Research output per year
Research output per year
- 1 - 50 out of 11,554 results
Search results
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2025
Characterizing the extractable proteins from tomato leaves – A proteomics study
Kleuter, M., Yu, Y., Verdegaal, L., Pancaldi, F., America, A. H. P., van der Goot, A. J. & Trindade, L. M., Jan 2025, In: Food Chemistry: X. 25, 10 p., 102114.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Confirmation and characterisation of ALS inhibitor resistant Poa trivialis from Ireland
Vijayarajan, V. B. A., Torra, J., Runge, F., de Jong, H., van de Belt, J., Hennessy, M. & Forristal, P. D., Mar 2025, In: Pesticide Biochemistry and Physiology. 208, 7 p., 106266.Research output: Contribution to journal › Article › Academic › peer-review
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Cover crop rotation suppresses root-knot nematode infection by shaping soil microbiota
Zhang, H., Guo, D., Lei, Y., Lozano-Torres, J. L., Deng, Y., Xu, J. & Hu, L., 2025, In: New Phytologist. 245, 1, p. 363-377 15 p.Research output: Contribution to journal › Article › Academic › peer-review
1 Citation (Scopus) -
Destabilized bacterial and fungal network weakens soil multifunctionality under increasing grazing stress
Li, S., Zhang, B., Li, Y., Zhao, T., Zheng, J., Qiao, J., Zhang, F., Han, G., Bisseling, T. & Zhao, M., Feb 2025, In: Applied Soil Ecology. 206, 12 p., 105827.Research output: Contribution to journal › Article › Academic › peer-review
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Differential effect of acute versus persistent insect-specific flavivirus infection on superinfection exclusion of West Nile, Zika and chikungunya viruses in RNAi-competent and -deficient mosquito cells
Willemsen, W., Helmes, N., Overheul, G. J., Henkens, M., Spruijt, R., van Rij, R. P., van Oers, M. M., Pijlman, G. P. & Fros, J. J., Jun 2025, In: One Health. 20, 11 p., 100960.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Distribution of bacterial DNA repair proteins and their co-occurrence with immune systems
Mutte, S. K., Barendse, P., Ugarte, P. B. & Swarts, D. C., 28 Jan 2025, In: Cell Reports. 44, 1, 17 p., 115110.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Evolution and ecology of anti-defence systems in phages and plasmids
Niault, T., van Houte, S., Westra, E. & Swarts, D. C., 6 Jan 2025, In: Current Biology. 35, 1, p. R32-R44Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Exploring intra- and intergenomic variation in haplotype-resolved pangenomes
Jonkheer, E. M., de Ridder, D., van der Lee, T. A. J., de Haan, J. R., Berke, L. & Smit, S., 5 Jan 2025, (E-pub ahead of print) In: Plant Biotechnology Journal. 13 p.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
From fibers to flowering to metabolites: unlocking hemp (Cannabis sativa) potential with the guidance of novel discoveries and tools
Pancaldi, F., Salentijn, E. M. J. & Trindade, L. M., 2025, In: Journal of Experimental Botany. 76, 1, p. 109-123Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Immune signaling: receptor-like proteins make the difference
Huang, W. R. H. & Joosten, M. H. A. J., 2025, In: Trends in Plant Science. 30, 1, p. 54-68Research output: Contribution to journal › Article › Academic › peer-review
Open Access9 Citations (Scopus) -
Increased diversification of crop rotation systems induces plant-beneficial rhizobiomes to facilitate crop performance
Hu, S., Shao, Q., Chen, Y., Kammenga, J. & Geisen, S., Jan 2025, In: Applied Soil Ecology. 205, 105758.Research output: Contribution to journal › Article › Academic › peer-review
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Manure odor profiling for flock-level monitoring on commercial layer pullet farms: Vaccination events as a model stressor
van Veen, L. A., van den Brand, H., van den Oever, A. C. M., Kemp, B. & Meisenburg, M., Feb 2025, In: Poultry Science. 104, 2, 10 p., 104681.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
