Food Microbiology

Search results

• Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strains

  Mols, J. M. (Creator), Wageningen University, 25 Nov 2009

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13773

  Dataset

• Listeria monocytogenes SOS response determined after mitomycin C exposure

  van der Veen, S. (Creator), van Schalkwijk, S. (Creator), Molenaar, D. (Creator), de Vos, W. (Creator), Abee, T. (Creator) & Wells-Bennik, M. H. J. (Creator), Wageningen University, 25 Nov 2009

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE12634

  Dataset

• Phylogenetic footprinting and transcriptome profiling reveal new roles for two Bacillus cereus two-component systems

  de Been, M. (Creator), Brillard, J. (Creator), Brousolle, V. (Creator) & Abee, T. (Creator), Wageningen UR, 31 Dec 2014

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE18523

  Dataset

• Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987

  Wijman, J. (Creator), Mols, M. (Creator), Tempelaars, M. (Creator) & Abee, T. (Creator), Wageningen UR, 10 Oct 2015

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE24620

  Dataset

• A novel hybrid kinase is essential for regulating the σB-mediated stress response of Bacillus cereus.

  de Been, M. W. H. J. (Creator), Tempelaars, M. (Creator), van Schaik, W. (Creator), Moezelaar, R. (Creator), Siezen, R. J. (Creator) & Abee, T. (Creator), Wageningen UR, 17 Dec 2009

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE14589

  Dataset

• Bacillus subtilis group type II DNA gyrase subunit A gene, partial cds

  Líma, L. J. R. (Creator), van der Velpen, V. (Creator), Wolkers-Rooijackers, J. C. M. (Creator), Kamphuis, H. J. (Creator), Zwietering, M. H. (Creator) & Nout, M. J. R. (Creator), Wageningen University & Research, 29 Mar 2012

  https://www.ncbi.nlm.nih.gov/popset/378406282

  Dataset

• Bacillaceae 16S ribosomal RNA gene, partial sequence

  Líma, L. J. R. (Creator), Kamphuis, H. J. (Creator), Nout, M. J. R. (Creator) & Zwietering, M. H. (Creator), Wageningen University & Research, 7 May 2011

  https://www.ncbi.nlm.nih.gov/popset/298569375

  Dataset

• Bacillus subtilis subsp. subtilis strain:M1 Genome sequencing and assembly

  Líma, L. J. R. (Creator), Kamphuis, H. J. (Creator), Nout, M. J. R. (Creator) & Zwietering, M. H. (Creator), Wageningen University & Research, 16 May 2017

  https://www.ncbi.nlm.nih.gov/bioproject/238340

  Dataset

• Study of the temporal changes in the bovine udder microbioa of healthy quarters

  Winther, A. R. (Creator), Narvhus, J. A. (Creator), Smistad, M. (Creator), Da Silva Duarte, V. (Creator), Bombelli, A. (Creator) & Porcellato, D. (Creator), Norwegian University of Life Sciences, 5 Jan 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB47169

  Dataset

• Genome sequence of the rat gut bacterium Romboutsia ilealis CRIB

  Gerritsen, J. (Creator), Timmerman, H. M. (Creator), Fuentes, S. (Creator), van Minnen, L. P. (Creator), Panneman, H. (Creator), Konstantinov, S. R. (Creator), Rombouts, F. M. (Creator), Gooszen, H. G. (Creator), Akkermans, L. M. A. (Creator), Smidt, H. (Creator) & Rijkers, G. T. (Creator), Wageningen University, 31 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB4727

  Dataset

• Microaerobic metabolism of lactate and propionate enhances vitamin B12 production in Propionibacterium freudenreichii

  Dank, A. (Creator), Biel, G. (Creator), Abee, T. (Creator) & Smid, E. J. (Creator), Wageningen University, 29 Oct 2022

  DOI: 10.6084/m9.figshare.c.6272277

  Dataset

• Batch wt vs hyper +_- pABA Normal int_Filtered fg-bg2

  Mars, A. (Creator), Faijes, M. (Creator), Molenaar, D. (Creator), de Vos, R. C. (Creator), Klaus, S. M. (Creator), Hanson, A. D. (Creator), de Vos, W. M. (Creator) & Smid, E. J. (Creator), NIZO, 31 May 2008

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE8956

  Dataset

• Data Underlying the publication: Characterization of extracellular vesicles from Streptococcus thermophilus 065 and their potential capacity as immune modulators

  Ortiz Camargo, A. (Creator), van Mastrigt, O. (Creator), Gouw, J. W. (Creator), Li, Y. (Creator), Bongers, R. S. (Creator), Knol, J. (Creator), van Bergenhenegouwen, J. (Creator), Abee, T. (Creator) & Smid, E. (Creator), Wageningen University & Research, 11 Oct 2024

