Research Output 1924 2020

2016
16 Citations (Scopus)

Rationalization of genes for resistance to Bremia lactucae in lettuce

Parra, L., Maisonneuve, B., Lebeda, A., Schut, J., Christopoulou, M., Jeuken, M., McHale, L., Truco, M. J., Crute, I. & Michelmore, R., 2016, In : Euphytica. 210, 3, p. 309-326

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bremia lactucae
Lettuce
lettuce
R Factors
Genes
2 Citations (Scopus)

Regulating flower and tuber formation in potato with light spectrum and day length

Plantenga, F. D. M., Siakou, M., Bergonzi, S., Heuvelink, E., Bachem, C. W. B., Visser, R. G. F. & Marcelis, L. F. M., 2016, In : Acta Horticulturae. 1134, p. 267-275

Research output: Contribution to journalArticleAcademicpeer-review

tubers
photoperiod
potatoes
flowering
flowers
17 Citations (Scopus)
Open Access
Lycopersicon esculentum
biotic stress
resistance mechanisms
abiotic stress
salt stress
138 Citations (Scopus)

Role for migratory wild birds in the global spread of avian influenza H5N8

Lycett, S. J., Bodewes, R., Pohlmann, A., Banks, J., Bányai, K., Boni, M. F., Bouwstra, R. & Lu, L., 14 Oct 2016, In : Science. 354, 6309, p. 213-217

Research output: Contribution to journalArticleAcademicpeer-review

Influenza in Birds
Poultry
Birds
Orthomyxoviridae
Viruses

Role of MLO genes in susceptibility to powdery mildew in apple and grapevine

Pessina, S., 2016, Wageningen: Wageningen University. 222 p.

Research output: Thesisinternal PhD, WU

Open Access
powdery mildew
apples
genes
Podosphaera leucotricha
genotype
15 Citations (Scopus)

Silencing of six susceptibility genes results in potato late blight resistance

Sun, K., Wolters, A-M. A., Vossen, J. H., Rouwet, M. E., Loonen, A. E. H. M., Jacobsen, E., Visser, R. G. F. & Bai, Y., 2016, In : Transgenic Research. 25, 5, p. 731-742

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
Solanum tuberosum
vpr Genes
Genes
genes
1 Citation (Scopus)

Solanum venturii, a suitable model system for virus-induced gene silencing studies in potato reveals StMKK6 as an important player in plant immunity

Dobnik, D., Lazar, A., Stare, T., Gruden, K., Vleeshouwers, V. G. A. A. & Žel, J., 2016, In : Plant Methods. 12, 1, 29.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum venturii
Plant Immunity
Solanum
Gene Silencing
gene silencing

Starch meets biotechnology : in planta modification of starch composition and functionalities

Xu, X., 2016, Wageningen: Wageningen University. 169 p.

Research output: Thesisinternal PhD, WU

Open Access
Plantae
biotechnology
starch
phosphates
potato starch
89 Citations (Scopus)

Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea

Cheng, F., Sun, R., Hou, X., Zheng, H., Zhang, F., Zhang, Y., Liu, B., Liang, J., Zhuang, M., Liu, Y., Liu, D., Wang, X., Li, P., Liu, Y., Lin, K., Bucher, J., Zhang, N., Wang, Y., Wang, H., Deng, J. & 24 others, Liao, Y., Wei, K., Zhang, X., Fu, L., Hu, Y., Liu, J., Cai, C., Zhang, S., Zhang, S., Li, F., Zhang, H., Zhang, J., Guo, N., Liu, Z., Liu, J., Sun, C., Ma, Y., Zhang, H., Cui, Y., Freeling, M. R., Borm, T., Bonnema, G., Wu, J. & Wang, X., 2016, In : Nature Genetics. 48, 10, p. 1218-1224

Research output: Contribution to journalArticleAcademicpeer-review

Brassica rapa
Brassica
Brassica napus
Genome
Domestication
14 Citations (Scopus)

Supercritical CO2 extraction as an effective pretreatment step for wax extraction in a miscanthus biorefinery

Attard, T. M., McElroy, C. R., Gammons, R. J., Slattery, J. M., Supanchaiyamat, N., Kamei, C. L. A., Dolstra, O., Trindade, L. M., Bruce, N. C., McQueen-Mason, S. J., Shimizu, S. & Hunt, A. J., 7 Aug 2016, In : ACS sustainable chemistry & engineering. 4, 11, p. 5979-5988

Research output: Contribution to journalArticleAcademicpeer-review

Saccharification
policosanol
Waxes
wax
Chemical compounds

Susceptibility pays off: insights into the mlo-based powdery mildew resistance

Appiano, M., 2016, Wageningen: Wageningen University. 265 p.

