Research Output

2015

candYgene: enabling precision breeding through FAIR Data

Kuzniar, A., Gavai, A. K., Ridder, L. O., Bonino da Silva Santos, L. O., Singh, G., Visser, R. G. F. & Finkers, H. J., 2015.

Research output: Contribution to conferenceAbstract

Open Access

Can Phenotyping for Water Balance Improve Breeding for Vase Life?

van Geest, G. A., van Meeteren, U. & Arens, P., 2015, Proceedings of the 25th International Eucarpia Symposium Section Ornamentals: Crossing Borders. van Huylenbroeck, J. & Dhooghe, E. (eds.). Vol. 1087. p. 149-154

Research output: Chapter in Book/Report/Conference proceedingConference paper

1 Citation (Scopus)

Cell Wall Diversity in Forage Maize: Genetic Complexity and Bioenergy Potential

Torres, A. F., Noordam-Boot, C. M. M., Dolstra, O., van der Weijde, T., Combes, E., Dufour, P., Vlaswinkel, L., Visser, R. G. F. & Trindade, L. M., 2015, In : Bio Energy Research. 8, 1, p. 187-202

Research output: Contribution to journalArticleAcademicpeer-review

17 Citations (Scopus)
Open Access
16 Citations (Scopus)

Combined biotic and abiotic stress resistance in tomato

Kissoudis, C., Chowdhury, R., van Heusden, A. W., van de Wiel, C. C. M., Finkers, H. J., Visser, R. G. F., Bai, Y. & van der Linden, C. G., 2015, In : Euphytica. 202, 2, p. 317-332

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
23 Citations (Scopus)
1 Citation (Scopus)

Corrigendum to Efficient distinction of invasive aquatic plant species from non-invasive related species using DNA barcoding

Ghahramanzadeh, R., Esselink, G. D., Kodde, L. P., Duistermaat, H., Van Valkenburg, J. L. C. H. S., Marashi, H., Smulders, M. J. M. & Van de Wiel, C. C. M., 1 Jan 2015, In : Molecular Ecology Resources. 15, 1, p. 230-230

Research output: Contribution to journalComment/Letter to the editorAcademic

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

Wolters, A. M. A., Caro Rios, C. M., Dong, S., Finkers, H. J., Gao, J., Visser, R. G. F., Wang, X., Du, Y. & Bai, Y., 2015, In : Theoretical and Applied Genetics. 128, 10, p. 1987-1997

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)
7 Citations (Scopus)

Development and analysis of an 20K SNP array for potato (Solanum tuberosum): An insight in the breeding history

Vos, P. G., Uitdewilligen, J. G. A. M. L., Voorrips, R. E., Visser, R. G. F. & van Eck, H. J., 2015, In : Theoretical and Applied Genetics. 128, 12, p. 2387-2401

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
50 Citations (Scopus)

Development of a leafy Brassica rapa fixed line collection for genetic diversity and population structure analysis

Pang, W., Li, X., Choi, S. R., Dhandapani, V., Im, S., Park, M. Y., Jang, C. S., Yang, M. S., Ham, I. K., Lee, E. M., Kim, W., Lee, S. S., Bonnema, A. B., Park, S., Piao, Z. & Lim, Y. P., 2015, In : Molecular Breeding. 35, 1, 54.

Research output: Contribution to journalArticleAcademicpeer-review

6 Citations (Scopus)

Development of the WagRhSNP AXIOM SNP Array Based on Sequences from Tetraploid Cut Roses and Garden Roses

Smulders, M. J. M., Voorrips, R. E., Esselink, G., Santos Leonardo, T. M., van 't Westende, W. P. C., Vukosavljev, M., Koning-Boucoiran, C. F. S., van de Weg, W. E., Arens, P. F. P., Schulz, D., Debener, T., Bellon, L., Mittmann, M., Pirani, A., Webster, T., Brew, F., Cox, P. & Maliepaard, C. A., 2015, Proceedings VIth International Symposiul on Rose Research and Cultivation. Debener, T. & Linde, M. (eds.). ISHS, Vol. 1064. p. 177-184

Research output: Chapter in Book/Report/Conference proceedingConference paper

5 Citations (Scopus)

Durable cisgenic resistance to Phytophthora infestans in potato and perspectives for applications in Africa

Gheysen, G., Heremans, B., van Droogenbroeck, B., Custers, R., Vossen, J. H., Visser, R. G. F., Jacobsen, E., Hutten, R. C. B. & Haverkort, A. J., 2015, Potato and sweetpotato in Africa: transforming the value chains for food and nutrition security. Low, J., Nyongesa, M., Quinn, S. & Parker, M. (eds.). Nairobi, Kenya: CABI, p. 122-127 7

