Research Output 2011 2019

2019
Open Access
potato
genetic variation
cultivar
canopy
potatoes
2 Citations (Scopus)
Open Access
warts
Warts
Disease Resistance
Pedigree
Solanum tuberosum
2 Citations (Scopus)

Omics analyses of potato plant materials using an improved one-class classification tool to identify aberrant compositional profiles in risk assessment procedures

Kok, E., van Dijk, J., Voorhuijzen, M., Staats, M., Slot, M., Lommen, A., Venema, D., Pla, M., Corujo, M., Barros, E., Hutten, R., Jansen, J. & van der Voet, H., 15 Sep 2019, In : Food Chemistry. 292, p. 350-358

Research output: Contribution to journalArticleAcademicpeer-review

Solanum tuberosum
Risk assessment
risk assessment
potatoes
taxonomy
6 Citations (Scopus)

Tracking disease resistance deployment in potato breeding by enrichment sequencing

Armstrong, M. R., Vossen, J., Lim, T. Y., Hutten, R. C. B., Xu, J., Strachan, S. M., Harrower, B., Champouret, N., Gilroy, E. M. & Hein, I., Feb 2019, In : Plant Biotechnology Journal. 17, 2, p. 540-549

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Disease Resistance
Solanum tuberosum
Breeding
disease resistance
potatoes
2018
19 Citations (Scopus)

A common genetic mechanism underlies morphological diversity in fruits and other plant organs

Wu, S., Zhang, B., Keyhaninejad, N., Rodríguez, G. R., Kim, H. J., Chakrabarti, M., Illa-Berenguer, E., Taitano, N. K., Gonzalo, M. J., Díaz, A., Pan, Y., Leisner, C. P., Halterman, D., Buell, C. R., Weng, Y., Jansky, S. H., van Eck, H., Willemsen, J., Monforte, A. J., Meulia, T. & 1 others, van der Knaap, E., 1 Dec 2018, In : Nature Communications. 9, 1, 4734.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
fruits
Fruits
organs
Fruit
proteins
Open Access
Phytophthora infestans
potatoes
receptors
Phytophthora cactorum
Fragaria
3 Citations (Scopus)

Evidence for selection pressure from resistant potato genotypes but not from fungicide application within a clonal Phytophthora infestans population

Stellingwerf, J. S., Phelan, S., Doohan, F. M., Ortiz, V., Griffin, D., Bourke, A., Hutten, R. C. B., Cooke, D. E. L., Kildea, S. & Mullins, E., Sep 2018, In : Plant Pathology. 67, 7, p. 1528-1538

Research output: Contribution to journalArticleAcademicpeer-review

Phytophthora infestans
Solanum tuberosum
pesticide application
Genotype
potatoes
8 Citations (Scopus)
Open Access
genome assembly
Alternaria solani
Alternaria
Lycopersicon esculentum
Solanum tuberosum
7 Citations (Scopus)

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen

Pais, M., Yoshida, K., Giannakopoulou, A., Pel, M. A., Cano, L. M., Oliva, R. F., Witek, K., Lindqvist-Kreuze, H., Vleeshouwers, V. G. A. A. & Kamoun, S., 5 Jul 2018, In : BMC Evolutionary Biology. 18, 1, 93.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
famine
oxidoreductases
Phytophthora infestans
immunity
potato
2 Citations (Scopus)

QTL mapping in diploid potato by using selfed progenies of the cross S. tuberosum × S. chacoense

Meijer, D., Viquez-Zamora, M., van Eck, H. J., Hutten, R. C. B., Su, Y., Rothengatter, R., Visser, R. G. F., Lindhout, W. H. & van Heusden, A. W., Jul 2018, In : Euphytica. 214, 7, 121.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum tuberosum
Diploidy
quantitative trait loci
diploidy
potatoes
1 Citation (Scopus)

Resistance to tomato yellow leaf curl virus in tomato germplasm

Yan, Z., Pérez-de-Castro, A., Díez, M. J., Hutton, S. F., Visser, R. G. F., Wolters, A-M. A., Bai, Y. & Li, J., 20 Aug 2018, In : Frontiers in Plant Science. 9, 1198.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tomato yellow leaf curl virus
germplasm
tomatoes
leaf curling
screening
11 Citations (Scopus)
Phytophthora infestans
phosphotransferases (kinases)
Phosphotransferases
receptors
Proteins

The identification of allelic variation in potato

Willemsen, J., 2018, Wageningen: Wageningen University. 206 p.