  DOI: 10.4121/9d74337b-f44a-4d68-82db-c3b88662268d

  Dataset

• Data underlying analysis of the microbial community composition in the manuscript " The impact of processing technology on microbial community composition and functional properties of Beninese maize ogi"

  Sanya, C. (Creator), Linnemann, A. (Creator), Madode, Y. (Creator), Schoustra, S. (Creator) & Smid, E. (Creator), Wageningen University & Research, 7 Feb 2024

  DOI: 10.4121/ab7bc46e-e163-4cec-8a5d-6d987025dd3a

  Dataset

• 6S Bacterial community sequencing Raw sequence reads

  Phiri, S. (Creator), Schoustra, S. E. (Creator), van den Heuvel, J. (Creator), Smid, E. J. (Creator), Shindano, J. (Creator) & Linnemann, A. (Creator), Wageningen University & Research, 3 Oct 2019

  https://www.ncbi.nlm.nih.gov/bioproject/575741

  Dataset

• Data supporting the analysis of sequencing data for identification of lactic acid bacteria (LAB) and yeast species in traditionally fermented maize ogi, part of the research " Traditional maize ogi production and the assessment of selected species for the development of a starter culture "

  Sanya, C. (Creator), Schoustra, S. (Creator), Ugale, R. (Creator), Madode, Y. (Creator), Wolkers-Rooijackers, J. (Creator), Linnemann, A. (Creator) & Smid, E. (Creator), Wageningen University & Research, 1 May 2025

  DOI: 10.4121/b2cb872d-06c0-4938-8225-a84957efae70

  Dataset

• Gene profiling-based phenotyping for identification of cellular parameters that contribute to fitness, stress-tolerance and virulence of Listeria monocytogenes variants

  Koomen, J. S. (Creator), den Besten, H. M. W. (Creator), Metselaar, K. I. (Creator), Tempelaars, M. H. (Creator), Wijnands, L. M. (Creator), Zwietering, M. H. (Creator) & Abee, T. (Creator), Wageningen University, 9 Nov 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114672

  Dataset

• assessment of Cas9-driven genome editing in presence of DNA oligos in CML cells

  Swartjes, T. (Creator), Shang, P. (Creator), Van Den Berg, D. T. M. (Creator), Künne, T. (Creator), Geijsen, N. (Creator), Brouns, S. J. J. (Creator), van der Oost, J. (Creator), Staals, R. H. J. (Creator) & Notebaart, R. A. (Creator), Wageningen University & Research, 13 Jan 2022

  https://www.ncbi.nlm.nih.gov/bioproject/796802

  Dataset

• Ribosomal mutations enable a switch between high fitness and high stress resistance in Listeria monocytogenes

  Koomen, J. (Creator), Ma, X. (Creator), Bombelli, A. (Creator), Tempelaars, M. H. (Creator), Boeren, S. (Creator), Zwietering, M. H. (Creator), den Besten, H. M. W. (Creator) & Abee, T. (Creator), Wageningen University & Research, 27 Oct 2023

  https://www.ncbi.nlm.nih.gov/bioproject/1032842

  Dataset

• Analysis of germination and outgrowth of sorbic acid-stressed Bacillus cereus ATCC 14579 spores.

  van Melis, C. (Creator), Nierop Groot, M. (Creator), Tempelaars, M. (Creator), Moezelaar, R. (Creator) & Abee, T. (Creator), Wageningen University and Research Centre, 1 Nov 2010

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE19186

  Dataset

• Assessment of CcpA-mediated catabolite control of metabolism and enterotoxin production in Bacillus cereus ATCC 14579

  van der Voort, M. (Creator), Kuipers, O. P. (Creator), Buist, G. (Creator), de Vos, W. (Creator) & Abee, T. (Creator), Wageningen UR, 28 Mar 2008

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7843

  Dataset

• Lactococcus cremoris subsp. cremoris TIFN7 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. C. L. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. J. (Creator), Wageningen University & Research, 19 Aug 2013

  https://www.ncbi.nlm.nih.gov/bioproject/175675

  Dataset

• Lactococcus cremoris subsp. cremoris TIFN6 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. C. L. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. J. (Creator), Wageningen University & Research, 21 Sept 2012

  https://www.ncbi.nlm.nih.gov/bioproject/175674

  Dataset

• Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. C. L. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. J. (Creator), Wageningen University & Research, 19 Aug 2013

  https://www.ncbi.nlm.nih.gov/bioproject/175670

  Dataset

• Monitoring the ethanol stress response of a sigM deletion strain of B. cereus ATCC 14579.

  van der Voort, M. (Creator), Wageningen UR, 11 May 2008

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE9856

  Dataset