Research output: Thesisinternal PhD, WU

Open Access
powdery mildew
tomatoes
loci
Oidium neolycopersici
cucumbers
2 Citations (Scopus)

Systems genetics reveals key genetic elements of drought induced gene regulation in diploid potato

van Muijen, D., Kumari, A., Maliepaard, C., Visser, R. G. F. & van der Linden, G., 2016, In : Plant, Cell & Environment. 39, 9, p. 1895-1908

Research output: Contribution to journalArticleAcademicpeer-review

Droughts
Solanum tuberosum
Diploidy
diploidy
drought

Targets and tools for optimizing lignocellulosic biomass quality of miscanthus

van der Weijde, R. T., 2016, Wageningen: Wageningen University. 231 p.

Research output: Thesisinternal PhD, WU

Open Access
Miscanthus
cell walls
polysaccharides
biomass
lignin

The allo-octoploid strawberry: simply complex

van Dijk, T., 2016, Wageningen: Wageningen University. 185 p.

Research output: Thesisinternal PhD, WU

Open Access
strawberries
flowering
quantitative trait loci
Fragaria vesca
microsatellite repeats
3 Citations (Scopus)

The association between portion size, nutrient intake and gestational weight gain: A secondary analysis in the WATCH study 2006/7

Blumfield, M. L., Schreurs, M., Rollo, M. E., Macdonald-Wicks, L. K., Kokavec, A. & Collins, C. E., 2016, In : Journal of Human Nutrition and Dietetics. 29, 3, p. 271-280

Research output: Contribution to journalArticleAcademicpeer-review

Portion Size
Weight Gain
Food
Pregnancy
Reference Values
14 Citations (Scopus)

The barley (Hordeum vulgare) cellulose synthase-like D2 gene (HvCslD2) mediates penetration resistance to host-adapted and nonhost isolates of the powdery mildew fungus

Douchkov, D., Lueck, S., Hensel, G., Kumlehn, J., Rajaraman, J., Johrde, A., Doblin, M. S., Beahan, C. T., Kopischke, M., Fuchs, R., Lipka, V., Niks, R. E., Bulone, V., Chowdhury, J., Little, A., Burton, R. A., Bacic, A., Fincher, G. B. & Schweizer, P., 2016, In : New Phytologist. 212, 2, p. 421-433

Research output: Contribution to journalArticleAcademicpeer-review

cellulose synthase
resistance to penetration
Hordeum
powdery mildew
Cell Wall
22 Citations (Scopus)

The knock-down of the expression of MdMLO19 reduces susceptibility to powdery mildew (Podosphaera leucotricha) in apple (Malus domestica)

Pessina, S., Angeli, D., Martens, S., Visser, R. G. F., Bai, Y., Salamini, F., Velasco, R., Schouten, H. J. & Malnoy, M., 2016, In : Plant Biotechnology Journal. 14, 10, p. 2033-2044

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Podosphaera leucotricha
Malus
Malus domestica
powdery mildew
apples
31 Citations (Scopus)

The MARINA model (Model to Assess River Inputs of Nutrients to seAs): Model description and results for China

Strokal, M., Kroeze, C., Wang, M., Bai, Z. & Ma, L., 15 Aug 2016, In : Science of the Total Environment. 562, p. 869-888

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Nutrients
Rivers
nutrient
river
sea
1 Citation (Scopus)

The meta-governance of organic seed regulation in the USA, European Union and Mexico

Renaud, E., Lammerts van Bueren, E. & Jiggins, J., 2016, In : International Journal of Agricultural Resources, Governance and Ecology. 12, 3, p. 262-291 30 p.