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Citations (Scopus)

Effector discovery in the fungal wheat pathogen Zymoseptoria tritici

Mirzadi Gohari, A., Ware, S. B., Wittenberg, A. H. J., Mehrabi, R., Ben M'Barek, S., Verstappen, E. C. P., van der Lee, T. A. J., Robert, O., Schouten, H. J., de Wit, P. J. G. M. & Kema, G. H. J., 2015, In : Molecular Plant Pathology. 16, 9, p. 931-945

Research output: Contribution to journalArticleAcademicpeer-review

33 Citations (Scopus)

Effects of land use intensity on the natural attenuation capacity of urban soils in Beijing, China

Wang, M., Faber, J. H., Chen, W., Li, X. & Markert, B., 2015, In : Ecotoxicology and Environmental Safety. 117, p. 89-95

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)
32 Citations (Scopus)

Elicitin recognition confers enhanced resistance to Phytophthora infestans in potato

Du, J., Verzaux, E. C., Chaparro-Garcia, A., Bijsterbosch, G., Keizer, L. C. P., Zhou, J., Liebrand, T. W. H., Xie, C., Govers, F., Robatzek, S., van der Vossen, E. A. G., Jacobsen, E., Visser, R. G. F., Kamoun, S. & Vleeshouwers, V. G. A. A., 2015, In : Nature Plants. 1, 5 p., 15034.

Research output: Contribution to journalArticleAcademicpeer-review

85 Citations (Scopus)

Erratum to Stress-inducible GmGSTU4 shapes transgenic tobacco plants metabolome towards increased salinity tolerance [Acta Physiol Plant, 37, (2015), 102, DOI 10.1007/s11738-015-1852-5]

Kissoudis, C., Kalloniati, C., Pavli, O., Flemetakis, E., Madesis, P., Labrou, N. E., Scaracis, G., Tsaftaris, A. & Nianiou-Obeidat, I., 15 Jul 2015, In : Acta Physiologiae Plantarum. 37, 7, 128.

Research output: Contribution to journalArticleAcademic

2 Citations (Scopus)

Exploiting wild relatives of S. lycopersicum for quality traits

Víquez Zamora, A. M., 2015, Wageningen: Wageningen University. 167 p.

Research output: Thesisexternal PhD, WU

Open Access

Exploiting wild tomato genetic resources for resistance to Tomato Yellow Leaf Curl Virus

Caro Rios, C. M., 2015, Wageningen: Wageningen University. 187 p.

Research output: Thesisinternal PhD, WU

Open Access

Extent of genotypic variation for maize cell wall bioconversion traits across environments and among hybrid combinations

Torres, A. F., Noordam-Boot, C. M. M., Dolstra, O., Vlaswinkel, L., Visser, R. G. F. & Trindade, L. M., 2015, In : Euphytica. 206, 2, p. 501-511

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

First successful reduction of clinical allergenicity of food by genetic modification: Mal d 1 silenced apples cause fewer allergy symptoms than the wild-type cultivar

Dubois, A. E. J., Pagliarani, G., Brouwer, R. M., Kollen, B. J., Dragsted, L. O., Eriksen, F. D., Callesen, O., Gilissen, L. J. W. J., Krens, F. A., Visser, R. G. F., Smulders, M. J. M., Vlieg-Boerstra, B. J., Flokstra-de Blok, B. J. & van de Weg, W. E., 2015, In : Allergy. 70, 11, p. 1406-1412

Research output: Contribution to journalArticleAcademicpeer-review

18 Citations (Scopus)

Food Insecurity and Food Access in U.S. Metro Areas

Bonanno, A. & Li, J., 2015, In : Applied Economic Perspectives and Policy. 37, 2, p. 177-204 28 p.

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)

FPLC and liquid-chromatography mass spectrometry identify candidate necrosis-inducing proteins from culture filtrates of the fungal wheat pathogen Zymoseptoria tritici

Ben M'Barek, S., Cordewener, J. H. G., Tabib Ghaffary, M. S., van der Lee, T. A. J., Liu, Z., Mirzadi Gohari, A., Mehrabi, R., America, A. H. P., Friesen, T. L., Hamza, S., Stergiopoulos, I., de Wit, P. J. G. M. & Kema, G. H. J., 2015, In : Fungal Genetics and Biology. 79, p. 54-62

Research output: Contribution to journalArticleAcademicpeer-review

10 Citations (Scopus)

Genebanks and genomics: how to interconnect data from both communities?