Research output: Thesisinternal PhD, WU

Open Access
haplotypes
potatoes
tetraploidy
tubers
alleles
1 Citation (Scopus)

Two different R gene loci co-evolved with Avr2 of Phytophthora infestans and confer distinct resistance specificities in potato

Aguilera-Galvez, C., Champouret, N., Rietman, H., Lin, X., Wouters, D., Chu, Z., Jones, J. D. G., Vossen, J. H., Visser, R. G. F., Wolters, P. J. & Vleeshouwers, V. G. A. A., 1 Mar 2018, In : Studies in Mycology. 89, p. 105-115

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
vpr Genes
Solanum
Solanum tuberosum
potatoes

Unravelling the elicitin perception pathway against Phytophthora in potato

Domazakis, E., 2018, Wageningen: Wageningen University. 167 p.

Research output: Thesisinternal PhD, WU

Phytophthora
potatoes
receptors
Phytophthora infestans
phosphotransferases (kinases)
Open Access
4 Citations (Scopus)

Discovering novel Alternaria solani succinate dehydrogenase inhibitors by in silico modeling and virtual screening strategies to combat early blight

Iftikhar, S., Shahid, A. A., Halim, S. A., Wolters, P. J., Vleeshouwers, V. G. A. A., Khan, A., Al-Harrasi, A. & Ahmad, S., 17 Nov 2017, In : Frontiers in Chemistry. 5, 100.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Succinate Dehydrogenase
Screening
Fungicides
Disease control
Enzymes
2 Citations (Scopus)

Effectoromics-based identification of cell surface receptors in potato

Domazakis, E., Lin, X., Aguilera-Galvez, C., Wouters, D., Bijsterbosch, G., Wolters, P. J. & Vleeshouwers, V. G. A. A., 2017, Plant Pattern Recognition Receptors: Methods and Protocols. Shan, L. & He, P. (eds.). Humana Press Inc., Vol. 1578. p. 337-353 (Methods in Molecular Biology; vol. 1578).

Research output: Chapter in Book/Report/Conference proceedingChapter

Phytophthora infestans
Cell Surface Receptors
Solanum tuberosum
Breeding
Potexvirus
28 Citations (Scopus)

Evaluation of LD decay and various LD-decay estimators in simulated and SNP-array data of tetraploid potato

Vos, P. G., Paulo, M. J., Voorrips, R. E., Visser, R. G. F., van Eck, H. J. & van Eeuwijk, F. A., 2017, In : Theoretical and Applied Genetics. 130, 1, p. 123-135

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tetraploidy
Linkage Disequilibrium
Solanum tuberosum
linkage disequilibrium
tetraploidy
1 Citation (Scopus)

Functional characterization of a syntaxin involved in tomato (Solanum lycopersicum) resistance against powdery mildew

Bracuto, V., Appiano, M., Zheng, Z., Wolters, A-M. A., Yan, Z., Ricciardi, L., Visser, R. G. F., Pavan, S. & Bai, Y., 20 Sep 2017, In : Frontiers in Plant Science. 8, 10 p., 1573.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum lycopersicum
powdery mildew
tomatoes
Oidium neolycopersici
mildews
8 Citations (Scopus)

Graphical genotyping as a method to map Ny(o,n)sto and Gpa5 using a reference panel of tetraploid potato cultivars

van Eck, H. J., Vos, P. G., Valkonen, J. P. T., Uitdewilligen, J. G. A. M. L., Lensing, H., de Vetten, N. & Visser, R. G. F., 2017, In : Theoretical and Applied Genetics. 130, 3, p. 515-528

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tetraploidy
Solanum tuberosum
genotyping
tetraploidy
potatoes
2 Citations (Scopus)
Open Access
Botrytis cinerea
tomatoes
potatoes
germination
lesions (plant)
2016
4 Citations (Scopus)

Characterization and Transcriptional Profile of Genes Involved in Glycoalkaloid Biosynthesis in New Varieties of Solanum tuberosum L.

