Projects per year
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Active
FIBERME
Boneschansker, M. (PhD candidate), Kleerebezem, M. (Promotor), Medema, M. (Promotor), Boekhorst, J. (Co-promotor) & Probst, D. (Co-promotor)
1/09/24 → …
Project: PhD
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Shedding light on the mechanisms of actions supporting B. l. juvenis beneficial effects.
Lertxundi Gomara, I. (PhD candidate), Kleerebezem, M. (Promotor) & Duboux, S. (Co-promotor)
1/02/24 → …
Project: PhD
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Ionophore resistance genes and the molecular epidemiology of AMR plasmids carrying ionophore resistance in a One Health approach
Schapendonk, C. (PhD candidate), Wells, J. (Promotor), Pikkemaat, M. (Co-promotor) & Stassen, J. (Co-promotor)
1/05/23 → …
Project: PhD
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Microbiome signatures of pig health
Gujare, M. (PhD candidate), Kleerebezem, M. (Promotor), Smidt, H. (Co-promotor) & Wells, J. (Co-promotor)
15/03/23 → …
Project: PhD
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Using organoid models to study intestinal a-Synuclein pathology in Parkinson’s disease and its relationship to the gut microbiota
Fang, Z. (PhD candidate) & Wells, J. (Promotor)
15/12/22 → …
Project: PhD
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Organoid models for research on post-weaning diarrhoea
Vellalara, O. (PhD candidate), Wells, J. (Promotor) & Smidt, H. (Co-promotor)
1/12/22 → …
Project: PhD
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It takes IL-22 to tango: interleukin-22 in intestinal health and disease in zebrafish
Kidess, E. (PhD candidate), Keijer, J. (Promotor), Wells, J. (Promotor), Brugman, S. (Co-promotor) & de Boer, V. (Co-promotor)
16/12/21 → …
Project: PhD
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Effects of Pesticides on the Human Microbiome and Organ Function.
Gerritse, M. (PhD candidate), Wells, J. (Promotor) & Boekhorst, J. (Co-promotor)
23/08/21 → …
Project: PhD
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Transposon-insertion sequencing to identify novel antimicrobial drug targets
Juanpere Borras, M. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/08/21 → …
Project: PhD
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Effects of pesticide mixtures on insects
Henry, E. (PhD candidate), van Langevelde, F. (Promotor), Wells, J. (Co-promotor) & van Dooremalen, C. (Co-promotor)
15/05/21 → …
Project: PhD
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Epigenetic imprinting by microbial short-chain fatty acids.
Leeflang, A. (PhD candidate), Kleerebezem, M. (Promotor), Wells, J. (Promotor) & Steegenga, W. (Co-promotor)
1/02/20 → …
Project: PhD
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Organoid Models and Genome Editing to Investigate Fucosylation of Epithelial Receptors and Disease Resistance in Pigs.
Ritchie Martinez, A. (PhD candidate), Wells, J. (Promotor) & van der Hee, B. (Co-promotor)
7/01/20 → …
Project: PhD
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Seeking novel strategies to control Streptococcus suis infection in young pigs
Guan, X. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/01/20 → …
Project: PhD
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Implementation of CRISPRi in Streptococcus suis
Gussak, A. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/10/18 → …
Project: PhD
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Structure and function of an essential TCS drug target in pathogenic Streptococci
Bem, A. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/09/11 → …
Project: PhD
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Finished
Interaction of S. suis with endothelium/epithelium during invading Blood-Central Nervous System barriers and characterization of putative virulence factors
Zhao, T. (PhD candidate), Wells, J. (Promotor), Brugman, S. (Co-promotor) & van Baarlen, P. (Co-promotor)
18/03/20 → 30/09/24
Project: PhD
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Tryptophan catabolism by gut microbiota: a bridge connecting food science and human nutrition
Huang, Z. (PhD candidate), Fogliano, V. (Promotor), Wells, J. (Promotor) & Capuano, E. (Co-promotor)
10/10/18 → 7/02/23
Project: PhD
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EU Cartnet
Fernandes de Oliveira, I. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
28/05/18 → 17/05/23
Project: PhD
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Novel sources of microbial diversity for new antibiotics.
Vind, K. (PhD candidate) & Wells, J. (Promotor)
2/05/18 → 12/12/23
Project: PhD
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Development of new antibiotics targeting histidine kinases regulating virulence mechanisms.
Fernandez Ciruelos, B. (PhD candidate) & Wells, J. (Promotor)
15/04/18 → 22/05/23
Project: PhD
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Microbiome fortification for healtier pigs through metagenomics-driven culturomics and microbial bioactive metabolite discovery
Fredriksen, S. (PhD candidate), Wells, J. (Promotor), Boekhorst, J. (Co-promotor) & van Baarlen, P. (Co-promotor)
3/04/18 → 31/01/23
Project: PhD
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Probiotics processing conditions and their impact on biological activities.
Duboux, S. (PhD candidate) & Kleerebezem, M. (Promotor)
1/03/18 → 9/12/22
Project: PhD
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Evolutionary trade-offs in dairy fermentation: Environmental modulation of lactococcal enzyme activities and its impact on cheese.
