Research Output

Abstract

Effector-driven breeding for broad-spectrum disease

Vleeshouwers, V. G. A. A., Du, J., Domazakis, E., Chaparro-Garcia, A., Lin, X., Dong, S., Wouters, D., Joosten, M. H. A. J., Kamoun, S. & Visser, R. G. F., 2014, Book of Abstracts XVI International Congress on Molecular Plant-Microbe Interactions. p. 38

Research output: Chapter in Book/Report/Conference proceedingAbstract

ELR interacts with sobir1 to mount defense responses against phytophthora infestans in potato

Domazakis, E., Joosten, M. H. A. J., Wouters, T. C. A. E., Kamoun, S., Visser, R. G. F. & Vleeshouwers, V. G. A. A., 30 Nov 2016, p. 165.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Potato SOBIR1 and SOBIR1-like interact with the elicitin-response receptor (ELR) of potato and are involved in the response to INF1 elicitin of Phytophthora infestans

Domazakis, E., Du, J., Liebrand, T. W. H., Chaparro-Garcia, A., Visser, R. G. F., Kamoun, S., Joosten, M. H. A. J. & Vleeshouwers, V. G. A. A., 2014, Book of Abstracts XVI International Congress on Molecular Plant-Microbe Interactions. p. 117

Research output: Chapter in Book/Report/Conference proceedingAbstract

Article

A common genetic mechanism underlies morphological diversity in fruits and other plant organs

Wu, S., Zhang, B., Keyhaninejad, N., Rodríguez, G. R., Kim, H. J., Chakrabarti, M., Illa-Berenguer, E., Taitano, N. K., Gonzalo, M. J., Díaz, A., Pan, Y., Leisner, C. P., Halterman, D., Buell, C. R., Weng, Y., Jansky, S. H., van Eck, H., Willemsen, J., Monforte, A. J., Meulia, T. & 1 others, van der Knaap, E., 1 Dec 2018, In : Nature Communications. 9, 1, 4734.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
30 Citations (Scopus)

Activation tagging of ATHB13 in Arabidopsis thaliana confers broad-spectrum disease resistance

Gao, D., Huibers, R. P., Chen, X., Loonen, A. E. H. M., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2014, In : Plant Molecular Biology. 86, 6, p. 641-653

Research output: Contribution to journalArticleAcademicpeer-review

18 Citations (Scopus)

Agroinfiltration and PVX Agroinfection in Potato and Nicotiana benthamiana

Du, J., Rietman, H. & Vleeshouwers, V. G. A. A., 2014, In : Journal of Visualized Experiments. 83, 7 p., e50971.

Research output: Contribution to journalArticleAcademicpeer-review

29 Citations (Scopus)
Open Access

A Next-Generation Sequencing Method for Genotyping-by-Sequencing of Highly Heterozygous Autotetraploid Potato

Uitdewilligen, J. G. A. M. L., Wolters, A. M. A., D'hoop, B. B., Borm, T. J. A., Visser, R. G. F. & van Eck, H. J., 2013, In : PLoS ONE. 8, 5, 14 p., e62355.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
167 Citations (Scopus)
21 Citations (Scopus)

Assessing the genetic variation of Ty-1 and Ty-3 alleles conferring resistance to tomato yellow leaf curl virus in a broad tomato germplasm

Caro Rios, C. M., Verlaan, M. G., Julian, O., Finkers, H. J., Wolters, A. M. A., Hutton, S. F., Scott, J. W., Kormelink, R. J. M., Visser, R. G. F., Diez, M. J., Perez-de-Castro, A. & Bai, Y., 2015, In : Molecular Breeding. 35, 13 p., 132.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
18 Citations (Scopus)

Characterization and Transcriptional Profile of Genes Involved in Glycoalkaloid Biosynthesis in New Varieties of Solanum tuberosum L.

