Research Output 1939 2020

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2020

A lysin motif effector subverts chitin-triggered immunity to facilitate arbuscular mycorrhizal symbiosis

Zeng, T., Rodriguez-Moreno, L., Mansurkhodzaev, A., Wang, P., van den Berg, W., Gasciolli, V., Cottaz, S., Fort, S., Thomma, B. P. H. J., Bono, J. J., Bisseling, T. & Limpens, E., Jan 2020, In : New Phytologist. 225, 1, p. 448-460

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Chitin
Symbiosis
chitin
symbiosis
Immunity

G protein α subunit suppresses sporangium formation through a serine/threonine protein kinase in Phytophthora sojae

Qiu, M., Li, Y., Zhang, X., Xuan, M., Zhang, B., Ye, W., Zheng, X., Govers, F. & Wang, Y., 21 Jan 2020, In : PLoS Pathogens. 16, 1, e1008138.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Sporangia
Phytophthora
Protein-Serine-Threonine Kinases
Protein Subunits
GTP-Binding Proteins
Open Access
pome fruits
postharvest diseases
epidemiology
pathogens
control methods

Time-gated confocal microscopy reveals accumulation of exocyst subunits at the plant-pathogen interface

Overdijk, E. J. R., Tang, H., Borst, J. W., Govers, F. & Ketelaar, T., 23 Jan 2020, In : Journal of Experimental Botany. 71, 3, p. 837-849 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Confocal Microscopy
plant pathogens
exocytosis
Exocytosis
Infection

“CATAStrophy,” a Genome-Informed Trophic Classification of Filamentous Plant Pathogens – How Many Different Types of Filamentous Plant Pathogens Are There?

Hane, J. K., Paxman, J., Jones, D. A. B., Oliver, R. P. & de Wit, P., 21 Jan 2020, In : Frontiers in Microbiology. 10, 3088.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genome
Carbohydrates
Enzymes
Oomycetes
Genes
2019

A conserved GH17 glycosyl hydrolase from plant pathogenic Dothideomycetes releases a DAMP causing cell death in tomato

Ökmen, B., Bachmann, D. & de Wit, P. J. G. M., Dec 2019, In : Molecular Plant Pathology. 20, 12, p. 1710-1721

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Dothideomycetes
glycosidases
Hydrolases
Lycopersicon esculentum
cell death
1 Citation (Scopus)

Activity and phylogenetics of the broadly occurring family of microbial nep1-like proteins

Seidl, M. F. & Van Den Ackerveken, G., 25 Aug 2019, In : Annual Review of Phytopathology. 57, p. 367-386 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

phylogeny
Oomycetes
proteins
sphingolipids
ceramides
Open Access
Panama
Musa
bananas
genotyping
assays

An EFR-Cf-9 chimera confers enhanced resistance to bacterial pathogens by SOBIR1- and BAK1-dependent recognition of elf18

Wu, J., Reca, I. B., Spinelli, F., Lironi, D., De Lorenzo, G., Poltronieri, P., Cervone, F., Joosten, M. H. A. J., Ferrari, S. & Brutus, A., 1 Jun 2019, In : Molecular Plant Pathology. 20, 6, p. 751-764 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Peptide Elongation Factor Tu
chimera
chimerism
pattern recognition
pathogen
2 Citations (Scopus)

An Improved Phenotyping Protocol for Panama Disease in Banana

García-Bastidas, F. A., Van der Veen, A. J. T., Nakasato-Tagami, G., Meijer, H. J. G., Arango-Isaza, R. E. & Kema, G. H. J., 6 Aug 2019, In : Frontiers in Plant Science. 10, 1006.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Panama
bananas
phenotype
Fusarium
inoculum

Chitin-Binding Protein of Verticillium nonalfalfae Disguises Fungus from Plant Chitinases and Suppresses Chitin-Triggered Host Immunity

Volk, H., Marton, K., Flajšman, M., Radišek, S., Tian, H., Hein, I., Podlipnik, Č., Thomma, B. P. H. J., Košmelj, K., Javornik, B. & Berne, S., Oct 2019, In : Molecular Plant-Microbe Interactions. 32, 10, p. 1378-1390

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Verticillium
Chitinases
Chitin
chitinase
chitin

Chromatin-dependent regulation of secondary metabolite biosynthesis in fungi: is the picture complete?

