Finkers, R., 25 May 2018, In : BMC Bioinformatics. 19, 183.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Quantitative Trait Loci
Semantics
Ontology
Tables
Mining