Mariot, R. F., De Oliveira, L. A., Voorhuijzen, M. M., Staats, M., Hutten, R. C. B., Van Dijk, J. P., Kok, E. J. & Frazzon, J., 2016, In : Journal of Agricultural and Food Chemistry. 64, 4, p. 988-996

Research output: Contribution to journalArticleAcademicpeer-review

glycoalkaloids
Biosynthesis
new variety
Solanum tuberosum
Genes

Development and application of a 20K SNP array in potato

Vos, P., 2016, Wageningen: Wageningen University. 166 p.

Research output: Thesisinternal PhD, WU

Open Access
linkage disequilibrium
single nucleotide polymorphism
potatoes
deterioration
population structure
14 Citations (Scopus)
Open Access
Phytophthora infestans
Lycopersicon esculentum
Solanum tuberosum
powdery mildew
Arabidopsis
52 Citations (Scopus)
Open Access
Phytophthora
vpr Genes
Phytophthora infestans
Solanum tuberosum
potatoes
14 Citations (Scopus)

Effector-driven marker development and cloning of resistance genes against Phytophthora infestans in potato breeding clone SW93-1015

Lenman, M., Ali, A., Mühlenbock, P., Carlson-Nilsson, U., Liljeroth, E., Champouret, N., Vleeshouwers, V. G. A. A. & Andreasson, E., 2016, In : Theoretical and Applied Genetics. 129, 1, p. 105-115

Research output: Contribution to journalArticleAcademicpeer-review

Phytophthora infestans
Solanum tuberosum
Breeding
Organism Cloning
molecular cloning

ELR interacts with sobir1 to mount defense responses against phytophthora infestans in potato

Domazakis, E., Joosten, M. H. A. J., Wouters, T. C. A. E., Kamoun, S., Visser, R. G. F. & Vleeshouwers, V. G. A. A., 30 Nov 2016, p. 165.

Research output: Contribution to conferenceAbstractAcademic

Open Access
Phytophthora infestans
potatoes
receptors
gene silencing
Solanum microdontum
18 Citations (Scopus)

Genome-wide study of the tomato SlMLO gene family and its functional characterization in response to the powdery mildew fungus oidium neolycopersici

Zheng, Z., Appiano, M., Pavan, S., Bracuto, V., Ricciardi, L., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2016, In : Frontiers in Plant Science. 7, A380.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Oidium neolycopersici
powdery mildew
tomatoes
loci
fungi
7 Citations (Scopus)

Genotypic differences in metabolomic changes during storage induced-degreening of chrysanthemum disk florets

van Geest, G., Choi, Y. H., Arens, P., Post, A., Liu, Y. & van Meeteren, U., 2016, In : Postharvest Biology and Technology. 115, p. 48-59

Research output: Contribution to journalArticleAcademicpeer-review

degreening
Chrysanthemum
Metabolomics
metabolomics
florets

Hevige phytophthora-uitbraak 2016 benadrukt noodzaak resistente rassen

Lammerts Van Bueren, E., Hutten, R. C. B. & Engelen, C. J. M., 2016, In : Aardappelwereld. 2016, 9, p. 32-33

Research output: Contribution to journalArticleProfessional

Open Access
22 Citations (Scopus)