Research output: Contribution to journalArticleAcademicpeer-review

governance
European Union
Mexico
seed
seeds
17 Citations (Scopus)
Open Access
vpr Genes
Solanum
Phytophthora infestans
Solanum tuberosum
Bacterial Artificial Chromosomes
14 Citations (Scopus)

The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus

Pelkmans, J. F., Vos, A. M., Scholtmeijer, K., Hendrix, E., Baars, J. J. P., Gehrmann, T., Reinders, M. J. T., Lugones, L. G. & Wösten, H. A. B., 21 May 2016, In : Applied Microbiology and Biotechnology. 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Agaricus
Agaricales
Schizophyllum
Basidiomycota
Agrobacterium
3 Citations (Scopus)

Towards Sustainable Potato Late Blight Resistance by Cisgenic R Gene Pyramiding

Kwang-Ryong Jo, Zhu, S., Bai, Y., Hutten, R. C. B., Kessel, G. J. T., Vleeshouwers, V. G. A. A., Jacobsen, E., Visser, R. G. F. & Vossen, J. H., 2016, Plant Pathogen Resistance Biotechnology. Collinge, D. B. (ed.). Hoboken, NJ: John Wiley and Sons, p. 171-191

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

Phytophthora infestans
potatoes
genetic engineering
breeding
genes
7 Citations (Scopus)

Transcriptome Analysis of Gerbera hybrida Including in silico Confirmation of Defense Genes Found

Fu, Y., Esselink, G., Visser, R. G. F., van Tuyl, J. M. & Arens, P. F. P., 1 Mar 2016, In : Frontiers in Plant Science. 7, 247.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Gerbera
transcriptomics
disease resistance
genes
buds
10 Citations (Scopus)

Transcriptomic and proteomic analyses provide new insights into the regulation mechanism of low-temperature-induced leafy head formation in Chinese cabbage

Zhang, C. W., Wei, Y. P., Xiao, D., Gao, L. W., Lyu, S. W., Hou, X. L. & Bonnema, G., 2016, In : Journal of Proteomics. 144, p. 1-10

Research output: Contribution to journalArticleAcademicpeer-review

Brassica
Proteomics
Plant Growth Regulators
Head
Proteome

Using phenomics and genomics to unlock landrace and wild relative diversity for crop improvement

Vosman, B., Pelgrom, K. T. B., Sharma, G., Voorrips, R. E., Broekgaarden, C., Pritchard, J., May, S., Adobor, S., Castellanos-Uribe, M., van Kaauwen, M. P. W., Finkers, H. J., Janssen, B., van Workum, W. & Ford-Lloyd, B., 2016, Enhancing crop genepool use: capturing wild relative and landrace diversity for crop improvement. Maxted, N., Dulloo, M. E. & Ford-Lloyd, B. V. (eds.). CABI, p. 1-9

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

wild relatives
Aleyrodidae
landraces
Brevicoryne brassicae
plant genetic resources

Utilization of complete chloroplast genomes for phylogenetic studies

Ramlee, S. I. B., 2016, Wageningen: Wageningen University. 186 p.

Research output: Thesisinternal PhD, WU

Open Access
Paphiopedilum
phylogeny
genome
chloroplasts
Solanum lycopersicum

Werken aan diversiteit in tarwe en groenten : voor meer variatie op het veld, in het winkelschap en op het bord

Nuijten, E. & Lammerts van Bueren, E., 2016, Driebergen: Louis Bolk Instituut. 20 p. (Publicatie / Louis Bolk Instituut; no. 2016-030 LbP)

Research output: Book/ReportReportProfessional

Open Access

You say tomato, I say potato: high-quality genome assembly of the sister-group species Solanum etuberosum provides insights into genome and trait evolution

Berke, L., Grandont, L., Aflitos, S. A., Bachem, C. W. B., Becker, F. F. M., Bouwmeester, K., van de Geest, H. C., Govers, F., de Jong, H., Peters, S. A., Sanchez Perez, G. F., Schijlen, E. G. W. M., van den Berg, R. & Schranz, M. E., 2016, p. 28-29.

