Laboratory of Phytopathology

Search results

• Profile hidden Markov models trained on aligned KEGG Orthology sequences for enzyme annotation

  Rodenburg, Y. A. (Creator), de Ridder, D. (Contributor), Govers, F. (Contributor) & Seidl, M. F. (Creator), Wageningen University & Research, 7 Oct 2019

  DOI: 10.4121/uuid:9b6e6aa0-b815-409f-9e96-04828b03290b

  Dataset

• Transcription profiling time series of tomato leaves after infection with a foliar and a vascular fungal pathogen

  van Esse, P. (Creator), Wageningen UR, 8 Oct 2008

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1844/

  Dataset

• Bacteria 16S ribosomal RNA gene, partial sequence

  Mendes, R. (Creator), Pizzirani-Kleiner, A. A. (Creator), Araujo, W. L. (Creator) & Raaijmakers, J. M. (Creator), Wageningen University & Research, 3 Dec 2007

  https://www.ncbi.nlm.nih.gov/popset/148728595

  Dataset

• Draft genomes of nine plant pathogenic Botrytis species

  Valero Jimenez, C. (Creator), Veloso, J. (Creator), Staats, M. (Creator) & van Kan, J. (Creator), Wageningen University, 5 Sept 2017

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA401386

  Dataset

• Botrytis cinerea hypothetical protein gene, complete cds

  Acosta Morel, W. (Creator), Anta Fernández, F. (Creator), Baroncelli, R. (Creator), Becerra, S. (Creator), Thon, M. R. (Creator), van Kan, J. (Creator), Díaz-Mínguez, J. M. (Creator) & Benito, E. P. (Creator), 18 May 2021

  https://www.ncbi.nlm.nih.gov/popset/2037122248

  Dataset

• Monilinia fructicola strain:CPMC6 Genome sequencing and assembly

  Vilanova, L. (Creator), Valero-Jiménez, C. A. (Creator) & van Kan, J. (Creator), Wageningen University & Research, 18 Feb 2018

  https://www.ncbi.nlm.nih.gov/bioproject/503180

  Dataset

• Botryotinia fuckeliana strain T4 genome sequencing, draft assembly version 2

  Staats, M. (Creator) & van Kan, J. (Creator), Wageningen University & Research, 21 Aug 2012

  https://www.ncbi.nlm.nih.gov/bioproject/162725

  Dataset

• Actinomycetia 16S ribosomal RNA gene, partial sequence

  Liu, Y. (Creator), de Bruijn, I. (Creator), Jack, A. L. H. (Creator), Drynan, K. (Creator), van den Berg, A. H. (Creator), Thoen, E. (Creator), Sandoval-Sierra, V. (Creator), Skaar, I. (Creator), van West, P. (Creator), Diéguez-Uribeondo, J. (Creator), van der Voort, M. (Creator), Mendez, R. (Creator), Mazzola, M. (Creator) & Raaijmakers, J. M. (Creator), Wageningen University & Research, 1 Oct 2014

  https://www.ncbi.nlm.nih.gov/popset/573529752

  Dataset

• Genome mining of the rhizosphere bacterium Pseudomonas sp. SHC52

  Schmidt, Y. (Creator), van der Voort, M. (Creator), Crüsemann, M. (Creator), Piel, J. (Creator), Josten, M. (Creator), Sahl, H. G. (Creator), Miess, H. (Creator), Raaijmakers, J. M. (Creator) & Gross, H. (Creator), Wageningen University, 28 May 2014

  https://www.ebi.ac.uk/ena/data/view/PRJEB1710

  Dataset

• Supplemental data for deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’

  Ferjaoui, S. (Creator), Aouini, L. (Creator), Slimane, R. B. (Creator), Ammar, K. (Creator), Dreisigacker, S. (Creator), Schouten, H. (Creator), Sapkota, S. (Creator), Bahri, B. A. (Creator), Ben M’Barek, S. (Creator), Visser, R. (Creator), Kema, G. (Creator) & Hamza, S. (Creator), CIMMYT, 30 Sept 2021

  https://hdl.handle.net/11529/10548618

  Dataset

• Lysobacter antibioticus recombination/repair protein-like (recN) gene, partial sequence

  Gomez Exposito, R. (Creator), Postma, J. (Creator), Raaijmakers, J. M. (Creator) & de Bruijn, I. (Creator), Netherlands Institute of Ecology (NIOO-KNAW), 17 Dec 2015

  https://www.ncbi.nlm.nih.gov/popset/944205673

  Dataset

• Supplementary material from "Phytophthora capsici sterol reductase PcDHCR7 has a role in mycelium development and pathogenicity"

  Wang, W. (Creator), Zhang, F. (Creator), Zhang, S. (Creator), Xue, Z. (Creator), Xie, L. (Creator), Govers, F. (Creator) & Liu, X. (Creator), China Agricultural University, 6 Apr 2022