Mariot, R. F., De Oliveira, L. A., Voorhuijzen, M. M., Staats, M., Hutten, R. C. B., Van Dijk, J. P., Kok, E. J. & Frazzon, J., 2016, In : Journal of Agricultural and Food Chemistry. 64, 4, p. 988-996

Research output: Contribution to journalArticleAcademicpeer-review

5 Citations (Scopus)
Open Access
4 Citations (Scopus)

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

Wolters, A. M. A., Caro Rios, C. M., Dong, S., Finkers, H. J., Gao, J., Visser, R. G. F., Wang, X., Du, Y. & Bai, Y., 2015, In : Theoretical and Applied Genetics. 128, 10, p. 1987-1997

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Development and analysis of an 20K SNP array for potato (Solanum tuberosum): An insight in the breeding history

Vos, P. G., Uitdewilligen, J. G. A. M. L., Voorrips, R. E., Visser, R. G. F. & van Eck, H. J., 2015, In : Theoretical and Applied Genetics. 128, 12, p. 2387-2401

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
56 Citations (Scopus)

Discovering novel Alternaria solani succinate dehydrogenase inhibitors by in silico modeling and virtual screening strategies to combat early blight

Iftikhar, S., Shahid, A. A., Halim, S. A., Wolters, P. J., Vleeshouwers, V. G. A. A., Khan, A., Al-Harrasi, A. & Ahmad, S., 17 Nov 2017, In : Frontiers in Chemistry. 5, 100.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Down-regulation of acetolactate synthase compromises OI-1- mediated resistance to powdery mildew in tomato

Gao, D., Huibers, R. P., Loonen, A. E. H. M., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2014, In : BMC Plant Biology. 14, 11 p., 32.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
11 Citations (Scopus)
Open Access
17 Citations (Scopus)
Open Access
61 Citations (Scopus)

Effector-driven marker development and cloning of resistance genes against Phytophthora infestans in potato breeding clone SW93-1015

Lenman, M., Ali, A., Mühlenbock, P., Carlson-Nilsson, U., Liljeroth, E., Champouret, N., Vleeshouwers, V. G. A. A. & Andreasson, E., 2016, In : Theoretical and Applied Genetics. 129, 1, p. 105-115

Research output: Contribution to journalArticleAcademicpeer-review

19 Citations (Scopus)

Effectors as Tools in Disease Resistance Breeding Against Biotrophic, Hemibiotrophic, and Necrotrophic Plant Pathogens

Vleeshouwers, V. G. A. A. & Oliver, R. P., 2014, In : Molecular Plant-Microbe Interactions. 27, 3, p. 196-206

Research output: Contribution to journalArticleAcademicpeer-review

165 Citations (Scopus)

Elicitin recognition confers enhanced resistance to Phytophthora infestans in potato

Du, J., Verzaux, E. C., Chaparro-Garcia, A., Bijsterbosch, G., Keizer, L. C. P., Zhou, J., Liebrand, T. W. H., Xie, C., Govers, F., Robatzek, S., van der Vossen, E. A. G., Jacobsen, E., Visser, R. G. F., Kamoun, S. & Vleeshouwers, V. G. A. A., 2015, In : Nature Plants. 1, 5 p., 15034.

Research output: Contribution to journalArticleAcademicpeer-review

99 Citations (Scopus)

Evaluation of LD decay and various LD-decay estimators in simulated and SNP-array data of tetraploid potato

Vos, P. G., Paulo, M. J., Voorrips, R. E., Visser, R. G. F., van Eck, H. J. & van Eeuwijk, F. A., 2017, In : Theoretical and Applied Genetics. 130, 1, p. 123-135

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
39 Citations (Scopus)

Evidence for selection pressure from resistant potato genotypes but not from fungicide application within a clonal Phytophthora infestans population

Stellingwerf, J. S., Phelan, S., Doohan, F. M., Ortiz, V., Griffin, D., Bourke, A., Hutten, R. C. B., Cooke, D. E. L., Kildea, S. & Mullins, E., Sep 2018, In : Plant Pathology. 67, 7, p. 1528-1538

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Functional analysis of potato genes involved in quantitative resistance to Phytophthora infestans

Du, J., Tian, Z. D., Liu, J., Vleeshouwers, V. G. A. A., Shi, X. L. & Xie, C. H., 2013, In : Molecular Biology Reports. 40, 2, p. 957-967

Research output: Contribution to journalArticleAcademicpeer-review

12 Citations (Scopus)

Functional characterization of a syntaxin involved in tomato (Solanum lycopersicum) resistance against powdery mildew