Research output: Contribution to conferenceAbstractAcademic

Open Access
Solanum etuberosum
genome assembly
tomatoes
potatoes
genome
2015

5 jaar Wageningen Potato Centre (WPC)

Brouwer, T. A., Tramper, M. & Visser, R. G. F., 2015

Research output: Non-textual formDigital or Visual ProductsOther research output

Open Access
39 Citations (Scopus)

Accuracy and responses of genomic selection on key traits in apple breeding

Muranty, H., Troggio, M., Ben Sadok, I., Al Rifaï, M., Auwerkerken, A., Banchi, E., Velasco, R., Stevanato, P., van de Weg, W. E., Di Guardo, M., Kumar, S., Laurens, F. & Bink, M. C. A. M., 2015, In : Horticulture Research. 2, 15060.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Malus
marker-assisted selection
Breeding
apples
Single Nucleotide Polymorphism
2 Citations (Scopus)
Mandatory Testing
Agricultural Crops
Organic Agriculture
European Union
spring wheat

A joint Laimburg - FEM molecular markers project for apple fruit quality traits using the Pedigree Based Analysis strategy

Lozano, L., Di Guardo, M., Van De Weg, W. E., Bink, M. C. A. M., Velasco, R., Costa, F. & Guerra, W., 30 Sep 2015, III International Symposium on Molecular Markers in Horticulture. Velasco, R. (ed.). International Society for Horticultural Science, p. 91-94 4 p. (Acta Horticulturae; vol. 1100).

Research output: Chapter in Book/Report/Conference proceedingConference paper

pedigree
fruit quality
apples
genetic markers
breeding

An agent-based model on disease management in potato cultivation in the Netherlands

Pacilly, F. C. A., Hofstede, G. J., Groot, J. C. J. & Lammerts Van Bueren, E., 2015. 4 p.

Research output: Contribution to conferenceConference paperAcademic

Open Access
Phytophthora infestans
Netherlands
disease control
potatoes
decision making
19 Citations (Scopus)
Phytophthora infestans
vpr Genes
Solanum tuberosum
Virulence
virulence
60 Citations (Scopus)

Applications of hydrophobins: current state and perspectives

Wösten, H. A. B. & Scholtmeijer, K., 2015, In : Applied Microbiology and Biotechnology. 99, 4, p. 1587-1597

Research output: Contribution to journalArticleAcademicpeer-review

Immunologic Factors
Recombinant Proteins
Proteins
Fungi
Gases
17 Citations (Scopus)

Assessing the genetic variation of Ty-1 and Ty-3 alleles conferring resistance to tomato yellow leaf curl virus in a broad tomato germplasm

Caro Rios, C. M., Verlaan, M. G., Julian, O., Finkers, H. J., Wolters, A. M. A., Hutton, S. F., Scott, J. W., Kormelink, R. J. M., Visser, R. G. F., Diez, M. J., Perez-de-Castro, A. & Bai, Y., 2015, In : Molecular Breeding. 35, 13 p., 132.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tomato yellow leaf curl virus
Solanum chilense
Lycopersicon esculentum
germplasm
Alleles
20 Citations (Scopus)

ASSIsT: An Automatic SNP ScorIng Tool for in- and outbreeding species

Di Guardo, M., Micheletti, D., Bianco, L., Koehorst-van Putten, H. J. J., Longhi, S., Costa, F., Aranzana, M. J., Velasco, R., Arus, P., Troggio, M. & van de Weg, W. E., 2015, In : Bioinformatics. 31, 23, p. 3873-3874

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Data visualization
Inbreeding
Scoring
Single Nucleotide Polymorphism
Pipelines

A systems genetics study of seed quality and seedling vigour in Brassica rapa

Basnet, R. K., 2015, Wageningen: Wageningen University. 177 p.

