Research Output

2019
Open Access
Open Access
5 Citations (Scopus)

Omics analyses of potato plant materials using an improved one-class classification tool to identify aberrant compositional profiles in risk assessment procedures

Kok, E., van Dijk, J., Voorhuijzen, M., Staats, M., Slot, M., Lommen, A., Venema, D., Pla, M., Corujo, M., Barros, E., Hutten, R., Jansen, J. & van der Voet, H., 15 Sep 2019, In : Food Chemistry. 292, p. 350-358

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

Tracking disease resistance deployment in potato breeding by enrichment sequencing

Armstrong, M. R., Vossen, J., Lim, T. Y., Hutten, R. C. B., Xu, J., Strachan, S. M., Harrower, B., Champouret, N., Gilroy, E. M. & Hein, I., Feb 2019, In : Plant Biotechnology Journal. 17, 2, p. 540-549

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
15 Citations (Scopus)
2018

A common genetic mechanism underlies morphological diversity in fruits and other plant organs

Wu, S., Zhang, B., Keyhaninejad, N., Rodríguez, G. R., Kim, H. J., Chakrabarti, M., Illa-Berenguer, E., Taitano, N. K., Gonzalo, M. J., Díaz, A., Pan, Y., Leisner, C. P., Halterman, D., Buell, C. R., Weng, Y., Jansky, S. H., van Eck, H., Willemsen, J., Monforte, A. J., Meulia, T. & 1 others, van der Knaap, E., 1 Dec 2018, In : Nature Communications. 9, 1, 4734.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
33 Citations (Scopus)
Open Access

Evidence for selection pressure from resistant potato genotypes but not from fungicide application within a clonal Phytophthora infestans population

Stellingwerf, J. S., Phelan, S., Doohan, F. M., Ortiz, V., Griffin, D., Bourke, A., Hutten, R. C. B., Cooke, D. E. L., Kildea, S. & Mullins, E., Sep 2018, In : Plant Pathology. 67, 7, p. 1528-1538

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)
Open Access
11 Citations (Scopus)

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen

Pais, M., Yoshida, K., Giannakopoulou, A., Pel, M. A., Cano, L. M., Oliva, R. F., Witek, K., Lindqvist-Kreuze, H., Vleeshouwers, V. G. A. A. & Kamoun, S., 5 Jul 2018, In : BMC Evolutionary Biology. 18, 1, 93.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
15 Citations (Scopus)

QTL mapping in diploid potato by using selfed progenies of the cross S. tuberosum × S. chacoense

Meijer, D., Viquez-Zamora, M., van Eck, H. J., Hutten, R. C. B., Su, Y., Rothengatter, R., Visser, R. G. F., Lindhout, W. H. & van Heusden, A. W., Jul 2018, In : Euphytica. 214, 7, 121.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Resistance to tomato yellow leaf curl virus in tomato germplasm

Yan, Z., Pérez-de-Castro, A., Díez, M. J., Hutton, S. F., Visser, R. G. F., Wolters, A-M. A., Bai, Y. & Li, J., 20 Aug 2018, In : Frontiers in Plant Science. 9, 1198.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)
13 Citations (Scopus)

The identification of allelic variation in potato

Willemsen, J., 2018, Wageningen: Wageningen University. 206 p.

Research output: Thesisinternal PhD, WU

Two different R gene loci co-evolved with Avr2 of Phytophthora infestans and confer distinct resistance specificities in potato

Aguilera-Galvez, C., Champouret, N., Rietman, H., Lin, X., Wouters, D., Chu, Z., Jones, J. D. G., Vossen, J. H., Visser, R. G. F., Wolters, P. J. & Vleeshouwers, V. G. A. A., 1 Mar 2018, In : Studies in Mycology. 89, p. 105-115

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)

Unravelling the elicitin perception pathway against Phytophthora in potato

Domazakis, E., 2018, Wageningen: Wageningen University. 167 p.

Research output: Thesisinternal PhD, WU

Open Access
Open Access

Discovering novel Alternaria solani succinate dehydrogenase inhibitors by in silico modeling and virtual screening strategies to combat early blight

Iftikhar, S., Shahid, A. A., Halim, S. A., Wolters, P. J., Vleeshouwers, V. G. A. A., Khan, A., Al-Harrasi, A. & Ahmad, S., 17 Nov 2017, In : Frontiers in Chemistry. 5, 100.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Effectoromics-based identification of cell surface receptors in potato

Domazakis, E., Lin, X., Aguilera-Galvez, C., Wouters, D., Bijsterbosch, G., Wolters, P. J. & Vleeshouwers, V. G. A. A., 2017, Plant Pattern Recognition Receptors: Methods and Protocols. Shan, L. & He, P. (eds.). Humana Press Inc., Vol. 1578. p. 337-353 (Methods in Molecular Biology; vol. 1578).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

7 Citations (Scopus)

Evaluation of LD decay and various LD-decay estimators in simulated and SNP-array data of tetraploid potato

