Datasets
- 1 - 25 out of 120 results
- Start date (descending)
Transcriptomics datasets for Clostridium autoethanogenum grown on CO in different environmental conditions
Diender, M. (Creator), Koehorst, J. (Creator), Machado de Sousa, D. (Creator), Wageningen University & Research, 25 Jan 2019
DOI: 10.4121/uuid:b6bd64a9-5bdb-4655-9829-520aa4600987
Dataset
Thermus thermophilus HB27 WT vs HB27Δago RNAseq
Swarts, D. (Creator), Westra, E. (Creator), van der Oost, J. (Creator), Wageningen UR, 17 Feb 2014
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52738
Dataset
Genome sequence of Propionibacterium australiense
Vaidya, J. D. (Creator), Hornung, B. V. H. (Creator), Smidt, H. (Creator), Edwards, J. (Creator), Plugge, C. (Creator), Wageningen University, 5 Sep 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB19534
Dataset
Comparative genomic and physiological analysis of Trichococcus species
Strepis, N. (Creator), Sanchez Andrea, I. (Creator), van Gelder, T. (Creator), van Kruistum, H. (Creator), Shapiro, N. (Creator), Kyrpides, N. (Creator), Göker, M. (Creator), Klenk, H. P. (Creator), Schaap, P. (Creator), Stams, F. (Creator), Machado de Sousa, D. (Creator), Wageningen University, 10 Apr 2016
https://www.ebi.ac.uk/ena/data/view/PRJEB12708
Dataset
T. pasteurii comparison with proteomics with C. butyricum
Strepis, N. (Creator), Wageningen University & Research, 5 Oct 2018
DOI: 10.18174/461383
Dataset
Guam Sponge Microbial OTU abundance & Taxonomy (Greengenes)
Steinert, G. (Creator), Taylor, M. W. (Creator), Deines, P. (Creator), Simister, R. L. (Creator), De Voogd, N. J. (Creator), Hoggard, M. (Creator), Schupp, P. J. (Creator), Wageningen University & Research, 2016
https://figshare.com/articles/Guam_Sponge_Microbial_OTU_abundance_Taxonomy_Greengenes_/2063280
Dataset
Effects of Argonaute on gene expression in Thermus thermophilus
Swarts, D. (Creator), Koehorst, J. (Creator), Westra, E. R. (Creator), Schaap, P. (Creator), van der Oost, J. (Creator), Wageningen University, 23 Apr 2015
https://www.ebi.ac.uk/ena/data/view/PRJEB8709
Dataset
Genome sequencing and description of Lucifera butyrica gen. nov. sp. nov., an novel glycerol fermenter and sulfur respirer isolated from acid rock drainage
Sanchez Andrea, I. (Creator), Florentino de Souza Silva, A. (Creator), Semerel, J. (Creator), Strepis, N. (Creator), Machado de Sousa, D. (Creator), Stams, F. (Creator), Wageningen University, 29 Sep 2016
https://www.ebi.ac.uk/ena/data/view/PRJEB13757
Dataset
Genome sequence of Propionibacterium JV5
Vaidya, J. D. (Creator), Hornung, B. V. H. (Creator), Smidt, H. (Creator), Edwards, J. (Creator), Plugge, C. (Creator), Wageningen University, 11 Aug 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB19533
Dataset
Molecular analysis of sponge-associated fungi
Mohamad, M. A. N. (Creator), Smidt, H. (Creator), Sipkema, D. (Creator), Wageningen University, 31 Mar 2013
https://www.ebi.ac.uk/ena/data/view/PRJEB1704
Dataset
Supplementary data : Peng, K, Van Oers, M.M., Hu, Z., Van Lent, J.W.M. and Vlak, J.M. (2010), Baculovirus Per Os Infectivity Factors Form a Complex on the Surface of Occlusion-Derived Virus. Journal of Virology, 84: 9497-9504. doi: 10.1128/JVI.00812-10
Peng, K. (Creator), van Oers, M. (Creator), Hu, Z. (Creator), van Lent, J. (Creator), Vlak, J. (Creator), Wageningen UR, 19 Jul 2010
Dataset
Sequencing the bacterial metatranscriptome associated with the marine sponge Crambe crambe
Versluis, D. (Creator), D'Andrea, M. M. (Creator), Ramiro Garcia, J. (Creator), Leimena, M. M. (Creator), Hugenholtz, F. (Creator), Zhang, J. (Creator), Ozturk, B. (Creator), Nylund, L. (Creator), Sipkema, D. (Creator), van Schaik, W. (Creator), de Vos, W. (Creator), Kleerebezem, M. (Creator), Smidt, H. (Creator), van Passel, M. W. J. (Creator), Wageningen University, 7 Dec 2015
https://www.ebi.ac.uk/ena/data/view/PRJEB7474
Dataset
Gender and strain dependent differences in intestinal immunology correlate with differences in microbiota composition (colon)
Elderman, M. (Creator), Hugenholtz, F. (Creator), Belzer, C. (Creator), Boekschoten, M. (Creator), van Beek, A. A. (Creator), de Haan, B. J. (Creator), Savelkoul, H. (Creator), de Vos, P. (Creator), Faas, M. M. (Creator), Wageningen University, 27 Jun 2018
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE85911
Dataset
Transcription profiling of Aspergillus niger grown in media containg different pectic substrates to study the pectinolytic system
Martens-Uzunova, E. S. (Creator), Wageningen UR, 13 Jun 2008
https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1626/
Dataset
Complete genome sequence of the Akkermansia glycaniphila strain PytT a mucin-degrading specialist of the reticulated python gut