Bracuto, V., Appiano, M., Zheng, Z., Wolters, A-M. A., Yan, Z., Ricciardi, L., Visser, R. G. F., Pavan, S. & Bai, Y., 20 Sep 2017, In : Frontiers in Plant Science. 8, 10 p., 1573.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)
Open Access
11 Citations (Scopus)

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen

Pais, M., Yoshida, K., Giannakopoulou, A., Pel, M. A., Cano, L. M., Oliva, R. F., Witek, K., Lindqvist-Kreuze, H., Vleeshouwers, V. G. A. A. & Kamoun, S., 5 Jul 2018, In : BMC Evolutionary Biology. 18, 1, 93.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
14 Citations (Scopus)

Genetics and molecular mechanisms of resistance to powdery mildews in tomato (Solanum lycopersicum) and its wild relatives

Seifi Abdolabad, A. R., Dongli Gao, D., Zheng, Z., Pavan, S. N. C., Faino, L., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2014, In : European Journal of Plant Pathology. 138, 3, p. 641-665

Research output: Contribution to journalArticleAcademicpeer-review

20 Citations (Scopus)

Genome-wide study of the tomato SlMLO gene family and its functional characterization in response to the powdery mildew fungus oidium neolycopersici

Zheng, Z., Appiano, M., Pavan, S., Bracuto, V., Ricciardi, L., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2016, In : Frontiers in Plant Science. 7, A380.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
25 Citations (Scopus)

Genotypic differences in metabolomic changes during storage induced-degreening of chrysanthemum disk florets

van Geest, G., Choi, Y. H., Arens, P., Post, A., Liu, Y. & van Meeteren, U., 2016, In : Postharvest Biology and Technology. 115, p. 48-59

Research output: Contribution to journalArticleAcademicpeer-review

8 Citations (Scopus)

Graphical genotyping as a method to map Ny(o,n)sto and Gpa5 using a reference panel of tetraploid potato cultivars

van Eck, H. J., Vos, P. G., Valkonen, J. P. T., Uitdewilligen, J. G. A. M. L., Lensing, H., de Vetten, N. & Visser, R. G. F., 2017, In : Theoretical and Applied Genetics. 130, 3, p. 515-528

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)

Hevige phytophthora-uitbraak 2016 benadrukt noodzaak resistente rassen

Lammerts Van Bueren, E., Hutten, R. C. B. & Engelen, C. J. M., 2016, In : Aardappelwereld. 2016, 9, p. 32-33

Research output: Contribution to journalArticleProfessional

Open Access

Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence of synteny in the pericentromeric heterochromatin

de Boer, J. M., Datema, E., Tang, X., Borm, T. J. A., Bakker, E. H., van Eck, H. J., van Ham, R. C. H. J., de Jong, J. H. S. G. M., Visser, R. G. F. & Bachem, C. W. B., 2015, In : BMC Genomics. 16, 374.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

Increased difficulties to control late blight in Tunisia are caused by a genetically diverse Phytophthora infestans population next to the clonal lineage NA-01

Harbaoui, K., Hamada, W., Li, Y., Vleeshouwers, V. G. A. A. & van der Lee, T. A. J., 2014, In : Plant Disease. 98, 7, p. 898-908

Research output: Contribution to journalArticleAcademicpeer-review

9 Citations (Scopus)

Natural loss-of-function mutation of EDR1 conferring resistance to tomato powdery mildew in Arabidopsis thaliana accession C24

Gao, D., Appiano, M., Huibers, R. P., Loonen, A. E. H. M., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2015, In : Molecular Plant Pathology. 16, 1, p. 71-82

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Nine things to know about elicitins

Derevnina, L., Dagdas, Y. F., De la Concepcion, J. C., Bialas, A., Kellner, R., Petre, B., Domazakis, E., Du, J., Wu, C. H., Lin, X., Aguilera-Galvez, C., Cruz-Mireles, N., Vleeshouwers, V. G. A. A. & Kamoun, S., 2016, In : New Phytologist. 212, 4, p. 888-895

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
33 Citations (Scopus)

Omics analyses of potato plant materials using an improved one-class classification tool to identify aberrant compositional profiles in risk assessment procedures

Kok, E., van Dijk, J., Voorhuijzen, M., Staats, M., Slot, M., Lommen, A., Venema, D., Pla, M., Corujo, M., Barros, E., Hutten, R., Jansen, J. & van der Voet, H., 15 Sep 2019, In : Food Chemistry. 292, p. 350-358