Research output: Thesisinternal PhD, WU

Open Access
Brassica rapa
seed quality
vigor
quantitative trait loci
seedlings
34 Citations (Scopus)

A transposable element insertion in the susceptibility gene CsaMLO8 results in hypocotyl resistance to powdery mildew in cucumber

Berg, J. A., Appiano, M., Santillán Martínez, M. I., Hemans, F. W. K., Vriezen, W. H., Visser, R. G. F., Bai, Y. & Schouten, H. J., 2015, In : BMC Plant Biology. 15, 17 p., 243.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
powdery mildew
transposons
hypocotyls
cucumbers
alleles
29 Citations (Scopus)

Bacterial Canker of Tomato: Current Knowledge of Detection, Management, Resistance, and Interactions

Sen, Y., van der Wolf, J. M., Visser, R. G. F. & van Heusden, A. W., 2015, In : Plant Disease. 99, 1, p. 4-13

Research output: Contribution to journalArticleAcademicpeer-review

Clavibacter
resistance management
Clavibacter michiganensis subsp. michiganensis
tomatoes
virulence
9 Citations (Scopus)

Bioethanol from maize cell walls: Genes, molecular tools, and breeding prospects

Torres, A. F., Visser, R. G. F. & Trindade, L. M., 2015, In : Global change biology Bioenergy. 7, 4, p. 591-607

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
bioethanol
Bioethanol
bioenergy
Crops
Genes

candYgene: enabling precision breeding through FAIR Data

Kuzniar, A., Gavai, A. K., Ridder, L. O., Bonino da Silva Santos, L. O., Singh, G., Visser, R. G. F. & Finkers, H. J., 2015.

Research output: Contribution to conferenceAbstractAcademic

Open Access
breeding
genes
prioritization
infrastructure
quantitative trait loci
1 Citation (Scopus)

Can Phenotyping for Water Balance Improve Breeding for Vase Life?

van Geest, G. A., van Meeteren, U. & Arens, P., 2015, Proceedings of the 25th International Eucarpia Symposium Section Ornamentals: Crossing Borders. van Huylenbroeck, J. & Dhooghe, E. (eds.). Vol. 1087. p. 149-154

Research output: Chapter in Book/Report/Conference proceedingConference paper

vase life
water balance
phenotype
breeding
weight loss
16 Citations (Scopus)

Cell Wall Diversity in Forage Maize: Genetic Complexity and Bioenergy Potential

Torres, A. F., Noordam-Boot, C. M. M., Dolstra, O., van der Weijde, T., Combes, E., Dufour, P., Vlaswinkel, L., Visser, R. G. F. & Trindade, L. M., 2015, In : Bio Energy Research. 8, 1, p. 187-202

Research output: Contribution to journalArticleAcademicpeer-review

Bioconversion
bioenergy
biotransformation
Cells
cell walls
15 Citations (Scopus)
Open Access
Phytophthora infestans
Solanum tuberosum
Chromosomes
potatoes
chromosomes
23 Citations (Scopus)

Combined biotic and abiotic stress resistance in tomato

Kissoudis, C., Chowdhury, R., van Heusden, A. W., van de Wiel, C. C. M., Finkers, H. J., Visser, R. G. F., Bai, Y. & van der Linden, C. G., 2015, In : Euphytica. 202, 2, p. 317-332

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Salt-Tolerance
Disease Resistance
Lycopersicon esculentum
biotic stress
powdery mildew
1 Citation (Scopus)
Metabolomics
Phytochemicals
Transcription
Lycopersicon esculentum
Fruits

Corrigendum to Efficient distinction of invasive aquatic plant species from non-invasive related species using DNA barcoding

Ghahramanzadeh, R., Esselink, G. D., Kodde, L. P., Duistermaat, H., Van Valkenburg, J. L. C. H. S., Marashi, H., Smulders, M. J. M. & Van de Wiel, C. C. M., 1 Jan 2015, In : Molecular Ecology Resources. 15, 1, p. 230-230

Research output: Contribution to journalComment/Letter to the editorAcademic

4 Citations (Scopus)

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

Wolters, A. M. A., Caro Rios, C. M., Dong, S., Finkers, H. J., Gao, J., Visser, R. G. F., Wang, X., Du, Y. & Bai, Y., 2015, In : Theoretical and Applied Genetics. 128, 10, p. 1987-1997

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
genome assembly
Solanum lycopersicum
Lycopersicon esculentum
introgression
Organism Cloning
7 Citations (Scopus)
Crambe Plant
Crambe abyssinica
mutagenesis
Oils
mutation