Vos, P. G., Paulo, M. J., Voorrips, R. E., Visser, R. G. F., van Eck, H. J. & van Eeuwijk, F. A., 2017, In : Theoretical and Applied Genetics. 130, 1, p. 123-135

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
42 Citations (Scopus)

Functional characterization of a syntaxin involved in tomato (Solanum lycopersicum) resistance against powdery mildew

Bracuto, V., Appiano, M., Zheng, Z., Wolters, A-M. A., Yan, Z., Ricciardi, L., Visser, R. G. F., Pavan, S. & Bai, Y., 20 Sep 2017, In : Frontiers in Plant Science. 8, 10 p., 1573.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Graphical genotyping as a method to map Ny(o,n)sto and Gpa5 using a reference panel of tetraploid potato cultivars

van Eck, H. J., Vos, P. G., Valkonen, J. P. T., Uitdewilligen, J. G. A. M. L., Lensing, H., de Vetten, N. & Visser, R. G. F., 2017, In : Theoretical and Applied Genetics. 130, 3, p. 515-528

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)
Open Access
2 Citations (Scopus)
2016

Characterization and Transcriptional Profile of Genes Involved in Glycoalkaloid Biosynthesis in New Varieties of Solanum tuberosum L.

Mariot, R. F., De Oliveira, L. A., Voorhuijzen, M. M., Staats, M., Hutten, R. C. B., Van Dijk, J. P., Kok, E. J. & Frazzon, J., 2016, In : Journal of Agricultural and Food Chemistry. 64, 4, p. 988-996

Research output: Contribution to journalArticleAcademicpeer-review

6 Citations (Scopus)

Development and application of a 20K SNP array in potato

Vos, P., 2016, Wageningen: Wageningen University. 166 p.

Research output: Thesisinternal PhD, WU

Open Access
Open Access
17 Citations (Scopus)
Open Access
63 Citations (Scopus)

Effector-driven marker development and cloning of resistance genes against Phytophthora infestans in potato breeding clone SW93-1015

Lenman, M., Ali, A., Mühlenbock, P., Carlson-Nilsson, U., Liljeroth, E., Champouret, N., Vleeshouwers, V. G. A. A. & Andreasson, E., 2016, In : Theoretical and Applied Genetics. 129, 1, p. 105-115

Research output: Contribution to journalArticleAcademicpeer-review

19 Citations (Scopus)

ELR interacts with sobir1 to mount defense responses against phytophthora infestans in potato

Domazakis, E., Joosten, M. H. A. J., Wouters, T. C. A. E., Kamoun, S., Visser, R. G. F. & Vleeshouwers, V. G. A. A., 30 Nov 2016, p. 165.

Research output: Contribution to conferenceAbstractAcademic

Open Access

Genome-wide study of the tomato SlMLO gene family and its functional characterization in response to the powdery mildew fungus oidium neolycopersici

Zheng, Z., Appiano, M., Pavan, S., Bracuto, V., Ricciardi, L., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2016, In : Frontiers in Plant Science. 7, A380.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
26 Citations (Scopus)

Genotypic differences in metabolomic changes during storage induced-degreening of chrysanthemum disk florets

van Geest, G., Choi, Y. H., Arens, P., Post, A., Liu, Y. & van Meeteren, U., 2016, In : Postharvest Biology and Technology. 115, p. 48-59

Research output: Contribution to journalArticleAcademicpeer-review

8 Citations (Scopus)

Hevige phytophthora-uitbraak 2016 benadrukt noodzaak resistente rassen

Lammerts Van Bueren, E., Hutten, R. C. B. & Engelen, C. J. M., 2016, In : Aardappelwereld. 2016, 9, p. 32-33

Research output: Contribution to journalArticleProfessional

Open Access

Nine things to know about elicitins

Derevnina, L., Dagdas, Y. F., De la Concepcion, J. C., Bialas, A., Kellner, R., Petre, B., Domazakis, E., Du, J., Wu, C. H., Lin, X., Aguilera-Galvez, C., Cruz-Mireles, N., Vleeshouwers, V. G. A. A. & Kamoun, S., 2016, In : New Phytologist. 212, 4, p. 888-895

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
33 Citations (Scopus)

Plant immunity switched from bacteria to virus

Giannakopoulou, A., Bialas, A., Kamoun, S. & Vleeshouwers, V. G. A. A., 2016, In : Nature Biotechnology. 34, 4, p. 391-392

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

Role for migratory wild birds in the global spread of avian influenza H5N8

Lycett, S. J., Bodewes, R., Pohlmann, A., Banks, J., Bányai, K., Boni, M. F., Bouwstra, R. & Lu, L., 14 Oct 2016, In : Science. 354, 6309, p. 213-217

Research output: Contribution to journalArticleAcademicpeer-review

157 Citations (Scopus)

Silencing of six susceptibility genes results in potato late blight resistance

Sun, K., Wolters, A-M. A., Vossen, J. H., Rouwet, M. E., Loonen, A. E. H. M., Jacobsen, E., Visser, R. G. F. & Bai, Y., 2016, In : Transgenic Research. 25, 5, p. 731-742

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
24 Citations (Scopus)

Solanum venturii, a suitable model system for virus-induced gene silencing studies in potato reveals StMKK6 as an important player in plant immunity

Dobnik, D., Lazar, A., Stare, T., Gruden, K., Vleeshouwers, V. G. A. A. & Žel, J., 2016, In : Plant Methods. 12, 1, 29.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Susceptibility pays off: insights into the mlo-based powdery mildew resistance

Appiano, M., 2016, Wageningen: Wageningen University. 265 p.