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

Plant immunity switched from bacteria to virus

Giannakopoulou, A., Bialas, A., Kamoun, S. & Vleeshouwers, V. G. A. A., 2016, In : Nature Biotechnology. 34, 4, p. 391-392

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

Possibilities and challenges of the potato genome sequence

Visser, R. G. F., Bachem, C. W. B., Borm, T. J. A., de Boer, J. M., van Eck, H. J., Finkers, H. J., van der Linden, G., Maliepaard, C. A., Uitdewilligen, J. G. A. M. L., Voorrips, R. E., Vos, P. G. & Wolters, A. M. A., 2014, In : Potato Research. 57, 3-4, p. 327-330

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Profiling of Nutritional and Health-Related Compounds in Oat Varieties

van den Broeck, H. C., Londono Cardona, D. M., Timmer, R. D., Smulders, M. J. M., Gilissen, L. J. W. J. & van der Meer, I. M., 2015, In : Foods. 5, 2, 11 p., nr 2 Communication.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

QTL mapping in diploid potato by using selfed progenies of the cross S. tuberosum × S. chacoense

Meijer, D., Viquez-Zamora, M., van Eck, H. J., Hutten, R. C. B., Su, Y., Rothengatter, R., Visser, R. G. F., Lindhout, W. H. & van Heusden, A. W., Jul 2018, In : Euphytica. 214, 7, 121.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
3 Citations (Scopus)

Resistance to tomato yellow leaf curl virus in tomato germplasm

Yan, Z., Pérez-de-Castro, A., Díez, M. J., Hutton, S. F., Visser, R. G. F., Wolters, A-M. A., Bai, Y. & Li, J., 20 Aug 2018, In : Frontiers in Plant Science. 9, 1198.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Role for migratory wild birds in the global spread of avian influenza H5N8

Lycett, S. J., Bodewes, R., Pohlmann, A., Banks, J., Bányai, K., Boni, M. F., Bouwstra, R. & Lu, L., 14 Oct 2016, In : Science. 354, 6309, p. 213-217

Research output: Contribution to journalArticleAcademicpeer-review

155 Citations (Scopus)

Safety assessment of plant varieties using transcriptomics profiling and a one-class classifier

van Dijk, J. P., de Mello, C. S., Voorthuijzen, M. M., Hutten, R. C. B., Maisonnave Arisi, A. C., Jansen, J. J., Buydens, L. M. C., van der Voet, H. & Kok, E. J., 2014, In : Regulatory Toxicology and Pharmacology. 70, 1, p. 297-303

Research output: Contribution to journalArticleAcademicpeer-review

12 Citations (Scopus)

Selection of reference genes for transcriptional analysis of edible tubers of potato (Solanum tuberosum L.)

Mariot, R. F., De Oliveira, L. A., Voorhuijzen, M. M., Staats, M., Hutten, R. C. B., Van Dijk, J. P., Kok, E. & Frazzon, J., 2015, In : PLoS ONE. 10, 4, 13 p., e0120854.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)
Open Access
2 Citations (Scopus)

Silencing of six susceptibility genes results in potato late blight resistance

Sun, K., Wolters, A-M. A., Vossen, J. H., Rouwet, M. E., Loonen, A. E. H. M., Jacobsen, E., Visser, R. G. F. & Bai, Y., 2016, In : Transgenic Research. 25, 5, p. 731-742

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
22 Citations (Scopus)

Solanum venturii, a suitable model system for virus-induced gene silencing studies in potato reveals StMKK6 as an important player in plant immunity

Dobnik, D., Lazar, A., Stare, T., Gruden, K., Vleeshouwers, V. G. A. A. & Žel, J., 2016, In : Plant Methods. 12, 1, 29.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)
13 Citations (Scopus)

Tracking disease resistance deployment in potato breeding by enrichment sequencing

Armstrong, M. R., Vossen, J., Lim, T. Y., Hutten, R. C. B., Xu, J., Strachan, S. M., Harrower, B., Champouret, N., Gilroy, E. M. & Hein, I., Feb 2019, In : Plant Biotechnology Journal. 17, 2, p. 540-549

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)