Research Output

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2019

Endophytic fungi: definitions, diversity, distribution and their significance in plant life.

Schouten, A., 2019, Endophyte biotechnology: potential for agriculture and pharmacology. Schouten, A. (ed.). CABI, p. 6-31 (CABI Biotechnology Series).

Research output: Chapter in Book/Report/Conference proceedingChapter

Saving resources: the exploitation of endophytes by plants for the biosynthesis of multi-functional defence compounds

Schouten, A., 2019, Endophyte biotechnology: potential for agriculture and pharmacology. Schouten, A. (ed.). CABI, p. 122-144 (CABI Biotechnology Series).

Research output: Chapter in Book/Report/Conference proceedingChapter

2017

Bomen en plantenverdelgers

Govers, F., 2017, Schimmels: Van plaag tot bouwmeester. Stichting Biowetenschappen en Maatschappij, p. 29-32 (Cahier Biowetenschappen en Maatschappij; vol. 36, no. 4).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access

Een plaag voor de landbouw

Govers, F., 2017, Schimmels: Van plaag tot bouwmeester. Stichting Biowetenschappen en Maatschappij, p. 50-55 (Cahier Biowetenschappen en Maatschappij; vol. 36, no. 4).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access

Golfbanen met dollarvlekken

de Wit, P. J. G. M., 2017, Schimmels: Van plaag tot bouwmeester. Stichting Biowetenschappen en Maatschappij, p. 44-45 (Cahier Biowetenschappen en Maatschappij; vol. 36, no. 4).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
2016

De wondere wereld der plantenziekten (interview met Francine Govers)

van Gijtenbeek, A-M. & Govers, F., 30 Dec 2016, Beukenbloed - Over de liefde tussen boom en buurt. Uitgeverij Helium, p. 46-49

Research output: Chapter in Book/Report/Conference proceedingChapter

Internationaal ideeën opdoen (interview met Francine Govers)

Stam, D. & Govers, F., 30 Dec 2016, Briljante studente heel origineel!: Negentig jaar Fonds Dr. Catharine van Tussenbroek voor vrouwen in de wetenschap. Uitgeverij Verloren, p. 69-70

Research output: Chapter in Book/Report/Conference proceedingChapter

2015

Plant Pathogenic Fungi and Oomycetes

de Wit, P. J. G. M., 2015, Principles of Plant-Microbe Interactions; Microbes for Sustainable Agriculture. Lugtenberg, B. (ed.). Springer International Publishing Switzerland, p. 79-90 448 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

The Minimal Rhizosphere Microbiome

Raaijmakers, J. M., 2015, Principles of Plant-Microbe Interactions; Microbes for Sustainable Agriculture. Lugtenberg, B. (ed.). Springer International Publishing Switzerland, p. 411-417

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Citations (Scopus)

The Oomycete Phytophthora infestans, the Irish Potato Famine Pathogen

Schoina, C. & Govers, F., 2015, Principles of Plant-Microbe Interactions; Microbes for Sustainable Agriculture. Lugtenberg, B. (ed.). Springer International Publishing Switzerland, p. 371-378 448 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)
2014

Evolutionary Mechanisms Involved in Development of Fungal Secondary Metabolite Gene Clusters

Moore, G. G., Collemare, J., Lebrun, M. H. & Bradshaw, R. E., 5 May 2014, Natural Products: Discourse, Diversity, and Design. Osbourn, A., Goss, R. J. & Carter, G. T. (eds.). Wiley-Blackwell, p. 341-356 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Citations (Scopus)

The genome of Botrytis cinerea, a ubiquitous broad host range necrotroph

Hahn, M., Viaud, M. & van Kan, J. A. L., 2014, Genomics of Plant-Associated Fungi and Oomycetes: Dicot Pathogens. Dean, R. A., Lichens-Park, A. & Kole, C. (eds.). Berlin Heidelber: Springer Verlag, p. 19-44 239 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

18 Citations (Scopus)

Verticillium alfalfae and V. dahliae, Agents of Verticillium Wilt Diseases

Inderbitzin, P., Thomma, B. P. H. J., Klosterman, S. J. & Subbarao, K. V., 2014, Genomics of Plant-Associated Fungi and Oomycetes: Dicot Pathogens. Dean, R. A., Lichens-Park, A. & Kole, C. (eds.). Berlin Heidelberg: Springer Verlag, p. 65-97 239 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Citations (Scopus)
2013

Cladosporium fulvum - tomato pathosystem: fungal infection strategy and plant responses

Ökmen, B. & de Wit, P. J. G. M., 2013, Molecular Plant Immunity. Sessa, G. (ed.). West Sussex, UK: John Wiley and Sons, p. 211-224 304 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pectin as a barrier and nutrient source for fungal plant pathogens

Zhang, L. & van Kan, J. A. L., 2013, A Comprehensive Treatise on Fungi as Experimental Systems for Basic and Applied Research. Kempken, F. (ed.). Heidelberg, Germany, p. 361-365 (The Mycota; no. 11).

