Research Output 1986 2020

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2020

Phylogenomics changes our understanding about earwig evolution.

Wipfler, D., Koehler, W., Frandsen, P. B., Donath, A., Liu, S., Machida, R., Misof, B., Peters, R. S., Shimizu, S., Zhou, X. & Simon, S., 13 Jan 2020, In : Systematic Entomology.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Dermaptera
social behavior
phylogeny
insect
phylogenetics
2019
6 Citations (Scopus)

Cell Boundary Confinement Sets the Size and Position of the E. coli Chromosome

Wu, F., Swain, P., Kuijpers, L., Zheng, X., Felter, K., Guurink, M., Solari, J., Jun, S., Shimizu, T. S., Chaudhuri, D., Mulder, B. & Dekker, C., 8 Jul 2019, In : Current Biology. 29, 13, p. 2131-2144.e4

Research output: Contribution to journalArticleAcademicpeer-review

Chromosomes
Escherichia coli
chromosomes
cells
chromosome morphology
8 Citations (Scopus)

CLASP stabilization of plus ends created by severing promotes microtubule creation and reorientation

Lindeboom, J. J., Nakamura, M., Saltini, M., Hibbel, A., Walia, A., Ketelaar, T., Emons, A. M. C., Sedbrook, J. C., Kirik, V., Mulder, B. M. & Ehrhardt, D. W., 7 Jan 2019, In : The Journal of cell biology. 218, 1, p. 190-205

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microtubules
Polymers
Plant Cells
Guanosine Triphosphate
Light

Defense of pyrethrum flowers: repelling herbivore and recruiting carnivore by producing aphid alarm pheromone

Li, J., Hu, H., Mao, J., Yu, L., Stoopen, G., Wang, M., Mumm, R., de Ruijter, N. C. A., Dicke, M., Jongsma, M. A. & Wang, C., Aug 2019, In : New Phytologist. 223, 3, p. 1607-1620

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Chrysanthemum cinerariifolium
alarm pheromones
Aphids
Herbivory
Pheromones
4 Citations (Scopus)

Exocyst subunit Sec6 is positioned by microtubule overlaps in the moss phragmoplast prior to cell plate membrane arrival

Tang, H., de Keijzer, J., Overdijk, E. J. R., Sweep, E., Steentjes, M., Vermeer, J. E. M., Janson, M. E. & Ketelaar, T., 11 Feb 2019, In : Journal of Cell Science. 132, 3

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bryophyta
Microtubules
Cell Membrane
Cytokinesis
Munc18 Proteins

Geometric cues forecast the switch from two- to three-dimensional growth in Physcomitrella patens

Tang, H., Duijts, K., Bezanilla, M., Scheres, B., Vermeer, J. E. M. & Willemsen, V., 22 Oct 2019, In : New Phytologist.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bryopsida
Physcomitrella patens
Cues
gametophores
Growth

Gravity-driven syneresis in model low-fat mayonnaise

Wu, Q., Punter, M. T. J. J. M., Kodger, T. E., Arnaudov, L., Mulder, B. M., Stoyanov, S. & Van Der Gucht, J., 31 Oct 2019, In : Soft Matter. 15, 46, p. 9474-9481 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
starches
fats
Starch
Gravitation
Fats

Root architecture system of oilseed species from the Jatropha genus during seed development and germination

de Brito, C. D., Loureiro, M. B., Ribeiro, P. R., Vasconcelos, P. C. T., Moreno, M. L. V., Fernandez, L. G., Hilhorst, H. W. M., van Lammeren, A., Ligterink, W. & de Castro, R. D., 1 Nov 2019, In : Industrial Crops and Products. 139, 111514.