On the diversity of nematode antagonists in an agricultural soil, and their steerability by root-knot nematode density and cover crops
Cazzaniga, S. G., Belliard, P., van Steenbrugge, J., van den Elsen, S., Lombaers, C., Visser, J., Molendijk, L., Macia-Vicente, J. G., Postma, J., Mommer, L. & Helder, J., Mar 2025, In: Soil Biology and Biochemistry. 202, 109693.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Prone to loss: Senescence-regulated protein degradation leads to lower protein extractability in aging tomato leaves
Kleuter, M., Yu, Y., Pancaldi, F., van der Goot, A. J. & Trindade, L. M., Jan 2025, In: Plant Science. 350, 112284.Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus) -
Soybean breeders can count on nodules
Shen, D. & Bisseling, T., 2025, In: Trends in Plant Science. 30, 1, p. 10-12 3 p.Research output: Contribution to journal › Short survey › peer-review
Open Access1 Citation (Scopus) -
Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
Pakkir Shah, A. K., Walter, A., Ottosson, F., Russo, F., Navarro-Diaz, M., Boldt, J., Kalinski, J. C. J., Kontou, E. E., Elofson, J., Polyzois, A., González-Marín, C., Farrell, S., Aggerbeck, M. R., Pruksatrakul, T., Chan, N., Wang, Y., Pöchhacker, M., Brungs, C., Cámara, B. & Caraballo-Rodríguez, A. M. & 37 others, , 2025, In: Nature protocols. 20, 1, p. 92-162Research output: Contribution to journal › Article › Academic › peer-review
2 Citations (Scopus) -
StCDF1: A ‘jack of all trades’ clock output with a central role in regulating potato nitrate reduction activity
Shaikh, M. A., Ramírez-Gonzales, L., Franco-Zorrilla, J. M., Steiner, E., Oortwijn, M., Bachem, C. W. B. & Prat, S., 2025, In: New Phytologist. 245, 1, p. 282-298 17 p.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Structural complexity of the white flower locus in Chrysanthemum
Qin, D., Toyokura, K., Nakano, M., Abe, T., Higuchi, Y., Arens, P., Taniguchi, K., Shibata, M. & Kusaba, M., 2025, In: Journal of Horticultural Science and Biotechnology. 100, 1, p. 82-91Research output: Contribution to journal › Article › Academic › peer-review
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The parasitoid Cotesia glomerata responds differently to plant volatile emission induced by parasitized caterpillars
Cuny, M. A. C. & Poelman, E. H., 2025, In: Animal Behaviour. 219, p. 123007 9 p., 123007.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Unravelling the different components of nonphotochemical quenching using a novel analytical pipeline
Ramakers, L. A. I., Harbinson, J., Wientjes, E. & van Amerongen, H., 2025, In: New Phytologist. 245, 2, p. 625-636 12 p.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
2024
A butterfly egg-killing hypersensitive response in Brassica nigra is controlled by a single locus, PEK, containing a cluster of TIR-NBS-LRR receptor genes
Bassetti, N., Caarls, L., Bouwmeester, K., Verbaarschot, P., van Eijden, E., Zwaan, B., Bonnema, G., Schranz, E. & Fatouros, N., Apr 2024, In: Plant, Cell & Environment. 47, 4, p. 1009-1022Research output: Contribution to journal › Article › Academic › peer-review
Open Access3 Citations (Scopus) -
A catalogue of recombination coldspots in interspecific tomato hybrids
Fuentes, R. R., Nieuwenhuis, R., Chouaref, J., Hesselink, T., van Dooijeweert, W., van den Broeck, H. C., Schijlen, E., Schouten, H. J., Bai, Y., Fransz, P., Stam, M., de Jong, H., Trivino, S. D., de Ridder, D., van Dijk, A. D. J. & Peters, S. A., 1 Jul 2024, In: Plos Genetics. 20, 22 p., e1011336.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Accessory chromosomes and effectors in Fusarium spp. infecting banana
Dijkstra, J., Feb 2024, In: Gewasbescherming. 55, 1, p. 21-21Research output: Contribution to journal › Article › Professional
Open Access -
A chromosome-level genome assembly of Zasmidium syzygii isolated from banana leaves