Research output: Chapter in Book/Report/Conference proceedingChapter

10 Citations (Scopus)

Perspectives for rhizosphere research

Raaijmakers, J. & Lugtenberg, B. J. J., 2013, Molecular Microbial Ecology of the Rhizosphere. de Bruijn, F. J. (ed.). John Wiley and Sons, p. 1227-1232

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Citations (Scopus)
2012

An unbiased method for the quantitation of disease phenotypes using a custom-built macro plugin for the program ImageJ

Abd-El-Haliem, A., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 635-644 648 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Citations (Scopus)

A one-step affinity-purification protocol to purify NB-LRR immune receptors from plants that mediate resistance to fungal pathogens

Tameling, W. I. L., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 585-590 648 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

Dothideomycete effectors facilitating biotrophic and necrotrophic lifestyles

Rouxel, T. & de Wit, P. J. G. M., 2012, Effectors in Plant-Microbe Interactions. Martin, F. & Kamoun, S. (eds.). Chichester, West Sussex, United Kingdom: John Wiley and Sons, p. 195-218

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Fungal secondary metabolites: ancient toxins and novel effectors in plant-microbe interactions

Collemare, J. & Lebrun, M. H., 2012, Effectors in Plant-Microbe Interactions. Martin, F. & Kamoun, S. (eds.). Chichester, West Sussex, United Kingdom: John Wiley and Sons, p. 377-400

Research output: Chapter in Book/Report/Conference proceedingChapter

19 Citations (Scopus)

Heterologous production of fungal effectors in Pichia pastoris

Kombrink, A., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 209-217 (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Citations (Scopus)

Identification of HR-inducing cDNAs from plant pathogens via a Gateway-compatible binary Potato Virus X-expression vector

van Esse, H. P., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 97-105 (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

In silico identification and characterization of effector catalogs

de Jonge, R., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 415-425 648 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Citations (Scopus)

Isolation of apoplastic fluid from leaf tissue by the vacuum infiltration-centrifugation technique

Joosten, M. H. A. J., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 603-610 648 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

21 Citations (Scopus)

Karyotyping Methods for Fungi

Mehrabi, R., Taga, M., Aghaee, M., de Wit, P. J. G. M. & Kema, G. H. J., 2012, Plant Fungal Pathogens : Methods and Protocols. Bolton, M. D. D. & Thomma, B. P. H. J. P. (eds.). New York, Dordrecht, Heidelberg, London, p. 591-602 645 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Citations (Scopus)

MAP Kinase Phosphorylation and cAMP assessment in fungi

Mehrabi, R., Ben M'Barek, S., Saidi, A., Abrinbana, M., de Wit, P. J. G. M. & Kema, G. H. J., 2012, Plant Fungal Pathogens : Methods and Protocols. Bolton, M. D. D. & Thomma, B. P. H. J. P. (eds.). New York, Dordrecht, Heidelberg, London, p. 571-584 645 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Random insertional mutagenesis in fungal genomes to identify virulence factors

Santhanam, P., 2012, Plant Fungal Pathogens: Methods and Protocols. Bolton, M. D. & Thomma, B. P. H. J. (eds.). New York, USA, p. 509-517 648 p. (Methods in Molecular Biology; no. 835).

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Citations (Scopus)
2010

Necrotrophic fungi: live or let die

Dickman, M. B., van Kan, J. A. L. & Lawrence, C. B., 2010, Cellular and Molecular Biology of Filamentous Fungi. Borkovich, K. & Ebbole, D. (eds.). ASM Press, p. 645-659 802 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2009

Foreword

Govers, F., 2009, Oomycete genetics and genomics: diversity, interactions, and research tools. Lamour, K. & Kamoun, S. (eds.). Hoboken, New Jersey, USA: John Wiley and Sons, p. ix-xi 559 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Gene for gene models and beyond: the Cladosporium fulvum-tomato pathosystem

de Wit, P. J. G. M., Joosten, M. H. A. J., Thomma, B. P. H. J. & Stergiopoulos, I., 2009, Plant Relationships. Deising, H. B. (ed.). Berlin Heidelberg, p. 135-156 (The Mycota; no. Vol. 5).