Research output: Contribution to journalArticleAcademicpeer-review

Jatropha
oilseeds
seed development
seed germination
embryo (plant)
3 Citations (Scopus)

Small RNA molecules and their role in plant disease

Rose, L. E., Overdijk, E. J. R. & van Damme, M., Jan 2019, In : European Journal of Plant Pathology. 153, 1, p. 1-14

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant diseases and disorders
RNA
RNA interference
pathogens
gene expression

The Flower Petal Training System in Microsurgery: Validation of a Training Model Using a Randomized Controlled Trial

Volovici, V., Dammers, R., Lawton, M. T., Dirven, C. M. F., Ketelaar, T., Lanzino, G. & Zamfirescu, D. G., Dec 2019, In : Annals of Plastic Surgery. 83, 6, p. 697-701 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

Microsurgery
Randomized Controlled Trials
Femoral Artery
Chickens
Leg
Open Access
Confocal Microscopy
plant pathogens
exocytosis
Exocytosis
Infection
2018
13 Citations (Scopus)

A computational framework for cortical microtubule dynamics in realistically shaped plant cells

Chakrabortty, B., Blilou, I., Scheres, B. & Mulder, B. M., 1 Feb 2018, In : PLoS Computational Biology. 14, 2, e1005959.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microtubules
Plant Cells
microtubules
Geometry
Cell
13 Citations (Scopus)

A Plausible Microtubule-Based Mechanism for Cell Division Orientation in Plant Embryogenesis

Chakrabortty, B., Willemsen, V., de Zeeuw, T., Liao, C. Y., Weijers, D., Mulder, B. & Scheres, B., 8 Oct 2018, In : Current Biology. 28, 19, p. 3031-3043.e2

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microtubules
Cell Division
microtubules
Embryonic Development
cell division
9 Citations (Scopus)

Arabidopsis phospholipase C3 is involved in lateral root initiation and ABA responses in seed germination and stomatal closure

Zhang, Q., van Wijk, R., Shahbaz, M., Roels, W., Van Schooten, B., Vermeer, J. E. M., Zarza, X., Guardia, A., Scuffi, D., García-Mata, C., Laha, D., Williams, P., Willems, L. A. J., Ligterink, W., Hoffmann-Benning, S., Gillaspy, G., Schaaf, G., Haring, M. A., Laxalt, A. M. & Munnik, T., 1 Mar 2018, In : Plant and Cell Physiology. 59, 3, p. 469-486

Research output: Contribution to journalArticleAcademicpeer-review

Phospholipases
guard cells
Germination
Arabidopsis
Seeds
15 Citations (Scopus)

Breakout — lateral root emergence in Arabidopsis thaliana

Stoeckle, D., Thellmann, M. & Vermeer, J. E. M., Feb 2018, In : Current Opinion in Plant Biology. 41, p. 67-72

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis thaliana
endodermis
edaphic factors
epidermis (plant)
organogenesis
2 Citations (Scopus)
Open Access
Microfluidics
HEK293 Cells
G-Protein-Coupled Receptors
calcium
Calcium
22 Citations (Scopus)

Diffusible repression of cytokinin signalling produces endodermal symmetry and passage cells

Andersen, T. G., Naseer, S., Ursache, R., Wybouw, B., Smet, W., De Rybel, B., Vermeer, J. E. M. & Geldner, N., 22 Mar 2018, In : Nature. 555, 7697, p. 529-533

Research output: Contribution to journalArticleAcademicpeer-review

Cytokinins
Xylem
Transcytosis
Phloem
Angiosperms
6 Citations (Scopus)

Down-regulation of cladofulvin biosynthesis is required for biotrophic growth of Cladosporium fulvum on tomato: A secondary metabolite prevents fungal biotrophy

Griffiths, S., Mesarich, C. H., Overdijk, E. J. R., Saccomanno, B., De Wit, P. J. G. M. & Collemare, J., 25 Jan 2018, In : Molecular Plant Pathology. 19, 2, p. 369-380

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Passalora fulva
Cladosporium
secondary metabolite
Lycopersicon esculentum
secondary metabolites
7 Citations (Scopus)

Effects of systematic variation in size and surface coating of silver nanoparticles on their in vitro toxicity to macrophage RAW 264.7 cells

Makama, S. I., Kloet, S. K., Piella, J., van den Berg, J. H. J., de Ruijter, N. C. A., Puntes, V. F., Rietjens, I. M. C. M. & van den Brink, N. W., 1 Mar 2018, In : Toxicological sciences. 162, 1, p. 79-88

Research output: Contribution to journalArticleAcademicpeer-review

Macrophages
Silver
Nanoparticles
Toxicity
Reactive Oxygen Species
12 Citations (Scopus)