Research output: Thesisinternal PhD, WU

Open Access

Towards Sustainable Potato Late Blight Resistance by Cisgenic R Gene Pyramiding

Kwang-Ryong Jo, Zhu, S., Bai, Y., Hutten, R. C. B., Kessel, G. J. T., Vleeshouwers, V. G. A. A., Jacobsen, E., Visser, R. G. F. & Vossen, J. H., 2016, Plant Pathogen Resistance Biotechnology. Collinge, D. B. (ed.). Hoboken, NJ: John Wiley and Sons, p. 171-191

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Citations (Scopus)
2015
22 Citations (Scopus)

Assessing the genetic variation of Ty-1 and Ty-3 alleles conferring resistance to tomato yellow leaf curl virus in a broad tomato germplasm

Caro Rios, C. M., Verlaan, M. G., Julian, O., Finkers, H. J., Wolters, A. M. A., Hutton, S. F., Scott, J. W., Kormelink, R. J. M., Visser, R. G. F., Diez, M. J., Perez-de-Castro, A. & Bai, Y., 2015, In : Molecular Breeding. 35, 13 p., 132.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
21 Citations (Scopus)

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

Wolters, A. M. A., Caro Rios, C. M., Dong, S., Finkers, H. J., Gao, J., Visser, R. G. F., Wang, X., Du, Y. & Bai, Y., 2015, In : Theoretical and Applied Genetics. 128, 10, p. 1987-1997

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Development and analysis of an 20K SNP array for potato (Solanum tuberosum): An insight in the breeding history

Vos, P. G., Uitdewilligen, J. G. A. M. L., Voorrips, R. E., Visser, R. G. F. & van Eck, H. J., 2015, In : Theoretical and Applied Genetics. 128, 12, p. 2387-2401

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
57 Citations (Scopus)

Durable cisgenic resistance to Phytophthora infestans in potato and perspectives for applications in Africa

Gheysen, G., Heremans, B., van Droogenbroeck, B., Custers, R., Vossen, J. H., Visser, R. G. F., Jacobsen, E., Hutten, R. C. B. & Haverkort, A. J., 2015, Potato and sweetpotato in Africa: transforming the value chains for food and nutrition security. Low, J., Nyongesa, M., Quinn, S. & Parker, M. (eds.). Nairobi, Kenya: CABI, p. 122-127 7

Research output: Chapter in Book/Report/Conference proceedingChapter

Elicitin recognition confers enhanced resistance to Phytophthora infestans in potato

Du, J., Verzaux, E. C., Chaparro-Garcia, A., Bijsterbosch, G., Keizer, L. C. P., Zhou, J., Liebrand, T. W. H., Xie, C., Govers, F., Robatzek, S., van der Vossen, E. A. G., Jacobsen, E., Visser, R. G. F., Kamoun, S. & Vleeshouwers, V. G. A. A., 2015, In : Nature Plants. 1, 5 p., 15034.

Research output: Contribution to journalArticleAcademicpeer-review

102 Citations (Scopus)

Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence of synteny in the pericentromeric heterochromatin

de Boer, J. M., Datema, E., Tang, X., Borm, T. J. A., Bakker, E. H., van Eck, H. J., van Ham, R. C. H. J., de Jong, J. H. S. G. M., Visser, R. G. F. & Bachem, C. W. B., 2015, In : BMC Genomics. 16, 374.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

Natural loss-of-function mutation of EDR1 conferring resistance to tomato powdery mildew in Arabidopsis thaliana accession C24

Gao, D., Appiano, M., Huibers, R. P., Loonen, A. E. H. M., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2015, In : Molecular Plant Pathology. 16, 1, p. 71-82

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Profiling of Nutritional and Health-Related Compounds in Oat Varieties

van den Broeck, H. C., Londono Cardona, D. M., Timmer, R. D., Smulders, M. J. M., Gilissen, L. J. W. J. & van der Meer, I. M., 2015, In : Foods. 5, 2, 11 p., nr 2 Communication.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Selection of reference genes for transcriptional analysis of edible tubers of potato (Solanum tuberosum L.)

Mariot, R. F., De Oliveira, L. A., Voorhuijzen, M. M., Staats, M., Hutten, R. C. B., Van Dijk, J. P., Kok, E. & Frazzon, J., 2015, In : PLoS ONE. 10, 4, 13 p., e0120854.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)