Collemare, J. & Seidl, M. F., Nov 2019, In : FEMS Microbiology Reviews. 43, 6, p. 591-607

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Multigene Family
Chromatin
Fungi
Histones
DNA
1 Citation (Scopus)

Clade 5 aspartic proteases of Phytophthora infestans are virulence factors implied in RXLR effector cleavage

Schoina, C., Verbeek-de Kruif, N., Govers, F. & Bouwmeester, K., May 2019, In : European Journal of Plant Pathology. 154, 1, p. 17-29

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
aspartic proteinases
Phytophthora infestans
virulence
plasmepsin
Plasmodium falciparum
16 Citations (Scopus)

CLE9 peptide-induced stomatal closure is mediated by abscisic acid, hydrogen peroxide, and nitric oxide in Arabidopsis thaliana

Zhang, L., Shi, X., Zhang, Y., Wang, J., Yang, J., Ishida, T., Jiang, W., Han, X., Kang, J., Wang, X., Pan, L., Lv, S., Cao, B., Zhang, Y., Wu, J., Han, H., Hu, Z., Cui, L., Sawa, S., He, J. & 1 others, Wang, G., Mar 2019, In : Plant Cell and Environment. 42, 3, p. 1033-1044

Research output: Contribution to journalArticleAcademicpeer-review

Abscisic Acid
Arabidopsis
Hydrogen Peroxide
nitric oxide
hydrogen peroxide
1 Citation (Scopus)

Colletotrichum species associated with anthracnose of Pyrus spp. in China

Fu, M., Crous, P. W., Bai, Q., Zhang, P. F., Xiang, J., Guo, Y. S., Zhao, F. F., Yang, M. M., Hong, N., Xu, W. X. & Wang, G. P., 1 Jul 2019, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 42, p. 1-35 35 p.

Research output: Contribution to journalArticleAcademicpeer-review

anthracnose
Pyrus
Colletotrichum
pears
Fiorinia
2 Citations (Scopus)

Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

Valero-Jiménez, C. A., Veloso, J., Staats, M. & van Kan, J. A. L., 12 Mar 2019, In : BMC Genomics. 20, 1, 203.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Botrytis
Host Specificity
Genomics
Proteins
Fungi
6 Citations (Scopus)

Comparing Arabidopsis receptor kinase and receptor protein-mediated immune signaling reveals BIK1-dependent differences

Wan, W. L., Zhang, L., Pruitt, R., Zaidem, M., Brugman, R., Ma, X., Krol, E., Perraki, A., Kilian, J., Grossmann, G., Stahl, M., Shan, L., Zipfel, C., van Kan, J. A. L., Hedrich, R., Weigel, D., Gust, A. A. & Nürnberger, T., Mar 2019, In : New Phytologist. 221, 4, p. 2080-2095

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Arabidopsis
Protein Kinases
phosphotransferases (kinases)
Phosphotransferases
Pattern Recognition Receptors
1 Citation (Scopus)

Dynamic virulence-related regions of the plant pathogenic fungus Verticillium dahliae display enhanced sequence conservation

Depotter, J. R. L., Shi-Kunne, X., Missonnier, H., Liu, T., Faino, L., van den Berg, G. C. M., Wood, T. A., Zhang, B., Jacques, A., Seidl, M. F. & Thomma, B. P. H. J., Aug 2019, In : Molecular Ecology. 28, 15, p. 3482-3495 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Verticillium
Verticillium dahliae
plant pathogenic fungi
virulence
Virulence
4 Citations (Scopus)

Exocyst subunit Sec6 is positioned by microtubule overlaps in the moss phragmoplast prior to cell plate membrane arrival

Tang, H., de Keijzer, J., Overdijk, E. J. R., Sweep, E., Steentjes, M., Vermeer, J. E. M., Janson, M. E. & Ketelaar, T., 11 Feb 2019, In : Journal of Cell Science. 132, 3

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bryophyta
Microtubules
Cell Membrane
Cytokinesis
Munc18 Proteins
2 Citations (Scopus)

Gene cluster conservation identifies melanin and perylenequinone biosynthesis pathways in multiple plant pathogenic fungi

Ebert, M. K., Spanner, R. E., de Jonge, R., Smith, D. J., Holthusen, J., Secor, G. A., Thomma, B. P. H. J. & Bolton, M. D., Mar 2019, In : Environmental Microbiology. 21, 3, p. 913-927

