Research Output 1924 2020

2019
3 Citations (Scopus)

Genetic dissection of flowering time in Brassica rapa responses to temperature and photoperiod

Xiao, D., Shen, H. R., Zhao, J. J., Wei, Y. P., Liu, D. R., Hou, X. L. & Bonnema, G., 1 Mar 2019, In : Plant Science. 280, p. 110-119

Research output: Contribution to journalArticleAcademicpeer-review

Brassica rapa
Photoperiod
Dissection
photoperiod
flowering

Genetic Diversity of Potato Cultivars for Nitrogen Use Efficiency Under Contrasting Nitrogen Regimes

Getahun, B. B., Kassie, M. M., Visser, R. G. F. & van der Linden, G., 14 Oct 2019, In : Potato Research.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
nutrient use efficiency
Solanum tuberosum
Nitrogen
potatoes
canopy

Genetic mapping of tuber size distribution and marketable tuber yield under drought stress in potatoes

Aliche, E. B., Oortwijn, M., Theeuwen, T. P. J. M., Bachem, C. W. B., van Eck, H. J., Visser, R. G. F. & van der Linden, G., 1 Oct 2019, In : Euphytica. 215, 11, 186.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Droughts
Solanum tuberosum
chromosome mapping
tubers
water stress

Genetics and Breeding of Lupinus mutabilis: An Emerging Protein Crop

Gulisano, A., Alves, S., Martins, J. N. & Trindade, L. M., 30 Oct 2019, In : Frontiers in Plant Science. 10, 1385.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Lupinus mutabilis
breeding
crops
proteins
low input agriculture
Open Access
Tetraploidy
Quantitative Trait Loci
Genome-Wide Association Study
Solanum tuberosum
tetraploidy
4 Citations (Scopus)

Genome-Wide association studies in apple reveal loci for aroma volatiles, sugar composition, and harvest Date

Larsen, B., Migicovsky, Z., Jeppesen, A. A., Gardner, K. M., Toldam-Andersen, T. B., Myles, S., Ørgaard, M., Petersen, M. A. & Pedersen, C., 1 Jun 2019, In : Plant Genome. 12, 2, 180104.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genome-Wide Association Study
harvest date
Malus
single nucleotide polymorphism
Single Nucleotide Polymorphism

Genome-wide transcriptome analysis reveals molecular pathways involved in leafy head formation of Chinese cabbage (Brassica rapa)

Sun, X. X., Basnet, R. K., Yan, Z., Bucher, J., Cai, C., Zhao, J. & Bonnema, G., 1 Dec 2019, In : Horticulture Research. 6, 1, 130.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brassica rapa
Chinese cabbage
Brassica
Gene Expression Profiling
transcriptomics
Open Access
genomics
genome
world wide web
Solanaceae
quantitative trait loci

Glucosinolate variability between turnip organs during development

Bonnema, G., Lee, J. G., Shuhang, W., Lagarrigue, D., Bucher, J., Wehrens, R., De Vos, R. & Beekwilder, J., 1 Jun 2019, In : PLoS ONE. 14, 6, e0217862.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Glucosinolates
Brassica napus
turnips
glucosinolates
tubers

Haplotype assembly of autotetraploid potato using integer linear programing

Siragusa, E., Haiminen, N., Finkers, R., Visser, R. & Parida, L., 15 Sep 2019, In : Bioinformatics (Oxford, England). 35, 18, p. 3279-3286 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Linear Programming
Haplotype
Potato
Solanum tuberosum
Haplotypes

Haplotype estimation in polyploids using DNA sequence data

Motazedi, E., 2019, Wageningen: Wageningen University. 153 p.