Research output: Chapter in Book/Report/Conference proceedingChapter

Genome biology cracks enigmas of oomycete plant pathogens

Bouwmeester, K., van Poppel, P. M. J. A. & Govers, F., 2009, Molecular aspects of plant disease resistance. Parker, J. (ed.). Oxford, United Kingdom, p. 102-133 (Annual Plant Reviews; no. 34).

Research output: Chapter in Book/Report/Conference proceedingChapter

22 Citations (Scopus)

The cAMP Signaling and MAP Kinase Pathways in Plant Pathogenic Fungi

Mehrabi, R., Zhao, X., Kim, Y. & Xu, J. R., 2009, The Mycota V (Plant Relationships). Deising, H. B. (ed.). Berlin Heidelberg: Springer, p. 157-172

Research output: Chapter in Book/Report/Conference proceedingChapter

2008

Effectors, their targets and host responses in the pathosystem Cladosporium fulvum-tomato

de Wit, P. J. G. M., Stergiopoulos, I., van t Klooster, J. W., van Esse, H. P., Fradin, E. F., Ellendorff, U., Gabriëls, S. H. E. J., Stulemeijer, I. J. E., Bolton, M. D., Borrás-Hidalgo, O., Tameling, W. I. L., Abd-El-Haliem, A. M., van den Berg-Velthuis, G. C. M., Vervoort, J. J. M., Boeren, S., Joosten, M. H. A. J. & Thomma, B. P. H. J., 2008, Biology of Plant-Microbe Interactions CD. Lorito, M., Woo, S. L. & Scala, F. (eds.). St. Paul, MN, USA, p. np (Biology of Plant-Microbe Interactions; no. 6).

Research output: Chapter in Book/Report/Conference proceedingChapter

Johanna Westerdijk (1883-1961) The grand lady of Dutch plant pathology

Zadoks, J. C. & van Bruggen, A. H. C., 2008, Pioneering Women in Plant Pathology. St. Paul, Minnesota, USA: APS Press, p. 155-167 339 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Lectin receptor kinase 79, a putative target of the Phytophthora infestans effector IPI-O

Bouwmeester, K., Klamer, S., Gouget, A., Haget, N., Canut, H. & Govers, F., 2008, Biology of Plant-Microbe Interactions. Lorito, M., Woo, S. L. & Scala, F. (eds.). St. Paul, MN, USA, (Biology of plant-microbe interactions; no. 6).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
2006

Activity, chemistry and biosynthesis of cyclic lipopeptides produced by Pseudomonas species

de Kock, M. J. D. & Raaijmakers, J. M., 2006, Multitrophic interactions in soil and integrated control: Proceedings of the meeting at Wageningen, The Netherlands, 5-8 June 2005. Raaijmakers, J. M. & Sikora, R. A. (eds.). Dijon Cedex, France, p. 193-197 (IOBC wprs Bulletin; no. 29(2)).

Research output: Chapter in Book/Report/Conference proceedingChapter

Biological control of soil-borne diseases in flowerbulb cultivation in the Netherlands

de Boer, M., van Os, G. J., Bijman, V. & Raaijmakers, J. M., 2006, Multitrophic interactions in soil and integrated control: Proceedings of the meeting at Wageningen, The Netherlands, 5-8 June 2005. Raaijmakers, J. M. & Sikora, R. A. (eds.). Dijon Cedex, France, p. 83-87 (IOBC wprs Bulletin; no. 29(2)).