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
melanin
Melanins
plant pathogenic fungi
Multigene Family
multigene family
19 Citations (Scopus)

Genera of phytopathogenic fungi: GOPHY 2

Marin-Felix, Y., Hernández-Restrepo, M., Wingfield, M. J., Akulov, A., Carnegie, A. J., Cheewangkoon, R., Gramaje, D., Groenewald, J. Z., Guarnaccia, V., Halleen, F., Lombard, L., Luangsa-ard, J., Marincowitz, S., Moslemi, A., Mostert, L., Quaedvlieg, W., Schumacher, R. K., Spies, C. F. J., Thangavel, R., Taylor, P. W. J. & 4 others, Wilson, A. M., Wingfield, B. D., Wood, A. R. & Crous, P. W., 1 Mar 2019, In : Studies in Mycology. 92, p. 47-133

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant pathogenic fungi
Fungi
Oculimacula
Stenocarpella
Gaeumannomyces
4 Citations (Scopus)

Genera of phytopathogenic fungi: GOPHY 3

Marin-Felix, Y., Hernández-Restrepo, M., Iturrieta-González, I., García, D., Gené, J., Groenewald, J. Z., Cai, L., Chen, Q., Quaedvlieg, W., Schumacher, R. K., Taylor, P. W. J., Ambers, C., Bonthond, G., Edwards, J., Krueger-Hadfield, S. A., Luangsa-ard, J. J., Morton, L., Moslemi, A., Sandoval-Denis, M., Tan, Y. P. & 4 others, Thangavel, R., Vaghefi, N., Cheewangkoon, R. & Crous, P. W., 1 Sep 2019, In : Studies in Mycology. 94, p. 1-124 124 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant pathogenic fungi
Fungi
Names
Seiridium
Ramichloridium
3 Citations (Scopus)

Grey mould of strawberry, a devastating disease caused by the ubiquitous necrotrophic fungal pathogen Botrytis cinerea

Petrasch, S., Knapp, S. J., van Kan, J. A. L. & Blanco-Ulate, B., 4 Apr 2019, In : Molecular Plant Pathology. 20, 6, p. 877-892

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Botrytis
Fragaria
Botrytis cinerea
strawberries
Fungi
Open Access
Pyrus communis
Alternaria
pears
control methods
Netherlands

In silico prediction and characterisation of secondary metabolite clusters in the plant pathogenic fungus Verticillium dahliae

Shi-Kunne, X., de Pedro Jové, R., Depotter, J. R. L., Ebert, M. K., Seidl, M. F. & Thomma, B. P. H. J., 20 Apr 2019, In : FEMS Microbiology Letters. 366, 7, fnz081.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Verticillium
Computer Simulation
Fungi
Multigene Family
Siderophores
4 Citations (Scopus)

Involvement of sweet pepper CaLOX2 in jasmonate-dependent induced defence against Western flower thrips

Sarde, S. J., Bouwmeester, K., Venegas-Molina, J., David, A., Boland, W. & Dicke, M., Oct 2019, In : Journal of Integrative Plant Biology. 61, 10, p. 1085-1098

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Thysanoptera
Capsicum
Frankliniella occidentalis
sweet peppers
jasmonic acid

Johanna Westerdijk (1881–1961) – the impact of the grand lady of phytopathology in the Netherlands from 1917 to 2017

Boonekamp, P. M., Pieterse, C. M. J., Govers, F. & Cornelissen, B. J. C., May 2019, In : European Journal of Plant Pathology. 154, 1, p. 11-16

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant pathology
Netherlands
4 Citations (Scopus)

Kinase activity of SOBIR1 and BAK1 is required for immune signalling

Van Der Burgh, A. M., Postma, J., Robatzek, S. & Joosten, M. H. A. J., Mar 2019, In : Molecular Plant Pathology. 20, 3, p. 410-422

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
phosphotransferases (kinases)
Phosphotransferases
Leucine
receptors
protein
44 Citations (Scopus)

Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation

Vu, D., Groenewald, M., de Vries, M., Gehrmann, T., Stielow, B., Eberhardt, U., Al-Hatmi, A., Groenewald, J. Z., Cardinali, G., Houbraken, J., Boekhout, T., Crous, P. W., Robert, V. & Verkley, G. J. M., Mar 2019, In : Studies in Mycology. 92, p. 135-154 20 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fungal DNA
DNA barcoding
Genetic Markers
barcoding
Fungi
8 Citations (Scopus)