Nugroho, A. (PhD candidate) & Kleerebezem, M. (Promotor)
1/12/16 → 25/04/23
Project: PhD
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Host-metabolite interactions in the piglet intestine and its relation to diarrhea
van der Hee, B. (PhD candidate), Wells, J. (Promotor) & Smidt, H. (Co-promotor)
1/11/16 → 28/06/23
Project: PhD
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Evolutionary trade-offs in dairy fermentations - Proteome dynamics.
van Olst, B. (PhD candidate) & Kleerebezem, M. (Promotor)
1/10/16 → 19/12/23
Project: PhD
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Stimulating early foraging in piglets to accelerate their development and improve their performance around weaning
Choudhury, R. (PhD candidate), Kleerebezem, M. (Promotor) & Bolhuis, L. (Co-promotor)
6/01/16 → 5/01/21
Project: PhD
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Exploiting microbiome to prevent and treat human diseases.
Winaris, N. (PhD candidate), Wells, J. (Promotor) & Kranenbarg-Stolte, E. (Co-promotor)
1/09/15 → 14/02/20
Project: PhD
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Tailoring the design of antioxidant dietary fibres to optimize health benefits fo polypenols.
Koper, J. (PhD candidate), Fogliano, V. (Promotor), Wells, J. (Promotor), Capuano, E. (Co-promotor) & Loonen-Jaklofsky, L. (Co-promotor)
1/09/15 → 14/02/20
Project: PhD
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Match making between pre- and probiotics for enhanced in situ delivery in the intestinal tract.
Führen, J. (PhD candidate), Kleerebezem, M. (Promotor) & Schols, H. (Promotor)
2/03/15 → 8/01/21
Project: PhD
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Non-GMO methodologies for introducing desirable traits in food grade LAB and Bacilli-FS10.
van der Els, S. (PhD candidate) & Kleerebezem, M. (Promotor)
25/08/14 → 11/09/23
Project: PhD
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Food for the gate keeper
Venkatasubramanian, P. B. (PhD candidate), Wells, J. (Promotor), Mes, J. (Co-promotor), Saccenti, E. (Co-promotor) & de Wit, N. (Co-promotor)
24/05/13 → 11/06/18
Project: PhD
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Models of dietary effects on immune responses in pigs
Benis, N. (PhD candidate), Martins dos Santos, V. (Promotor), Smits, M. (Promotor), Schokker, D. (Co-promotor) & Suarez-Diez, M. (Co-promotor)
6/03/13 → 4/07/17
Project: PhD
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Dietary Proteins: Effects on gut health and functioning in pigs and poultry
Kar, S. (PhD candidate), Smits, M. (Promotor), Wells, J. (Promotor), Jansman, A. (Co-promotor) & Schokker, D. (Co-promotor)
15/01/13 → 19/06/17
Project: PhD
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Mucosal interactions: High throughput screening and mechanisms.
Fernandez Gutierrez, M. (PhD candidate) & Kleerebezem, M. (Promotor)
1/10/12 → 16/03/18
Project: PhD
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Antimicrobial peptides with therapeutic potential from the skins of frogs of the Pepidae family
Wells, J. (CoI)
1/01/12 → 7/05/13
Project: PhD
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Eukaryotic antibiotic peptides (EAP) as an alternative to conventional antibiotic therapy
Gaiser, R. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/10/11 → 7/10/16
Project: PhD
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Q-fever pathogen omics
Kuley, R. (PhD candidate), Smits, M. (Promotor), Wells, J. (Promotor) & Bossers, A. (Co-promotor)
1/09/11 → 8/05/17
Project: PhD
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Food induced modulation of the intestinal immune barrier. The role of mucus and mucins in intestinal immune barrier.
Sovran, B. (PhD candidate), Wells, J. (Promotor) & Dekker, J. (Co-promotor)
16/08/11 → 23/10/15
Project: PhD
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Molecular interactions of mucosal tissues and bacteria
Lee, I.-C. (PhD candidate) & Kleerebezem, M. (Promotor)
1/04/11 → 31/03/16
Project: PhD
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Role of two component system in Streptococcus Suis
Zaccaria, E. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/10/10 → 14/12/15
Project: PhD
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Interactions of probiotics and commensal bacteria with the gut mucosa and in vivo trafficking.
Rossi, O. (PhD candidate) & Wells, J. (Promotor)
1/09/08 → 22/03/13
Project: PhD
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Microbial and nutritional modulation of defensive (glyco)proteins and peptides from Paneth cells and goblet cells: their use as biomarkers of epithelial integrity.
Loonen-Jaklofsky, L. (PhD candidate), Wells, J. (Promotor) & van Baarlen, P. (Co-promotor)
1/04/08 → 13/09/13
Project: PhD
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Network based models of innate signalling pathways
Wells, J. (CoI) & van Baarlen, P. (CoI)
5/03/08 → 30/06/10
Project: PostDoc
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Role of cell envelope proteins in virulence and pathogenicity of Streptococcus suis infections
Ferrando, L. (PhD candidate), Wells, J. (Promotor), Smith, H. (Co-promotor) & van Baarlen, P. (Co-promotor)
1/03/08 → 4/06/12
Project: PhD
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Molecular mechanism of host responses to probiotics
Meijerink, M. (PhD candidate), Savelkoul, H. (Promotor) & Wells, J. (Promotor)
1/11/07 → 11/11/11
Project: PhD