Finkers, H. J., Chibon, P. Y. F. R. P., van Treuren, R., Visser, R. G. F. & van Hintum, T. J. L., 2015, In : Plant genetic resources: characterization and utilization. 13, 1, p. 90-93

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

Genetic diversity of male and female Chinese bayberry (Myrica rubra) populations and identification of sex-associated markers

Jia, H. M., Jiao, Y., Wang, G. Y., Li, Y. H., Jia, H. J., Wu, H. X., Chai, C. Y., Dong, X., Guo, Y., Zhang, L., Gao, Q. K., Chen, W., Song, L. J., van de Weg, E. & Gao, Z. S., 2015, In : BMC Genomics. 16, 394.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
16 Citations (Scopus)

Genetic mapping of resistance to Fusarium oxysporum f. sp. tulipae in tulip

Tang, N., van der Lee, T. A. J., Shahin, A., Holdinga, M. R., Bijman, P. J. J., Caser, M., Visser, R. G. F., van Tuyl, J. M. & Arens, P., 2015, In : Molecular Breeding. 35, 17 p., 122.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation

Willing, E. M., Rawat, V., Mandáková, T., Maumus, F., James, G. V., Nordström, K. J. V., Becker, C., Warthmann, N., Chica, C., Szarzynska, B., Zytnicki, M., Albani, M. C., Kiefer, C., Bergonzi, S., Castaings, L., Mateos, J. L., Berns, M. C., Bujdoso, N., Piofczyk, T., De Lorenzo, L. & 19 others, Barrero-Sicilia, C., Mateos, I., Piednoël, M., Hagmann, J., Chen-Min-Tao, R., Iglesias-Fernández, R., Schuster, S. C., Alonso-Blanco, C., Roudier, F., Carbonero, P., Paz-Ares, J., Davis, S. J., Pecinka, A., Quesneville, H., Colot, V., Lysak, M. A., Weigel, D., Coupland, G. & Schneeberger, K., 2015, In : Nature Plants. 1, 7 p., 14023.

Research output: Contribution to journalArticleAcademicpeer-review

84 Citations (Scopus)

Genome-wide analysis of the barley MAPK gene family and its expression patterns in relation to Puccinia hordei infection

Křenek, P., Niks, R. E., Vels, A., Vyplelová, P. & Šamaj, J., 2015, In : Acta Physiologiae Plantarum. 37, 11, p. 1-16 16 p., 254.

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)

Genome-Wide Mapping of Structural Variations Reveals a Copy Number Variant That Determines Reproductive Morphology in Cucumber

Zhang, Z., Mao, L., Chen, J., Bu, F., Li, G., Sun, J., Li, S., Sun, H., Jiao, C., Blakely, R., Pan, J., Cai, R., Luo, R., Van de Peer, Y., Jacobsen, E., Fei, Z. & Huang, S., 2015, In : The Plant Cell. 27, 6, p. 1595-1604

Research output: Contribution to journalArticleAcademicpeer-review

51 Citations (Scopus)

Get a taste of new talented Robust potato cultivars

Lammerts Van Bueren, E. & Janmaat, L., 2015, Louis Bolk Instituut.

Research output: Other contributionPamphlet

Open Access

Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence of synteny in the pericentromeric heterochromatin

de Boer, J. M., Datema, E., Tang, X., Borm, T. J. A., Bakker, E. H., van Eck, H. J., van Ham, R. C. H. J., de Jong, J. H. S. G. M., Visser, R. G. F. & Bachem, C. W. B., 2015, In : BMC Genomics. 16, 374.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Host plant resistance towards the cabbage whitefly in Brassica oleracea and its wild relatives

Pelgrom, K. T. B., Broekgaarden, C., Voorrips, R. E., Bas, N., Visser, R. G. F. & Vosman, B. J., 2015, In : Euphytica. 202, 2, p. 297-306

Research output: Contribution to journalArticleAcademicpeer-review

13 Citations (Scopus)

How cell wall complexity influences saccharification efficiency in Miscanthus sinensis

De Souza, A. P., Lessa Alvim Kamei, C., Torres Salvador, A. F., Pattathil, S., Hahn, M. G., Trindade, L. M. & Buckeridge, M. S., 2015, In : Journal of Experimental Botany. 66, 14, p. 4351-4365

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
40 Citations (Scopus)

Identification of candidate MLO powdery mildew susceptibility genes in cultivated Solanaceae and functional characterization of tobacco NtMLO1

Appiano, M., Pavan, S. N. C., Catalano, D., Zheng Zheng, Z., Bracuto, V., Lotti, C., Visser, R. G. F., Ricciardi, L. & Bai, Y., 2015, In : Transgenic Research. 24, 5, p. 847-858