van Westerhoven, A., Mehrabi, R., Talebi, R., Steentjes, M., Corcolon, B., Chong, P., Kema, G. & Seidl, M., 6 Mar 2024, In: G3: Genes, Genomes, Genetics. 14, 3, jkad262.Research output: Contribution to journal › Article › Academic › peer-review
Open Access2 Citations (Scopus) -
A commitment for life: Decades of unraveling the molecular mechanisms behind seed dormancy and germination
Sajeev, N., Koornneef, M. & Bentsink, L., 2024, In: The Plant Cell. 36, 5, p. 1358-1376 koad328.Research output: Contribution to journal › Article › Academic › peer-review
Open Access22 Citations (Scopus) -
A complete chromosome substitution mapping panel reveals genome-wide epistasis in Arabidopsis
Wijnen, C. L., Botet, R., van de Belt, J., Deurhof, L., de Jong, H., de Snoo, C. B., Dirks, R., Boer, M. P., van Eeuwijk, F. A., Wijnker, E. & Keurentjes, J. J. B., 2024, In: Heredity. 133, 3, p. 198-205Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
A coordinated switch in sucrose and callose metabolism enables enhanced symplastic unloading in potato tubers
Van Den Herik, B., Bergonzi, S., Li, Y., Bachem, C. W. & Ten Tusscher, K. H., 17 Apr 2024, In: Quantitative Plant Biology. 5, e4.Research output: Contribution to journal › Article › Academic › peer-review
Open Access2 Citations (Scopus) -
Adaptation of Fusarium Head Blight Pathogens to Changes in Agricultural Practices and Human Migration
Yang, M., Smit, S., de Ridder, D., Feng, J., Liu, T., Xu, J., van der Lee, T. A. J., Zhang, H. & Chen, W., 5 Aug 2024, (E-pub ahead of print) In: Advanced Science. 2401899.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Adaptations to water gradient in three Rorippa plant species correspond with plant resistance against insect herbivory under drought and waterlogged conditions
Kamps, B. B. J. & Poelman, E. H., Feb 2024, In: Ecological Entomology. 49, 1, p. 1-9Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Addressing spatiotemporal signal variations in pair correlation function analysis
Khandan, V., Boerkamp, V. J. P., Chiechi, R. C., Hohlbein, J. & Mathwig, K., 8 Aug 2024, (E-pub ahead of print) In: Biophysical Journal.Research output: Contribution to journal › Article › Academic › peer-review
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Advancing Fluorescence Correlation Spectroscopy (FCS): Tackling Spatiotemporal Variations in Emitter Distribution
Khandan, V., Boerkamp, V., Mathwig, K. & Hohlbein, J., 11 Apr 2024Research output: Non-textual form › Software
Open Access -
Aerial mapping of the Peruvian Chira Valley banana production system to monitor the expansion of Fusarium wilt caused by Tropical Race 4
Nakasato Tagami, G., van Westerhoven, A., Seidl, M., van der Sluis, J., Cozzarelli, M., Balarezo, D., Pflücker, R., Marquez Rosillo, C., Clercx, L. & Kema, G., 2024, In: PhytoFrontiers™. 4, 2, p. 196-204Research output: Contribution to journal › Abstract › Academic
Open Access -
A full-length SSU rRNA-based workflow for high-resolution monitoring of nematode communities reveals direct and indirect responses to plant-based manipulations
van Himbeeck, R., Cazzaniga, S., van den Elsen, S., Oude Vrielink, J., Aslan, S., Visser, J. & Helder, J., Feb 2024, In: Soil Biology and Biochemistry. 189, 12 p., 109263.Research output: Contribution to journal › Article › Academic › peer-review
Open Access4 Citations (Scopus) -
A generic pipeline for CADD Score generation: chickenCADD and turkeyCADD
Lensing, K., van Schipstal, J. G. C., de Ridder, D., Groenen, M. A. M. & Derks, M. F. L., 3 Nov 2024, BioRxiv.Research output: Working paper › Preprint
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A getah virus-like-particle vaccine provides complete protection from viremia and arthritis in wild-type mice
