Food Microbiology

Search results

• Data underlying the publication: Quantitative physiology and proteomic adaptations of Bifidobacterium breve NRBB57 at near-zero growth rates

  Ortiz Camargo, A. (Creator), van Mastrigt, O. (Creator), Abee, T. (Creator), Smid, E. (Creator) & Ben-Amor, K. (Creator), 6 Feb 2023

  DOI: 10.4121/21960575

  Dataset

• Study of the temporal changes in the bovine udder microbioa of healthy quarters

  Winther, A. R. (Creator), Narvhus, J. A. (Creator), Smistad, M. (Creator), Da Silva Duarte, V. (Creator), Bombelli, A. (Creator) & Porcellato, D. (Creator), Norwegian University of Life Sciences, 5 Jan 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB47169

  Dataset

• SigB modulates expression of novel SigB regulon members via Bc1009 in non-stressed and heat-stressed cells revealing its alternative roles in Bacillus cereus

  Yeak, C. (Creator), Tempelaars, M. (Creator), Wu, J. L. (Creator), Westerveld, W. (Creator), Reder, A. (Creator), Michalik, S. (Creator), Dhople, V. M. (Creator), Völker, U. (Creator), Pané-Farré, J. (Creator), Wells-Bennik, M. H. J. (Creator) & Abee, T. (Creator), Wageningen University, 2 Mar 2023

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE213958

  Dataset

• Genome-wide transcriptional profiling of Clostridium perfringens SM101 during sporulation

  Xiao, Y. (Creator), van Hijum, S. A. (Creator), Abee, T. (Creator) & Wells-Bennik, M. H. (Creator), Wageningen University, 31 Dec 2014

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE59616

  Dataset

• Genome sequence of the rat gut bacterium Romboutsia ilealis CRIB

  Gerritsen, J. (Creator), Timmerman, H. M. (Creator), Fuentes, S. (Creator), van Minnen, L. P. (Creator), Panneman, H. (Creator), Konstantinov, S. R. (Creator), Rombouts, F. M. (Creator), Gooszen, H. G. (Creator), Akkermans, L. M. A. (Creator), Smidt, H. (Creator) & Rijkers, G. T. (Creator), Wageningen University, 31 Mar 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB4727

  Dataset

• Transcriptomic and physiological responses of Bacillus cereus to organic and inorganic acid down-shocks

  Mols, J. M. (Creator), van Kranenburg, R. (Creator), Tempelaars, M. (Creator), van Schaik, W. (Creator), Moezelaar, R. (Creator) & Abee, T. (Creator), Wageningen University, 30 Sept 2009

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE15140

  Dataset

• Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strain ATCC 14579

  Mols, J. M. (Creator), van Kranenburg, R. (Creator), van Melis, C. (Creator), Moezelaar, R. (Creator) & Abee, T. (Creator), Wageningen University, 25 Nov 2009

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13711

  Dataset

• Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strain ATCC 10987

  Mols, J. M. (Creator), van Kranenburg, R. (Creator), van Melis, C. (Creator), Moezelaar, R. (Creator) & Abee, T. (Creator), Wageningen University, 25 Nov 2009

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13729

  Dataset

• Anaerobic induction in B. cereus ATCC 14579

  van der Voort, M. (Creator) & Abee, T. (Creator), Wageningen UR, 11 May 2008

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE9846

  Dataset

• Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987

  Wijman, J. (Creator), Mols, M. (Creator), Tempelaars, M. (Creator) & Abee, T. (Creator), Wageningen UR, 10 Oct 2015

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE24620

  Dataset

• Monitoring the ethanol stress response of a sigM deletion strain of B. cereus ATCC 14579.

  van der Voort, M. (Creator), Wageningen UR, 11 May 2008

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE9856

  Dataset

• Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus

  Wijman, J. G. E. (Creator), Wageningen UR, 10 Oct 2015

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE24635

  Dataset

• Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. (Creator), Wageningen University & Research, 19 Aug 2013

  https://www.ncbi.nlm.nih.gov/bioproject/175670

  Dataset

• Lactococcus cremoris subsp. cremoris TIFN6 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. (Creator), Wageningen University & Research, 21 Sept 2012

  https://www.ncbi.nlm.nih.gov/bioproject/175674

  Dataset

• Lactococcus cremoris subsp. cremoris TIFN5 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. (Creator), Wageningen University & Research, 19 Aug 2013