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
29 Citations (Scopus)

Identification of novel small ncRNAs in pollen of tomato

Bokszczanin, K. L., Krezdorn, N., Fragkostefanakis, S., Müller, S., Rycak, L., Chen, Y., Hoffmeier, K., Kreutz, J., Paupière, M. J., Chaturvedi, P., Iannacone, R., Müller, F., Bostan, H., Chiusano, M. L., Scharf, K. D., Rotter, B., Schleiff, E. & Winter, P., 2015, In : BMC Genomics. 16, 19 p., 714.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
10 Citations (Scopus)

Identification of QTL markers contributing to plant growth, oil yield and fatty acid composition in the oilseed crop Jatropha curcas L.

King, A. J., Montes, L. R., Clarke, J. G., Itzep, J., Perez, C. A. A., Jongschaap, R. E. E., Visser, R. G. F., van Loo, E. N. & Graham, I. A., 2015, In : Biotechnology for Biofuels. 8, 17 p., 160.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)

Influence of plant growth stage on resistance to anthracnose in Andean lupin (Lupinus mutabilis)

Falconi, C. E., Visser, R. G. F. & Van Heusden, S., 1 Jun 2015, In : Crop and Pasture Science. 66, 7, p. 729-734 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

7 Citations (Scopus)

Karyotype variation and conservation in morphotypes of non-heading Chinese cabbage

Zheng, J. S., Sun, C. Z., Xiao, D., Zhang, S. N., Bonnema, G. & Hou, X. L., 2015, In : Plant Systematics and Evolution. 301, 7, p. 1781-1791

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Maintenance of metabolic homeostasis and induction of cytoprotectants and secondary metabolites in alachlor-treated GmGSTU4-overexpressing tobacco plants, as resolved by metabolomics

Kissoudis, C., Kalloniati, C., Flemetakis, E., Madesis, P., Labrou, N. E., Tsaftaris, A. & Nianiou-Obeidat, I., 2015, In : Plant Biotechnology Reports. 9, 5, p. 287-296

Research output: Contribution to journalArticleAcademicpeer-review

9 Citations (Scopus)

Making the difference: integrating structural variation detection tools

Lin, K., Smit, S., Bonnema, A. B., Sanchez Perez, G. F. & de Ridder, D., 2015, In : Briefings in Bioinformatics. 16, 5, p. 852-864

Research output: Contribution to journalArticleAcademicpeer-review

21 Citations (Scopus)

Managing the Colorado potato beetle; the need for resistance breeding

Maharijaya, A. & Vosman, B., 2015, In : Euphytica. 204, 3, p. 487-501

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
12 Citations (Scopus)

Mapping genes in barley for resistance to Puccinia coronata from couch grass and to P. striiformis from brome, wheat and barley

Niks, R. E., Alemu, S. K., Marcel, T. C. & van Heyzen, S., 2015, In : Euphytica. 206, 2, p. 487-499

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
8 Citations (Scopus)

Meeliften als auteur

Kleis, R., van de Vijver, C. A. D. M., Koelmans, A. A., Candel, J. J. L., Weijers, D., Visser, R. G. F. & van Arendonk, J. A. M., 2015, In : Resource: nieuwssite voor studenten en medewerkers van Wageningen UR. 9, 13, p. 18-21

Research output: Contribution to journalArticlePopular

Open Access

Molecular mapping and cloning of genes and QTLs in Brassica rapa

Bonnema, G., 2015, The Brassica rapa Genome. Springer, p. 131-144 (Compendium of plant genomes).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

1 Citation (Scopus)

Monocot and dicot MLO powdery mildew susceptibility factors are functionally conserved in spite of the evolution of class-specific molecular features

Appiano, M., Catalano, D., Santillan Martinez, M. I., Lotti, C., Zheng Zheng, Z., Visser, R. G. F., Ricciardi, L., Bai, Y. & Pavan, S. N. C., 2015, In : BMC Plant Biology. 15, 257.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
18 Citations (Scopus)

Morphological change in the Pearl River Delta, China

Zhang, W., Xu, Y., Hoitink, A. J. F., Sassi, M. G., Zheng, J., Chen, X. & Zhang, C., 2015, In : Marine Geology. 363, p. 202-219

Research output: Contribution to journalArticleAcademicpeer-review

34 Citations (Scopus)

Natural loss-of-function mutation of EDR1 conferring resistance to tomato powdery mildew in Arabidopsis thaliana accession C24

Gao, D., Appiano, M., Huibers, R. P., Loonen, A. E. H. M., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2015, In : Molecular Plant Pathology. 16, 1, p. 71-82

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)