Long-read annotation: Automated eukaryotic genome annotation based on long-read cDNA sequencing

Cook, D. E., Valle-Inclan, J. E., Pajoro, A., Rovenich, H., Thomma, B. P. H. J. & Faino, L., 1 Jan 2019, In : Plant Physiology. 179, 1, p. 38-54 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
complementary DNA
DNA Sequence Analysis
sequence analysis
Complementary DNA
Genome
1 Citation (Scopus)

Measuring the impact of Verticillium longisporum on oilseed rape (Brassica napus) yield in field trials in the United Kingdom

Depotter, J. R. L., Thomma, B. P. H. J. & Wood, T. A., Jan 2019, In : European Journal of Plant Pathology. 153, 1, p. 321–326

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Verticillium longisporum
Verticillium
Brassica napus
signs and symptoms (plants)
United Kingdom

Metabolic Model of the Phytophthora infestans-Tomato Interaction Reveals Metabolic Switches during Host Colonization

Rodenburg, S. Y. A., Seidl, M. F., Judelson, H. S., Vu, A. L., Govers, F. & de Ridder, D., 9 Jul 2019, In : mBio. 10, 4, e00454-19.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
Lycopersicon esculentum
Infection
Oomycetes
Thiamine

New species of Septoria associated with leaf spot diseases in Iran

Bakhshi, M., Arzanlou, M., Zare, R., Groenewald, J. Z. & Crous, P. W., 8 Nov 2019, In : Mycologia. 111, 6, p. 1056-1071

Research output: Contribution to journalArticleAcademicpeer-review

leaf spot
Septoria
Iran
rRNA Genes
Salicaceae
6 Citations (Scopus)

Parastagonosporella fallopiae gen. et sp. nov. (Phaeosphaeriaceae) on Fallopia convolvulus from Iran

Bakhshi, M., Arzanlou, M., Groenewald, J. Z., Quaedvlieg, W. & Crous, P. W., Feb 2019, In : Mycological Progress. 18, 1-2, p. 203–214

Research output: Contribution to journalArticleAcademicpeer-review

Phaeosphaeriaceae
Convolvulus
Fallopia convolvulus
Iran
new species

Pfcyp51 exclusively determines reduced sensitivity to 14α-demethylase inhibitor fungicides in the banana black Sigatoka pathogen Pseudocercospora fijiensis

Chong, P., Vichou, A. E., Schouten, H. J., Meijer, H. J. G., Arango Isaza, R. E. & Kema, G. H. J., 17 Oct 2019, In : PLoS ONE. 14, 10, e0223858.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
black Sigatoka
Mycosphaerella fijiensis
Fungicides
Musa
Pathogens
17 Citations (Scopus)

Phylogeny and genetic diversity of the banana Fusarium wilt pathogen Fusarium oxysporum f. sp. cubense in the Indonesian centre of origin

Maryani, N., Lombard, L., Poerba, Y. S., Subandiyah, S., Crous, P. W. & Kema, G. H. J., 1 Mar 2019, In : Studies in Mycology. 92, p. 155-194

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fusarium oxysporum f. sp. cubense
center of origin
Musa
Fusarium wilt
Fusarium
1 Citation (Scopus)

Phytophthora infestans small phospholipase D-like proteins elicit plant cell death and promote virulence

Meijer, H. J. G., Schoina, C., Wang, S., Bouwmeester, K., Hua, C. & Govers, F., Feb 2019, In : Molecular Plant Pathology. 20, 2, p. 180-193

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
Phospholipase D
phospholipase D
Plant Cells
plant proteins
4 Citations (Scopus)

Plant Immunity: Thinking Outside and Inside the Box

van der Burgh, A. M. & Joosten, M. H. A. J., 1 Jul 2019, In : Trends in Plant Science. 24, 7, p. 587-601 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

immunity
immune response
plant architecture
coevolution
hands
2 Citations (Scopus)

Re-evaluation of Mycoleptodiscus species and morphologically similar fungi

Hernández-Restrepo, M., Bezerra, J. D. P., Tan, Y. P., Wiederhold, N., Crous, P. W., Guarro, J. & Gené, J., 1 Jul 2019, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 42, p. 205-227 23 p.