Green light for quantitative live-cell imaging in plants

Grossmann, G., Krebs, M., Maizel, A., Stahl, Y., Vermeer, J. E. M. & Ott, T., 29 Jan 2018, In : Journal of Cell Science. 131, 2, jcs.209270.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Methyl Green
Plant Cells
Microscopy
Light
Photons
25 Citations (Scopus)

Root branching toward water involves posttranslational modification of transcription factor ARF7

Orosa-Puente, B., Leftley, N., von Wangenheim, D., Banda, J., Srivastava, A. K., Hill, K., Truskina, J., Bhosale, R., Morris, E., Srivastava, M., Kümpers, B., Goh, T., Fukaki, H., Vermeer, J. E. M., Vernoux, T., Dinneny, J. R., French, A. P., Bishopp, A., Sadanandom, A. & Bennett, M. J., 21 Dec 2018, In : Science. 362, 6421, p. 1407-1410

Research output: Contribution to journalArticleAcademicpeer-review

Sumoylation
Post Translational Protein Processing
Indoleacetic Acids
Transcription Factors
Water
7 Citations (Scopus)

Solanaceous exocyst subunits are involved in immunity to diverse plant pathogens

Du, Y., Overdijk, E. J. R., Berg, J. A., Govers, F. & Bouwmeester, K., 23 Jan 2018, In : Journal of Experimental Botany. 69, 3, p. 655-666

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant pathogens
Immunity
immunity
Nicotiana benthamiana
Arabidopsis
16 Citations (Scopus)

SPR2 protects minus ends to promote severing and reorientation of plant cortical microtubule arrays

Nakamura, M., Lindeboom, J. J., Saltini, M., Mulder, B. M. & Ehrhardt, D. W., 1 Mar 2018, In : Journal of Cell Biology. 217, 3, p. 915-927

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microtubules
Polymers
Centrosome
Arabidopsis
Computer Simulation
2017
8 Citations (Scopus)

Chemical changes and increased degradability of wheat straw and oak wood chips treated with the white rot fungi Ceriporiopsis subvermispora and Lentinula edodes

van Kuijk, S. J. A., Sonnenberg, A. S. M., Baars, J. J. P., Hendriks, W. H., del Río, J. C., Rencoret, J., Gutiérrez, A., de Ruijter, N. C. A. & Cone, J. W., 2017, In : Biomass and Bioenergy. 105, p. 381-391

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Ceriporiopsis subvermispora
Lentinula edodes
white-rot fungi
wood chips
Straw
6 Citations (Scopus)
Open Access
Phytophthora infestans
Plant Cells
Cell Wall
Actins
Oomycetes
14 Citations (Scopus)

How selective severing by katanin promotes order in the plant cortical microtubule array

Deinum, E. E., Tindemans, S. H., Lindeboom, J. & Mulder, B. M., 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 27, p. 6942-6947

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microtubules
katanin
Plant Development
Computer Simulation
Cues
46 Citations (Scopus)

Plant Cytokinesis: Terminology for Structures and Processes

Smertenko, A., Assaad, F., Baluška, F., Bezanilla, M., Buschmann, H., Drakakaki, G., Hauser, M. T., Janson, M., Mineyuki, Y., Moore, I., Müller, S., Murata, T., Otegui, M. S., Panteris, E., Rasmussen, C., Schmit, A. C., Šamaj, J., Samuels, L., Staehelin, L. A., Van Damme, D. & 2 others, Wasteneys, G. & Žárský, V., Dec 2017, In : Trends in Cell Biology. 27, 12, p. 885-894

Research output: Contribution to journalArticleAcademicpeer-review

Cytokinesis
Terminology
Plant Cells
Actin Cytoskeleton
Microtubules
14 Citations (Scopus)

Shortening of Microtubule overlap regions defines membrane delivery sites during plant cytokinesis

de Keijzer, J., Kieft, H., Ketelaar, T., Goshima, G. & Janson, M. E., 2017, In : Current Biology. 27, 4, p. 514-520

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Kinesin
Cytokinesis
cytokinesis
Microtubules
shortenings
10 Citations (Scopus)

Stacks off tracks: a role for the golgin AtCASP in plant endoplasmic reticulum-golgi apparatus tethering.