Ouwerkerk, J. P. (Creator), Koehorst, J. (Creator), Schaap, P. (Creator), Ritari, J. (Creator), Paulin, L. (Creator), Belzer, C. (Creator), de Vos, W. (Creator), Wageningen University, 2 Sep 2016
https://www.ebi.ac.uk/ena/data/view/PRJEB15121
Dataset
Fat, fibre and cancer risk in African Americans and rural Africans
O'Keefe, S. J. (Creator), Li, J. V. (Creator), Lahti, L. (Creator), Ou, J. (Creator), Carbonero, F. (Creator), Khaled, M. (Creator), Postma, J. M. (Creator), Kinross, J. (Creator), Wahl, E. (Creator), Ruder, E. (Creator), Vipperla, K. (Creator), Naidoo, V. (Creator), Mtshali, L. (Creator), Tims, S. (Creator), Puylaert, P. (Creator), DeLany, J. (Creator), Krasinskas, A. (Creator), Benefiel, A. C. (Creator), Kaseb, H. O. (Creator), Newton, K. (Creator), Nicholson, J. K. (Creator), De Vos, W. M. (Creator), Gaskins, H. R. (Creator), Zoetendal, E. (Creator), Wageningen UR, 2015
DOI: 10.5061/dryad.1mn1n
Dataset
Specific modulation of mucosal immune response, tolerance and proliferation in mice colonized with A. muciniphila
Derrien, M. M. N. (Creator), van Baarlen, P. (Creator), Hooiveld, G. (Creator), Norin, E. (Creator), Muller, M. (Creator), de Vos, W. (Creator), Wageningen University, 21 Sep 2011
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE18587
Dataset
Aging-induced decline in mucus thickness in mice is associated with changes in microbiota composition and immunity and is sex dependent
Elderman, M. (Creator), Sovran, B. (Creator), Hugenholtz, F. (Creator), Graversen, K. (Creator), Huijskes, M. (Creator), Houtsma, E. (Creator), Belzer, C. (Creator), Boekschoten, M. (Creator), de Vos, P. (Creator), Dekker, J. (Creator), Wells, J. (Creator), Faas, M. M. (Creator), Wageningen University, 28 Aug 2017
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94515
Dataset
16S rRNA (gene) based barcoded Illumina sequencing of the microbiota in ileal and colonic luminal content of Ercc1-/Δ7 mice after 10 weeks of Akkermansia muciniphila supplementation
van der Lugt, B. (Creator), van Beek, A. A. (Creator), Aalvink, S. (Creator), Meijer, B. (Creator), Sovran, B. (Creator), Vermeij, W. P. (Creator), Brandt, R. M. C. (Creator), de Vos, W. (Creator), Savelkoul, H. (Creator), Steegenga, W. (Creator), Belzer, C. (Creator), Wageningen University, 5 Mar 2019
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA525606
Dataset
Genome assembly of a novel psychrotolerance bacterium, Trichococcus ART1 .
Parshina, S. (Creator), Strepis, N. (Creator), Aalvink, S. (Creator), Nozhevnikova, A. N. (Creator), Stams, F. (Creator), Machado de Sousa, D. (Creator), Wageningen University, 13 Jun 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB26366
Dataset
Aspergillus niger N402 derivatives grown with different supplements
Odoni, D. I. (Creator), Vazquez Vilar, M. (Creator), van Gaal, M. (Creator), Schonewille, T. (Creator), Martins dos Santos, V. (Creator), Tamayo-Ramos, J. A. (Creator), Suarez Diez, M. (Creator), Schaap, P. (Creator), Wageningen University, Laboratory of systems and synthetic biology, 29 Jun 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB24704
Dataset
Nutritional impact of a novel iron-containing protein meal on gastrointestinal tract functioning in larval zebrafish Danio rerio: characterisation of microbial communities and mRNAseq gene expression analysis
Rurangwa, E. (Creator), Sipkema, D. (Creator), Kals, J. (Creator), ter Veld, M. (Creator), Forlenza, M. (Creator), Bacanu, M. G. (Creator), Smidt, H. (Creator), Palstra, A. (Creator), Wageningen University, 16 Dec 2013
https://www.ebi.ac.uk/ena/data/view/PRJEB4784
Dataset
Genome sequence of Romboutsia lituseburensis
Gerritsen, J. (Creator), Umanetc, A. (Creator), van Leeuwen-Staneva, I. N. (Creator), Hornung, B. V. H. (Creator), Ritari, J. (Creator), Paulin, L. (Creator), Rijkers, G. T. (Creator), de Vos, W. (Creator), Smidt, H. (Creator), Wageningen University, 4 Aug 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB7306
Dataset
Do apes smell like humans? The role of skin bacteria and volatiles of primates in mosquito host selection
Verhulst, N. (Creator), Umanetc, A. (Creator), Weldegergis, B. (Creator), Maas, J. P. A. (Creator), Visser, T. (Creator), Dicke, M. (Creator), Smidt, H. (Creator), Takken, W. (Creator), Wageningen University, 8 Nov 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB28608
Dataset
The colonization dynamics of the gut microbiota in tilapia larvae
Giatsis, C. (Creator), Sipkema, D. (Creator), Smidt, H. (Creator), Verreth, J. (Creator), Verdegem, M. (Creator), Wageningen University, 31 Aug 2013
https://www.ebi.ac.uk/ena/data/view/PRJEB4462
Dataset