Research output: Contribution to journalArticleAcademicpeer-review

fungus
phylogenetics
fungi
leaf spot
new species
4 Citations (Scopus)

Small RNA molecules and their role in plant disease

Rose, L. E., Overdijk, E. J. R. & van Damme, M., Jan 2019, In : European Journal of Plant Pathology. 153, 1, p. 1-14

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant diseases and disorders
RNA
RNA interference
pathogens
gene expression
3 Citations (Scopus)

Spatio-temporal patterns of genetic variation in Arbacia lixula, a thermophilous sea urchin in expansion in the Mediterranean

Pérez-Portela, R., Wangensteen, O. S., Garcia-Cisneros, A., Valero-Jiménez, C., Palacín, C. & Turon, X., 2019, In : Heredity. 122, 2, p. 244-259

Research output: Contribution to journalArticleAcademicpeer-review

Arbacia
Sea Urchins
Mediterranean Sea
Gene Flow
Genetic Structures
7 Citations (Scopus)

Sporocadaceae, a family of coelomycetous fungi with appendage-bearing conidia

Liu, F., Bonthond, G., Groenewald, J. Z., Cai, L. & Crous, P. W., 1 Mar 2019, In : Studies in Mycology. 92, p. 287-415

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Monochaetia
Fungal Spores
Truncatella
aprepitant
appendages
21 Citations (Scopus)

The Colletotrichum dracaenophilum, C. magnum and C. orchidearum species complexes

Damm, U., Sato, T., Alizadeh, A., Groenewald, J. Z. & Crous, P. W., 1 Mar 2019, In : Studies in Mycology. 92, p. 1-46

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Colletotrichum
Glomerella
Glycine
taxonomy
Phyllachorales
3 Citations (Scopus)

The Genome of the Fungal Pathogen Verticillium dahliae Reveals Extensive Bacterial to Fungal Gene Transfer

Shi-Kunne, X., van Kooten, M., Depotter, J. R. L., Thomma, B. P. H. J. & Seidl, M. F., Mar 2019, In : Genome Biology and Evolution. 11, 3, p. 855-868

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fungal Genome
Fungal Genes
Verticillium
Horizontal Gene Transfer
Verticillium dahliae

Tomato inoculation with a non-pathogenic strain of Fusarium oxysporum enhances pest control by changing the feeding preference of an omnivorous predator

Eschweiler, J., van Holstein-Saj, R., Marjolein Kruidhof, H., Schouten, A. & Messelink, G. J., 6 Jun 2019, In : Frontiers in Ecology and Evolution. 7, JUN, 213.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
avirulent strains
endophyte
feeding preferences
pest control
Fusarium oxysporum

Transcriptome and proteome analyses of proteases in biotroph fungal pathogen Cladosporium fulvum

Karimi Jashni, M., van der Burgt, A., Battaglia, E., Mehrabi, R., Collemare, J. & de Wit, P. J. G. M., 5 Nov 2019, In : Journal of Plant Pathology. 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Passalora fulva
proteome
transcriptome
proteinases
pathogens

Variable genome evolution in fungi after transposon-mediated amplification of a housekeeping gene

Dhillon, B., Kema, G. H. J., Hamelin, R. C., Bluhm, B. H. & Goodwin, S. B., 27 Aug 2019, In : Mobile DNA. 10, 1, 37.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Essential Genes
Point Mutation
DNA Transposable Elements
Fungi
Genome

Veertig jaar onderzoek aan de bladvlekkenziekte van tomaat

de Wit, P. J. G. M., Oct 2019, In : Gewasbescherming. 50, 5, p. 173-182

Research output: Contribution to journalArticleProfessional

Open Access

Zonder strijd geen overwinning: Een geïntegreerde aanpak om Phytophthora uit te schakelen

Govers, F., Oct 2019, In : Gewasbescherming. 50, 5, p. 191-198

Research output: Contribution to journalArticleProfessional

Open Access
2018
5 Citations (Scopus)

A new mechanism for reduced sensitivity to demethylation-inhibitor fungicides in the fungal banana black Sigatoka pathogen Pseudocercospora fijiensis

Díaz-Trujillo, C., Chong, P., Stergiopoulos, I., Meijer, H. J. G., de Wit, P. J. G. M. & Kema, G. H. J., Jun 2018, In : Molecular Plant Pathology. 19, 6, p. 1491-1503

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
black Sigatoka
Mycosphaerella fijiensis
Musa
fungicide
Point Mutation