  https://www.ncbi.nlm.nih.gov/bioproject/175673

  Dataset

• Lactococcus cremoris subsp. cremoris TIFN1 Genome sequencing and assembly

  Erkus, O. (Creator), de Jager, V. (Creator), Spus, M. (Creator), van Alen-Boerrigter, I. J. (Creator), van Rijswijck, I. M. H. (Creator), Hazelwood, L. (Creator), Janssen, P. W. (Creator), van Hijum, S. A. F. T. (Creator), Kleerebezem, M. (Creator) & Smid, E. (Creator), Wageningen University & Research, 19 Aug 2013

  https://www.ncbi.nlm.nih.gov/bioproject/175624

  Dataset

• Ethanol stress response in Lactobacillus plantarum WCFS1

  van Bokhorst-van de Veen, H. (Creator), Rojo-Bezares, B. (Creator), Bongers, R. S. (Creator), Tempelaars, M. (Creator), Molenaar, D. (Creator), Marco, M. (Creator), Abee, T. (Creator) & Kleerebezem, M. (Creator), NIZO, 1 Jan 2010

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE17847

  Dataset

• Batch wt vs hyper +_- pABA Normal int_Filtered fg-bg2

  Mars, A. (Creator), Faijes, M. (Creator), Molenaar, D. (Creator), de Vos, R. C. (Creator), Klaus, S. M. (Creator), Hanson, A. D. (Creator), de Vos, W. (Creator) & Smid, E. (Creator), NIZO, 31 May 2008

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE8956

  Dataset

• Bacteria 16S ribosomal RNA gene, partial sequence

  van den Bogert, B. (Creator), Erkus, O. (Creator), te Boekhorst, J. (Creator), Goffau, M. (Creator), Smid, E. (Creator), Zoetendal, E. (Creator) & Kleerebezem, M. (Creator), Wageningen University & Research, 21 Aug 2013

  https://www.ncbi.nlm.nih.gov/popset/409712351

  Dataset

• Bacillus subtilis group type II DNA gyrase subunit A gene, partial cds

  Líma, L. J. R. (Creator), van der Velpen, V. (Creator), Wolkers-Rooijackers, J. (Creator), Kamphuis, H. J. (Creator), Zwietering, M. (Creator) & Nout, M. J. R. (Creator), Wageningen University & Research, 29 Mar 2012

  https://www.ncbi.nlm.nih.gov/popset/378406282

  Dataset

• Bacillaceae 16S ribosomal RNA gene, partial sequence

  Líma, L. J. R. (Creator), Kamphuis, H. J. (Creator), Nout, M. J. R. (Creator) & Zwietering, M. (Creator), Wageningen University & Research, 7 May 2011

  https://www.ncbi.nlm.nih.gov/popset/298569375

  Dataset

• Bacillus subtilis subsp. subtilis strain:M1 Genome sequencing and assembly

  Líma, L. J. R. (Creator), Kamphuis, H. J. (Creator), Nout, M. J. R. (Creator) & Zwietering, M. (Creator), Wageningen University & Research, 16 May 2017

  https://www.ncbi.nlm.nih.gov/bioproject/238340

  Dataset

• Bacillus subtilis subsp. subtilis strain:M112 Genome sequencing and assembly

  Líma, L. J. R. (Creator), Kamphuis, H. J. (Creator), Nout, M. J. R. (Creator) & Zwietering, M. (Creator), Wageningen University & Research, 16 May 2017

  https://www.ncbi.nlm.nih.gov/bioproject/238336

  Dataset

• Lactiplantibacillus plantarum strain:Lp900 Genome sequencing and assembly

  Führen, J. (Creator), Nijland, R. (Creator), Wels, M. (Creator), Boekhorst, J. (Creator) & Kleerebezem, M. (Creator), Wageningen University & Research, 16 Feb 2021

  https://www.ncbi.nlm.nih.gov/bioproject/630372

  Dataset

• Gene profiling-based phenotyping for identification of cellular parameters that contribute to fitness, stress-tolerance and virulence of Listeria monocytogenes variants

  Koomen, J. (Creator), den Besten, H. (Creator), Metselaar, K. I. (Creator), Tempelaars, M. (Creator), Wijnands, L. M. (Creator), Zwietering, M. (Creator) & Abee, T. (Creator), Wageningen University, 9 Nov 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114672

  Dataset