Research output: Thesisinternal PhD, WU

Open Access
polyploidy
haplotypes
nucleotide sequences
inheritance (genetics)
alleles
Open Access
Solanum arcanum
plant growth
sucrose
leaf area
temperature

High-density mapping of triple rust resistance in barley using DArT-seq markers

Dracatos, P. M., Haghdoust, R., Singh, R. P., Huerta Espino, J., Barnes, C. W., Forrest, K., Hayden, M., Niks, R. E., Park, R. F. & Singh, D., 16 Apr 2019, In : Frontiers in Plant Science. 10, 467.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
leaf rust
Puccinia hordei
barley
quantitative trait loci
stem rust
2 Citations (Scopus)

High light accelerates potato flowering independently of the FT-like flowering signal StSP3D

Plantenga, F. D. M., Bergonzi, S., Bachem, C. W. B., Visser, R. G. F., Heuvelink, E. & Marcelis, L. F. M., 1 Apr 2019, In : Environmental and Experimental Botany. 160, p. 35-44

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
potato
flowering
potatoes
flower
sucrose
3 Citations (Scopus)

High resolution genetic and physical mapping of a major powdery mildew resistance locus in barley

Hoseinzadeh, P., Zhou, R., Mascher, M., Himmelbach, A., Niks, R. E., Schweizer, P. & Stein, N., 14 Feb 2019, In : Frontiers in Plant Science. 10, 146.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
physical chromosome mapping
powdery mildew
chromosome mapping
barley
loci
1 Citation (Scopus)

Host/nonhost status and genetics of resistance in barley against three pathotypes of Magnaporthe blast fungi

Aghnoum, R., Bvindi, C., Menet, G., D’hoop, B., Maciel, J. L. N. & Niks, R. E., 1 Jul 2019, In : Euphytica. 215, 7, 116.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Magnaporthe
genetic resistance
pathotypes
Hordeum
Fungi

How Does the Seasonal Cycle Control Equatorial Atlantic Interannual Variability?

Prodhomme, C., Voldoire, A., Exarchou, E., Deppenmeier, A. L., García-Serrano, J. & Guemas, V., 28 Jan 2019, In : Geophysical Research Letters. 46, 2, p. 916-922

Research output: Contribution to journalArticleAcademicpeer-review

sea surface temperature
cycles
summer
tongue
climatology

Increased virulence of Globodera pallida during repeated rearing on different resistant potato cultivars explained by a simple model

Beniers, J. E., Nöllen, Y., van Eck, H. J. & Schouten, H. J., Apr 2019, In : Plant Pathology. 68, 3, p. 445-453

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Globodera pallida
Solanum tuberosum
Virulence
rearing
virulence
1 Citation (Scopus)

In the name of the rose: a roadmap for rose research in the genome era

Smulders, M. J. M., Arens, P., Bourke, P. M., Debener, T., Linde, M., De Riek, J., Leus, L., Ruttink, T., Baudino, S., Hibrant Saint-Oyant, L., Clotault, J. & Foucher, F., 3 May 2019, In : Horticulture Research. 6, 1, 65.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Rosa
Genes
Genome
genome
Breeding
4 Citations (Scopus)

Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis

Lees, J. A., Ferwerda, B., Kremer, P. H. C., Wheeler, N. E., Valls Serón, M., Croucher, N. J., Gladstone, R. A., Bootsma, H. J., Rots, N. Y., Wijmega-Monsuur, A. J., Sanders, E. A. M., Trzciński, K., Wyllie, A. L., Zwinderman, A. H., van den Berg, L. H., van Rheenen, W., Veldink, J. H., Harboe, Z. B., Lundbo, L. F., de Groot, L. C. P. G. M. & 20 others, van Schoor, N. M., van der Velde, N., Ängquist, L. H., Sørensen, T. I. A., Nohr, E. A., Mentzer, A. J., Mills, T. C., Knight, J. C., du Plessis, M., Nzenze, S., Weiser, J. N., Parkhill, J., Madhi, S., Benfield, T., von Gottberg, A., van der Ende, A., Brouwer, M. C., Barrett, J. C., Bentley, S. D. & van de Beek, D., 15 May 2019, In : Nature Communications. 10, 1, 14 p., 2176.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
meningitis
Pneumococcal Meningitis
sequencing
pathogens
genome

Late blight: pathogen variability and disease resistance breeding in Ecuador

Delgado, R., 2019, Wageningen: Wageningen University. 136 p.