Osterrieder, A., Sparkes, I. A., Botchway, S. W., Ward, A., Ketelaar, T., de Ruijter, N. C. A. & Hawes, C., 15 Jun 2017, In : Journal of Experimental Botany. 68, 13, p. 3339-3350

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Golgi Apparatus
Golgi apparatus
Endoplasmic Reticulum
endoplasmic reticulum
Optical Tweezers
6 Citations (Scopus)

Unlocking the story in the swab: A new genotyping assay for the amphibian chytrid fungus Batrachochytrium dendrobatidis

Byrne, A. Q., Rothstein, A. P., Poorten, T. J., Erens, J., Settles, M. L. & Rosenblum, E. B., 1 Nov 2017, In : Molecular Ecology Resources. 17, 6, p. 1283-1292 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Chytridiomycota
Amphibians
amphibian
genotyping
amphibians
2016
10 Citations (Scopus)

Interaction between the moss Physcomitrella patens and Phytophthora: A novel pathosystem for live-cell imaging of subcellular defence

Overdijk, E. J. R., De Keijzer, J., De Groot, D., Schoina, C., Bouwmeester, K., Ketelaar, T. & Govers, F., 2016, In : Journal of Microscopy. 263, 2, p. 171-180

Research output: Contribution to journalArticleAcademicpeer-review

Bryopsida
Phytophthora
Bryophyta
Microscopy
Up-Regulation
10 Citations (Scopus)

Low-phosphate induction of plastidal stromules is dependent on strigolactones but not on the canonical strigolactone signaling component MAX2

Vismans, G., van der Meer, T., Langevoort, O., Schreuder, M., Bouwmeester, H., Peisker, H., Dörman, P., Ketelaar, T. & van der Krol, S., 2016, In : Plant Physiology. 172, 4, p. 2235-2244

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plastids
Plant Growth Regulators
Droughts
Fungi
Phosphates
5 Citations (Scopus)
Open Access
Metabolomics
Microfluidics
Biosensing Techniques
Biosensors
Assays
17 Citations (Scopus)

Shear-induced structuring as a tool to make anisotropic materials using soy protein concentrate

Grabowska, K. J., Zhu, S., Dekkers, B. L., de Ruijter, N. C. A., Gieteling, J. & van der Goot, A. J., 2016, In : Journal of Food Engineering. 188, p. 77-86

Research output: Contribution to journalArticleAcademicpeer-review

soy protein concentrate
Soybean Proteins
confocal laser scanning microscopy
shear stress
carbohydrate structure
2 Citations (Scopus)

Tolerância à dessecação e longevidade de sementes germinadas de Sesbania virgata (Cav.) Pers.

Translated title of the contribution: Desiccation tolerance and longevity of germinated Sesbania virgata (Cav.) Pers. seedsCosta, M. C. D., Faria, J. M. R., José, A. C., Ligterink, W. & Hilhorst, H. W. M., 2016, In : Journal of seed science. 38, 1, p. 50-56

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Sesbania
desiccation (plant physiology)
seeds
root radicle
osmotic treatment
28 Citations (Scopus)

Transient production of artemisinin in Nicotiana benthamiana is boosted by a specific lipid transfer protein from A. annua

Wang, B., Kashkooli, A. B., Sallets, A., Ting, J., de Ruijter, N. C. A., Olofsson, L., Brodelius, P., Olofsson, L., Boutry, M., Bouwmeester, H. & van der Krol, S., 2016, In : Metabolic Engineering. 38, p. 159-169

Research output: Contribution to journalArticleAcademicpeer-review

Biosynthesis
Staphylococcal Protein A
Artemisia annua
Drug Resistance
Lipids
2015
3 Citations (Scopus)

Amphibian and reptile records from around the Betsiboka Delta area in North-Western Madagascar

Rakotoarison, A., Erens, J., Ratsoavina, F. M. & Vences, M., 2015, In : Herpetology Notes. 8, p. 535-543

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Scincidae
Madagascar
reptiles
amphibians
burrowing
7 Citations (Scopus)

Deletion of the tail domain of the kinesin-5 Cin8 affects its directionality

Düselder, A., Fridman, V., Thiede, C., Wiesbaum, A., Goldstein, A., Klopfenstein, D. R., Zaitseva, O., Janson, M. E., Gheber, L. & Schmidt, C. F., 3 Jul 2015, In : Journal of Biological Chemistry. 290, 27, p. 16841-16850