  DOI: 10.6084/m9.figshare.c.5898474

  Dataset

• Comparative genomics of Sclerotiniaceae

  Valero-Jiménez, C. A. (Creator), Steentjes, M. (Creator), Slot, J. C. (Creator), Shi, X. (Creator), Scholten, O. (Creator) & van Kan, J. (Creator), Wageningen University & Research, 20 Oct 2020

  https://www.ncbi.nlm.nih.gov/bioproject/494516

  Dataset

• Stachybotryaceae translation elongation factor 1-alpha (tef1) gene, partial cds

  Lombard, L. (Creator), Houbraken, J. (Creator), Decock, C. (Creator), Samson, R. A. (Creator), Meijer, M. (Creator), Réblová, M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 8 Jul 2016

  https://www.ncbi.nlm.nih.gov/popset/1041787570

  Dataset

• Ascomycota 18S ribosomal RNA gene, partial sequence

  de Gruyter, J. (Creator), Aveskamp, M. M. (Creator), Woudenberg, J. H. C. (Creator), Verkley, G. J. M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), 19 Jun 2020

  https://www.ncbi.nlm.nih.gov/popset/208879571

  Dataset

• Paradendryphiella 18S ribosomal RNA gene, partial sequence

  Woudenberg, J. H. C. (Creator), Groenewald, J. Z. (Creator), Binder, M. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 10 Jun 2013

  https://www.ncbi.nlm.nih.gov/popset/510121876

  Dataset

• Phacidium RNA polymerase II second largest subunit (RPB2) gene, partial cds

  Crous, P. (Creator), Quaedvlieg, W. (Creator), Hansen, K. (Creator), Hawksworth, D. L. (Creator) & Groenewald, J. Z. (Creator), CBS Fungal Biodiversity Centre, 26 May 2015

  https://www.ncbi.nlm.nih.gov/popset/727352992

  Dataset

• Leotiomycetes 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence

  Crous, P. (Creator), Quaedvlieg, W. (Creator), Hansen, K. (Creator), Hawksworth, D. L. (Creator) & Groenewald, J. Z. (Creator), CBS Fungal Biodiversity Centre, 26 May 2015

  https://www.ncbi.nlm.nih.gov/popset/727352989

  Dataset

• Stachybotryaceae 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence

  Lombard, L. (Creator), Houbraken, J. (Creator), Decock, C. (Creator), Samson, R. A. (Creator), Meijer, M. (Creator), Réblová, M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 8 Jul 2016

  https://www.ncbi.nlm.nih.gov/popset/1041785675

  Dataset

• Leptosphaeria TUB (TUB) gene, partial cds

  de Gruyter, J. (Creator), Woudenberg, J. H. C. (Creator), Aveskamp, M. M. (Creator), Verkley, G. J. M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 11 Oct 2012

  https://www.ncbi.nlm.nih.gov/popset/345103578

  Dataset

• Stachybotryaceae calmodulin (cmdA) gene, partial cds

  Lombard, L. (Creator), Houbraken, J. (Creator), Decock, C. (Creator), Samson, R. A. (Creator), Meijer, M. (Creator), Réblová, M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 8 Jul 2016

  https://www.ncbi.nlm.nih.gov/popset/1041785635

  Dataset

• Pleosporineae 18S ribosomal RNA gene, partial sequence

  de Gruyter, J. (Creator), Woudenberg, J. H. C. (Creator), Aveskamp, M. M. (Creator), Verkley, G. J. M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 11 Oct 2012

  https://www.ncbi.nlm.nih.gov/popset/345103491

  Dataset

• Stachybotryaceae RNA polymerase II second largest subunit (RPB2) gene, partial cds

  Lombard, L. (Creator), Houbraken, J. (Creator), Decock, C. (Creator), Samson, R. A. (Creator), Meijer, M. (Creator), Réblová, M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 8 Jul 2016

  https://www.ncbi.nlm.nih.gov/popset/1041785728

  Dataset

• Stachybotryaceae calmodulin (cmdA) gene, partial cds

  Lombard, L. (Creator), Houbraken, J. (Creator), Decock, C. (Creator), Samson, R. A. (Creator), Meijer, M. (Creator), Réblová, M. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 8 Jul 2016

  https://www.ncbi.nlm.nih.gov/popset/1041787428

  Dataset

• Diaporthaceae translation elongation factor 1-alpha (tef1) gene, partial cds

  Gomes, R. R. (Creator), Glienke, C. (Creator), Videira, S. I. R. (Creator), Lombard, L. (Creator), Groenewald, J. Z. (Creator) & Crous, P. (Creator), CBS Fungal Biodiversity Centre, 5 Jan 2015

  https://www.ncbi.nlm.nih.gov/popset/469784511

  Dataset