Research output: Thesisinternal PhD, WU

Open Access
Phytophthora infestans
Ecuador
disease resistance
potatoes
pathogens
7 Citations (Scopus)

Life cycle assessment of ethanol production from miscanthus: A comparison of production pathways at two European sites

Lask, J., Wagner, M., Trindade, L. M. & Lewandowski, I., Jan 2019, In : GCB Bioenergy. 11, 1, p. 269-288

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Miscanthus
life cycle assessment
ethanol production
Life cycle
ethanol
6 Citations (Scopus)

Marginal agricultural land low-input systems for biomass production

Cossel, M. V., Lewandowski, I., Elbersen, B., Staritsky, I., Van Eupen, M., Iqbal, Y., Mantel, S., Scordia, D., Testa, G., Cosentino, S. L., Maliarenko, O., Eleftheriadis, I., Zanetti, F., Monti, A., Lazdina, D., Neimane, S., Lamy, I., Ciadamidaro, L., Sanz, M., Carrasco, J. E. & 8 others, Ciria, P., McCallum, I., Trindade, L. M., Van Loo, E. N., Elbersen, W., Fernando, A. L., Papazoglou, E. G. & Alexopoulou, E., 14 Aug 2019, In : Energies. 12, 16, en12163123.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Biomass
Crops
Growth Analysis
Hemp
Requirements

Mechanical behaviour of hemp fibre composites in relation to their microstructure by micro strain mapping, computed tomography, and biochemical analysis

Fuentes, C. A., Willekens, P., Petit, J., Witters, J., Ruan, Y., Müssig, J., Trindade, L. M. & van Vuure, A. W., Dec 2019, ECCM 2018 - 18th European Conference on Composite Materials: Proceedings of a meeting held 25-28 June 2018, Athens, Greece.

Research output: Chapter in Book/Report/Conference proceedingConference paperAcademicpeer-review

Hemp fibers
Tomography
Hemp
Microstructure
Fibers
2 Citations (Scopus)
Open Access
Tylenchoidea
Meloidogyne incognita
Arabidopsis
ethylene
abiotic stress

Micropropagation of Solanum quitoense var. quitoense by apical bud, petiole and hypocotyl culture

Gutirrez, B., Cobo, M. M., Orellana, M., Vega, J., Arahana, V., Jaramillo, V. & de Lourdes Torres, M., 2019, In : Plant Biotechnology. 36, 2, p. 91-97

Research output: Contribution to journalArticleAcademicpeer-review

N-benzyladenine
Solanum quitoense
Solanum
Hypocotyl
micropropagation

Molecular characterization of Ecuadorian quinoa (Chenopodium quinoa Willd.) diversity: implications for conservation and breeding

Salazar, J., Jaramillo Roman, V., Gutierrez, B., van Loo, E. N., de Lourdes Torres, M. & Torres, A. F., 28 Feb 2019, In : Euphytica. 215, 3, 60.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Chenopodium quinoa
Ecuador
Breeding
heterozygosity
breeding
3 Citations (Scopus)

Moving perceptions on potato late blight control: Workshops with model-based scenarios

Pacilly, F. C. A., Lammerts van Bueren, E. T., Groot, J. C. J. & Hofstede, G. J., 1 May 2019, In : Crop Protection. 119, p. 76-87

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
farmers
potatoes
resistance management
collective action
1 Citation (Scopus)

Multi-allelic QTL analysis of protein content in a bi-parental population of cultivated tetraploid potato

Klaassen, M. T., Bourke, P. M., Maliepaard, C. & Trindade, L. M., 8 Jan 2019, In : Euphytica. 215, 2, 14.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tetraploidy
Quantitative Trait Loci
Solanum tuberosum
tetraploidy
quantitative trait loci
2 Citations (Scopus)

Neochloris oleoabundans cell walls have an altered composition when cultivated under different growing conditions

Rashidi, B., Dechesne, A., Rydahl, M. G., Jørgensen, B. & Trindade, L. M., 1 Jun 2019, In : Algal Research. 40, 101482.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Ettlia oleoabundans
cell walls
cell wall components
nitrogen
polysaccharides
2 Citations (Scopus)

Omics analyses of potato plant materials using an improved one-class classification tool to identify aberrant compositional profiles in risk assessment procedures