Nine things to know about elicitins

Derevnina, L., Dagdas, Y. F., De la Concepcion, J. C., Bialas, A., Kellner, R., Petre, B., Domazakis, E., Du, J., Wu, C. H., Lin, X., Aguilera-Galvez, C., Cruz-Mireles, N., Vleeshouwers, V. G. A. A. & Kamoun, S., 2016, In : New Phytologist. 212, 4, p. 888-895

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora
Solanum microdontum
Pythium
Oomycetes
Solanum
3 Citations (Scopus)

Plant immunity switched from bacteria to virus

Giannakopoulou, A., Bialas, A., Kamoun, S. & Vleeshouwers, V. G. A. A., 2016, In : Nature Biotechnology. 34, 4, p. 391-392

Research output: Contribution to journalArticleAcademicpeer-review

Plant Immunity
Viruses
Bacteria
135 Citations (Scopus)

Role for migratory wild birds in the global spread of avian influenza H5N8

Lycett, S. J., Bodewes, R., Pohlmann, A., Banks, J., Bányai, K., Boni, M. F., Bouwstra, R. & Lu, L., 14 Oct 2016, In : Science. 354, 6309, p. 213-217

Research output: Contribution to journalArticleAcademicpeer-review

Influenza in Birds
Poultry
Birds
Orthomyxoviridae
Viruses
13 Citations (Scopus)

Silencing of six susceptibility genes results in potato late blight resistance

Sun, K., Wolters, A-M. A., Vossen, J. H., Rouwet, M. E., Loonen, A. E. H. M., Jacobsen, E., Visser, R. G. F. & Bai, Y., 2016, In : Transgenic Research. 25, 5, p. 731-742

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
Solanum tuberosum
vpr Genes
Genes
genes
1 Citation (Scopus)

Solanum venturii, a suitable model system for virus-induced gene silencing studies in potato reveals StMKK6 as an important player in plant immunity

Dobnik, D., Lazar, A., Stare, T., Gruden, K., Vleeshouwers, V. G. A. A. & Žel, J., 2016, In : Plant Methods. 12, 1, 29.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum venturii
Plant Immunity
Solanum
Gene Silencing
gene silencing

Susceptibility pays off: insights into the mlo-based powdery mildew resistance

Appiano, M., 2016, Wageningen: Wageningen University. 265 p.

Research output: Thesisinternal PhD, WU

Open Access
powdery mildew
tomatoes
loci
Oidium neolycopersici
cucumbers
3 Citations (Scopus)

Towards Sustainable Potato Late Blight Resistance by Cisgenic R Gene Pyramiding

Kwang-Ryong Jo, Zhu, S., Bai, Y., Hutten, R. C. B., Kessel, G. J. T., Vleeshouwers, V. G. A. A., Jacobsen, E., Visser, R. G. F. & Vossen, J. H., 2016, Plant Pathogen Resistance Biotechnology. Collinge, D. B. (ed.). Hoboken, NJ: John Wiley and Sons, p. 171-191

Research output: Chapter in Book/Report/Conference proceedingChapter

Phytophthora infestans
potatoes
genetic engineering
breeding
genes
2015
19 Citations (Scopus)
Phytophthora infestans
vpr Genes
Solanum tuberosum
Virulence
virulence
16 Citations (Scopus)

Assessing the genetic variation of Ty-1 and Ty-3 alleles conferring resistance to tomato yellow leaf curl virus in a broad tomato germplasm

Caro Rios, C. M., Verlaan, M. G., Julian, O., Finkers, H. J., Wolters, A. M. A., Hutton, S. F., Scott, J. W., Kormelink, R. J. M., Visser, R. G. F., Diez, M. J., Perez-de-Castro, A. & Bai, Y., 2015, In : Molecular Breeding. 35, 13 p., 132.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tomato yellow leaf curl virus
Solanum chilense
Lycopersicon esculentum
germplasm
Alleles
4 Citations (Scopus)

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

Wolters, A. M. A., Caro Rios, C. M., Dong, S., Finkers, H. J., Gao, J., Visser, R. G. F., Wang, X., Du, Y. & Bai, Y., 2015, In : Theoretical and Applied Genetics. 128, 10, p. 1987-1997