Research output: Chapter in Book/Report/Conference proceedingChapter

2005

Concepts and methods to assess the phytosanitary quality of soils

Alabouvette, C., Raaijmakers, J. M., de Boer, W., Notz, R., Défago, G., Steinberg, C. & Lemanceau, P., 2005, Microbiological Methods for Assessing Soil Quality. Bloem, J., Hopkins, D. W. & Benedetti, A. (eds.). [S.l.]: CABI Publishing, p. 257-270 307 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Drug transporter mutants of Aspergillus nidulans as tools in fungicide discovery

de Waard, M. A., Andrade, A. C., Braam, C., van Nistelrooy, J. G. M., Swart, K. & Zwiers, L. H., 2005, Modern Fungicides and Antifungal Compounds IV. Dehne, H. W., Gisi, U., Kuck, K. H., Russell, P. E. & Lyr, H. (eds.). Alton, UK: BCPC, p. 13-20

Research output: Chapter in Book/Report/Conference proceedingChapter

Late blight: the perspective from the pathogen

Govers, F., 2005, Potato in progress: science meets practice. Haverkort, A. J. & Struike, P. C. (eds.). Wageningen, The Netherlands: Wageningen Academic Publishers, p. 245-254

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Citations (Scopus)

Recent developments in diagnostics of plant pathogens: A review

Lievens, B., Grauwet, T. J. M. A., Cammue, B. P. A. & Thomma, B. P. H. J., 2005, Recent Research Developments in Microbiology. Pandalai, S. G. (ed.). Kerala, India, p. 57-79 (Recent Research Developments in Microbiology; no. 9).

Research output: Chapter in Book/Report/Conference proceedingChapter

2004

Biosurfactants and biological control of plant pathogens

Ficke, A., Souza, J. T., de Boer, M., Geerds, C. F. & Raaijmakers, J. M., 2004, Multitrophic interactions in soil and integrated control. Sikora, R., Gowen, S., Hauschild, R. & Kiewnick, S. (eds.). Dijon Cedex, France, p. 63-66 (IOBC wprs bulletin; no. vol. 27(1)).

Research output: Chapter in Book/Report/Conference proceedingChapter

Extracellular enzymes and metabolites involved in pathogenesis of Botrytis

Kars, I. & van Kan, J. A. L., 2004, Botrytis: Biology, Pathology and Control. Elad, Y., Williamson, B., Tudzynski, P. & Delen, N. (eds.). Kluwer Academic Publishers, p. 99-118 428 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Fungal (a)virulence factors at the crossroads of disease susceptibility and resistance

Westerink, N., Joosten, M. H. A. J. & de Wit, P. J. G. M., 2004, Fungal disease resistance in plants: biochemistry, molecular biology, and genetic engineering. Punja, Z. K. (ed.). Binghamton, NY 13904-1580, USA: The Haworth Press, Inc., p. 93-137

Research output: Chapter in Book/Report/Conference proceedingChapter

Host specialisation of the oomycete Albugo candida

Meekes, E. T. M., Jeger, M. J. & Raaijmakers, J. M., 2004, Advances in Downy Mildew Research, vol. 2. Spencer-Phillips, P. & Jeger, M. (eds.). p. 119-139 (Developments in plant pathology; no. vol. 16).

Research output: Chapter in Book/Report/Conference proceedingChapter

Influence of environmental factors on the disease cycle of white rust, caused by Albugo candida

Gilijamse, E., Raaijmakers, J. M., Geerds, C. F. & Jeger, M. J., 2004, Advances in Downy Mildew Research, vol. 2. Spencer-Phillips, P. & Jeger, M. (eds.). p. 107-118 (Developments in plant pathology; no. vol. 16).

Research output: Chapter in Book/Report/Conference proceedingChapter

Late blight

Govers, F. & Latijnhouwers, M., 2004, Encyclopedia of Plant and Crop Science. Goodman, R. M. (ed.). CRC Press, 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pathogen defense against biological control

Raaijmakers, J. M., Schoonbeek, H., Schouten, A. & de Waard, M. A., 2004, Multitrophic interactions in soil and integrated control. Sikora, R. A., Gowen, S., Hauschild, R. & Kiewnick, S. (eds.). Dijon Cedex, France, p. 241-245 (IOBC wprs bulletin; no. vol. 27(1)).

Research output: Chapter in Book/Report/Conference proceedingChapter

Plant defence compounds against Botrytis infection

van Baarlen, P., Legendre, L. & van Kan, J. A. L., 2004, Botrytis: Biology, Pathology and Control. Elad, Y., Williamson, B., Tudzynski, P. & Delen, N. (eds.). Kluwer Academic Publishers, p. 143-161

Research output: Chapter in Book/Report/Conference proceedingChapter

2003

The Rhizosphere

Raaijmakers, J. M., 2003, Encyclopedia of Agrochemicals. Vol. 3. John Wiley and Sons

Research output: Chapter in Book/Report/Conference proceedingChapter