Kok, E., van Dijk, J., Voorhuijzen, M., Staats, M., Slot, M., Lommen, A., Venema, D., Pla, M., Corujo, M., Barros, E., Hutten, R., Jansen, J. & van der Voet, H., 15 Sep 2019, In : Food Chemistry. 292, p. 350-358

Research output: Contribution to journalArticleAcademicpeer-review

Solanum tuberosum
Risk assessment
risk assessment
potatoes
taxonomy

Orthologous receptor kinases quantitatively affect the host status of barley to leaf rust fungi

Wang, Y., Subedi, S., de Vries, H., Doornenbal, P., Vels, A., Hensel, G., Kumlehn, J., Johnston, P. A., Qi, X., Blilou, I., Niks, R. E. & Krattinger, S. G., 11 Nov 2019, In : Nature Plants. 5, 11, p. 1129-1135 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

leaf rust
phosphotransferases (kinases)
barley
receptors
fungi
4 Citations (Scopus)

Outlook for coeliac disease patients: towards bread wheat with hypoimmunogenic gluten by gene editing of α- and γ-gliadin gene families

Jouanin, A., Schaart, J. G., Boyd, L. A., Cockram, J., Leigh, F. J., Bates, R., Wallington, E. J., Visser, R. G. F. & Smulders, M. J. M., 1 Aug 2019, In : BMC Plant Biology. 19, 1, 1 p., 333.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
celiac disease
gliadin
gluten
epitopes
wheat
1 Citation (Scopus)

Patterns of Transmission Ratio Distortion in Interspecific Lettuce Hybrids Reveal a Sex-Independent Gametophytic Barrier

Giesbers, A. K. J., den Boer, E., Ulen, J., van Kaauwen, M. P. W., Visser, R. G. F., Niks, R. E. & Jeuken, M. J. W., 1 Jan 2019, In : Genetics. 211, 1, p. 263-276

Research output: Contribution to journalArticleAcademicpeer-review

Lettuce
Alleles
Ovule
Haploidy
Pollen

Phenotypic Variation of Cell Wall Composition and Stem Morphology in Hemp (Cannabis sativa L.): Optimization of Methods

Petit, J., Gulisano, A., Dechesne, A. & Trindade, L. M., 25 Jul 2019, In : Frontiers in Plant Science. 10, 959.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cannabis sativa
hemp
system optimization
cell wall components
phenotypic variation
8 Citations (Scopus)

Phytophthora infestans RXLR effectors act in concert at diverse subcellular locations to enhance host colonization

Wang, S., McLellan, H., Bukharova, T., He, Q., Murphy, F., Shi, J., Sun, S., van Weymers, P., Ren, Y., Thilliez, G., Wang, H., Chen, X., Engelhardt, S., Vleeshouwers, V., Gilroy, E. M., Whisson, S. C., Hein, I., Wang, X., Tian, Z., Birch, P. R. J. & 1 others, Boevink, P. C., 1 Jan 2019, In : Journal of Experimental Botany. 70, 1, p. 343-356

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
Nicotiana benthamiana
Tobacco
pathogens
Infection
8 Citations (Scopus)

Plant science: A regulatory circuit conferring varied flowering response to cold in annual and perennial plants

Hyun, Y., Vincent, C., Tilmes, V., Bergonzi, S., Kiefer, C., Richter, R., Martinez-Gallegos, R., Severing, E. & Coupland, G., 25 Jan 2019, In : Science. 363, 6425, p. 409-412 4 p.

Research output: Contribution to journalArticleAcademicpeer-review

Arabis
Carrier Proteins
Clustered Regularly Interspaced Short Palindromic Repeats
Germination
Reproduction
2 Citations (Scopus)

Propolis modulates the gut microbiota and improves the intestinal mucosal barrier function in diabetic rats

Xue, M., Liu, Y., Xu, H., Zhou, Z., Ma, Y., Sun, T., Liu, M., Zhang, H. & Liang, H., Oct 2019, In : Biomedicine and Pharmacotherapy. 118, 109393.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Propolis
Ileum
Tight Junction Proteins
Volatile Fatty Acids
Intestinal Mucosa
5 Citations (Scopus)