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
genome assembly
Solanum lycopersicum
Lycopersicon esculentum
introgression
Organism Cloning
48 Citations (Scopus)

Development and analysis of an 20K SNP array for potato (Solanum tuberosum): An insight in the breeding history

Vos, P. G., Uitdewilligen, J. G. A. M. L., Voorrips, R. E., Visser, R. G. F. & van Eck, H. J., 2015, In : Theoretical and Applied Genetics. 128, 12, p. 2387-2401

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum tuberosum
Breeding
Single Nucleotide Polymorphism
potatoes
history

Durable cisgenic resistance to Phytophthora infestans in potato and perspectives for applications in Africa

Gheysen, G., Heremans, B., van Droogenbroeck, B., Custers, R., Vossen, J. H., Visser, R. G. F., Jacobsen, E., Hutten, R. C. B. & Haverkort, A. J., 2015, Potato and sweetpotato in Africa: transforming the value chains for food and nutrition security. Low, J., Nyongesa, M., Quinn, S. & Parker, M. (eds.). Nairobi, Kenya: CABI, p. 122-127 7

Research output: Chapter in Book/Report/Conference proceedingChapter

Phytophthora infestans
potatoes
genes
clones
cultivars
80 Citations (Scopus)

Elicitin recognition confers enhanced resistance to Phytophthora infestans in potato

Du, J., Verzaux, E. C., Chaparro-Garcia, A., Bijsterbosch, G., Keizer, L. C. P., Zhou, J., Liebrand, T. W. H., Xie, C., Govers, F., Robatzek, S., van der Vossen, E. A. G., Jacobsen, E., Visser, R. G. F., Kamoun, S. & Vleeshouwers, V. G. A. A., 2015, In : Nature Plants. 1, 5 p., 15034.

Research output: Contribution to journalArticleAcademicpeer-review

Phytophthora infestans
potatoes
pathogens
receptors
Solanum microdontum
5 Citations (Scopus)

Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence of synteny in the pericentromeric heterochromatin

de Boer, J. M., Datema, E., Tang, X., Borm, T. J. A., Bakker, E. H., van Eck, H. J., van Ham, R. C. H. J., de Jong, J. H. S. G. M., Visser, R. G. F. & Bachem, C. W. B., 2015, In : BMC Genomics. 16, 374.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Euchromatin
Synteny
Chromosomes, Human, Pair 5
Heterochromatin
Solanum tuberosum
5 Citations (Scopus)

Natural loss-of-function mutation of EDR1 conferring resistance to tomato powdery mildew in Arabidopsis thaliana accession C24

Gao, D., Appiano, M., Huibers, R. P., Loonen, A. E. H. M., Visser, R. G. F., Wolters, A. M. A. & Bai, Y., 2015, In : Molecular Plant Pathology. 16, 1, p. 71-82

Research output: Contribution to journalArticleAcademicpeer-review

Disease Resistance
disease resistance
Lycopersicon esculentum
powdery mildew
Arabidopsis

Profiling of Nutritional and Health-Related Compounds in Oat Varieties

van den Broeck, H. C., Londono Cardona, D. M., Timmer, R. D., Smulders, M. J. M., Gilissen, L. J. W. J. & van der Meer, I. M., 2015, In : Foods. 5, 2, 11 p., nr 2 Communication.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
oats
Glucans
Health
glucans
health
12 Citations (Scopus)

Selection of reference genes for transcriptional analysis of edible tubers of potato (Solanum tuberosum L.)

Mariot, R. F., De Oliveira, L. A., Voorhuijzen, M. M., Staats, M., Hutten, R. C. B., Van Dijk, J. P., Kok, E. & Frazzon, J., 2015, In : PLoS ONE. 10, 4, 13 p., e0120854.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Solanum tuberosum
tubers
Genes
potatoes
genes