Research output: Contribution to journalArticleAcademicpeer-review

Kinesin
Ionic strength
Osmolar Concentration
Molecules
60 Citations (Scopus)

Diffusible crosslinkers generate directed forces in microtubule networks

Lansky, Z., Braun, M., Diez, S. & Janson, M. E., 2015, In : Cell. 160, 6, p. 1159-1168

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microtubules
Optical tweezers
Pistons
Mechanics
Proteins

Een jasje voor het bloeden

Kleis, R., van Lammeren, A. A. M. & Korsuize, C. A., 2015, In : Resource: nieuwssite voor studenten en medewerkers van Wageningen UR. 9, 17, p. 18-19

Research output: Contribution to journalArticleProfessional

Open Access
3 Citations (Scopus)

Effect of flumorph on F-actin dynamics in the potato late blight pathogen Phytophthora infestans

Hua, C., Kots, K., Ketelaar, T., Govers, F. & Meijer, H. J. G., 2015, In : Phytopathology. 105, 4, p. 419-423

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytophthora infestans
microfilaments
hyphae
actin
Oomycetes

Microscopische gasveer levert kracht in cellen

Janson, M. E., Lansky, Z. & Ten Wolde, P. R., 2015, In : Nederlands Tijdschrift voor Natuurkunde. 81, 7, p. 244-247

Research output: Contribution to journalArticleProfessional

4 Citations (Scopus)

Self-healing microtubules

Mulder, B. & Janson, M. E., 2015, In : Nature Materials. 14, p. 1080-1081

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
healing
Repair
damage
2014
14 Citations (Scopus)

Actin dynamics in Phytophthora infestans; rapidly reorganizing cables and immobile, long-lived plaques

Meijer, H. J. G., Hua, C., Kots, K., Ketelaar, T. & Govers, F., 2014, In : Cellular Microbiology. 16, 6, p. 948-961 28 p.

Research output: Contribution to journalArticleAcademicpeer-review

Phytophthora infestans
Actin Cytoskeleton
Actins
Hyphae
Oomycetes
5 Citations (Scopus)

Characterization of polarity development through 2- and 3-D imaging during the initial phase of microspore embryogenesis in Brassica napus L.

Dubas, E., Custers, J., Kieft, H., Wedzony, M. & van Lammeren, A. A. M., 2014, In : Protoplasma. 251, 1, p. 103-113

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Body Patterning
Brassica napus
Three-Dimensional Imaging
microspores
embryo (plant)
36 Citations (Scopus)

Colloidal liquid crystals in rectangular confinement: theory and experiment

Lewis, A. H., Garlea, I., Alvarado, J., Dammone, O. J., Howell, P. D., Majumdar, A., Mulder, B., Lettinga, M. P., Koenderink, G. H. & Aarts, D. G. A. L., 2014, In : Soft Matter. 10, 39, p. 7865-7873

Research output: Contribution to journalArticleAcademicpeer-review

Liquid Crystals
Viruses
liquid crystals
viruses
Defects

Is kastanjebloedingsziekte te genezen?

van Lammeren, A. A. M. & van Kuik, A. J., 2014, In : Tuin en Landschap. 36, 6, p. 32-33

Research output: Contribution to journalArticleProfessional

Open Access
9 Citations (Scopus)

Microtubule networks for plant cell division

de Keijzer, J., Mulder, B. M. & Janson, M. E., 2014, In : Systems and synthetic biology. 8, 3, p. 187-194

Research output: Contribution to journalArticleAcademicpeer-review

Plant Cells
Cell membranes
Microtubules
Cell Division
Cell Membrane

Mogelijke doorbraak in genezing kastanjebloedingsziekte

van Kuik, A. J. & van Lammeren, A. A. M., 2014, In : De Boomkwekerij. 2014, 7, p. 22-23

Research output: Contribution to journalArticleProfessional

Open Access

Root hairs

Grierson, C., Nielsen, E., Ketelaar, T. & Schiefelbein, J., 2014, In : The Arabidopsis book. 12, e0172.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
root hairs
Arabidopsis
cells
cell biology
plant development