QTL mapping of insect resistance components of Solanum galapagense

Vosman, B., Kashaninia, A., van’t Westende, W., Meijer-Dekens, F., van Eekelen, H., Visser, R. G. F., de Vos, R. C. H. & Voorrips, R. E., Feb 2019, In : Theoretical and Applied Genetics. 132, 2, p. 531–541

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum galapagense
Trichomes
Solanum
trichomes
Insects

Qualitative and quantitative differences in osmolytes accumulation and antioxidant activities in response to water deficit in four mediterranean limonium species

González-Orenga, S., Al Hassan, M., Llinares, J. V., Lisón, P., López-Gresa, P. M., Verdeguer, M., Vicente, O. & Boscaiu, M., 15 Nov 2019, In : Plants. 8, 11, 506.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Limonium
antioxidant
antioxidant activity
drought
ion

Quantifying the Power and Precision of QTL Analysis in Autopolyploids Under Bivalent and Multivalent Genetic Models

Bourke, P. M., Hackett, C. A., Voorrips, R. E., Visser, R. G. F. & Maliepaard, C., 9 Jul 2019, In : G3 (Bethesda, Md.). 9, 7, p. 2107-2122 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Quantitative Trait Loci
Genetic Models
Meiosis
Solanum tuberosum
Polyploidy
3 Citations (Scopus)

Role of wind stress in driving SST biases in the Tropical Atlantic

Voldoire, A., Exarchou, E., Sanchez-Gomez, E., Demissie, T., Deppenmeier, A. L., Frauen, C., Goubanova, K., Hazeleger, W., Keenlyside, N., Koseki, S., Prodhomme, C., Shonk, J., Toniazzo, T. & Traoré, A. K., Sep 2019, In : Climate Dynamics. 53, 5-6, p. 3481-3504

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
wind stress
sea surface temperature
climate modeling
heat flux
climate

Shoot sodium exclusion in salt stressed barley (Hordeum vulgare L.) is determined by allele specific increased expression of HKT1;5

van Bezouw, R. F. H. M., Janssen, E. M., Ashrafuzzaman, M., Ghahramanzadeh, R., Kilian, B., Graner, A., Visser, R. G. F. & van der Linden, G., Oct 2019, In : Journal of Plant Physiology. 241, 153029.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Hordeum
Hordeum vulgare
Salts
Sodium
Alleles
1 Citation (Scopus)

Some thoughts on how to use markers in tetraploid rose breeding

Smulders, M. J. M., van de Weg, W. E., Bourke, P. M., Voorrips, R. E., Arens, P. & Maliepaard, C., 1 Jan 2019, In : Acta Horticulturae. 1232, p. 1-6

Research output: Contribution to journalArticleAcademicpeer-review

tetraploidy
Rosa
alleles
breeding
genotyping
6 Citations (Scopus)

Source-Sink Regulation Is Mediated by Interaction of an FT Homolog with a SWEET Protein in Potato

Abelenda Vila, J. A., Bergonzi, S., Oortwijn, M. E. P., Sonnewald, S., Du, M., Visser, R. G. F., Sonnewald, U. & Bachem, C. W. B., 1 Apr 2019, In : Current Biology. 29, 7, p. 1176-1186

Research output: Contribution to journalArticleAcademicpeer-review

potato protein
Solanum tuberosum
Sucrose
sucrose
tubers

Storage of fungal treated lignocellulosic biomass and its acceptance by goats

Mao, L., 2019, Wageningen: Wageningen University. 156 p.

Research output: Thesisinternal PhD, WU

wheat straw
goats
Ceriporiopsis subvermispora
biomass
lignin

The battle between pepper and aphid: Genetics and mechanism of host plant resistance

Sun, M., 2019, Wageningen: Wageningen University. 126 p.

Research output: Thesisinternal PhD, WU

Open Access
pepper
Aphidoidea
Myzus persicae
host plants
crops
1 Citation (Scopus)

The complex interactions between flowering behavior and fiber quality in hemp

Salentijn, E. M. J., Petit, J. & Trindade, L. M., 16 Apr 2019, In : Frontiers in Plant Science. 10, 614.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
hemp
fiber quality
flowering
gender
photoperiod