Miao, Q., Nguyen, W., Zhu, J., Liu, G., van Oers, M. M., Tang, B., Yan, K., Larcher, T., Suhrbier, A. & Pijlman, G. P., 2024, In: Vaccine. 42, 25, p. 126136 126136.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Aging later but faster: how StCDF1 regulates senescence in Solanum tuberosum
Shi, L., de Biolley, L., Shaikh, M. A., de Vries, M. E., Mittmann, S. U., Visser, R. G. F., Prat, S. & Bachem, C. W. B., 2024, In: New Phytologist. 242, 6, p. 2541-2554Research output: Contribution to journal › Article › Academic › peer-review
Open Access6 Citations (Scopus) -
Allelic variants confer Arabidopsis adaptation to small regional environmental differences
Wijfjes, R. Y., Boesten, R., Becker, F. F. M., Theeuwen, T. P. J. M., Snoek, B. L., Mastoraki, M., Verheijen, J. J., Güvencli, N., Denkers, L. A. M., Koornneef, M., van Eeuwijk, F. A., Smit, S., de Ridder, D. & Aarts, M. G. M., 2024, In: Plant Journal. 120, 4, p. 1662-1681Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Allelic variation in the autotetraploid potato: genes involved in starch and steroidal glycoalkaloid metabolism as a case study
Li, H., Brouwer, M., Pup, E. D., van Lieshout, N., Finkers, R., Bachem, C. W. B. & Visser, R. G. F., 12 Mar 2024, In: BMC Genomics. 25, 274.Research output: Contribution to journal › Article › Academic › peer-review
Open Access2 Citations (Scopus) -
A low-cost open-source imaging platform reveals spatiotemporal insight into leaf elongation and movement
Oskam, L., Snoek, B. L., Pantazopoulou, C. K., van Veen, H., Matton, S. E. A., Dijkhuizen, R. & Pierik, R., 2024, In: Plant Physiology. 195, 3, p. 1866-1879 kiae097.Research output: Contribution to journal › Article › Academic › peer-review
Open Access2 Citations (Scopus) -
A LysM Effector Mediates Adhesion and Plant Immunity Suppression in the Necrotrophic Fungus Botrytis cinerea
Crumière, M., de Vallée, A., Rascle, C., Gillet, F. X., Nahar, S., van Kan, J. A. L., Bruel, C., Poussereau, N. & Choquer, M., 10 Dec 2024, (E-pub ahead of print) In: Journal of Basic Microbiology. 14 p., e2400552.Research output: Contribution to journal › Article › Academic › peer-review
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A matter of perspective: Root adaptive responses to endoparasitic cystnematodes
Guarneri, N., 20 Mar 2024, Wageningen: Wageningen University. 160 p.Research output: Thesis › internal PhD, WU
Open Access -
A multifaceted kinase axis regulates plant organ abscission through conserved signaling mechanisms
Galindo-Trigo, S., Khandare, V., Roosjen, M., Adams, J., Wangler, A. M., Bayer, M., Borst, J. W., Smakowska-Luzan, E. & Butenko, M. A., 8 Jul 2024, In: Current Biology. 34, 13, p. 3020-3030.e7Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Analysis of ABA and Fructan Contents during Onion (Allium cepa L.) Storage in the Search for Internal Sprouting Indicators
Crucitti, A., Kohlen, W., Dechesne, A., van Seters, A., Bachem, C. W. B., Immink, R. G. H. & Scholten, O. E., Sept 2024, In: Horticulturae. 10, 9, 975.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Analysis of auxin responses in the fern Ceratopteris richardii identifies the developmental phase as a major determinant for response properties
Woudenberg, S., Alvarez, M. D., Rienstra, J., Levitsky, V., Mironova, V., Scarpella, E., Kuhn, A. & Weijers, D., 15 Oct 2024, In: Development (Cambridge, England). 151, 20Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus) -
A natural insertion in melon’s MLO1 gene homologue leads to partial resistance to powdery mildew
Siskos, L., Riado, J., Enciso, M., Peters, S., Nieuwenhuis, R., Esselink, D., Visser, R. G. F., Schouten, H. J. & Bai, Y., 2024, In: Acta Horticulturae. 1411, p. 275-286Research output: Contribution to journal › Article › Academic › peer-review
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Ancestry, evolution and interactors of NIN, a key regulator of root nodule symbiosis: A key regulator of root nodule symbiosis
Yan, S., 16 Dec 2024, Wageningen: Wageningen University. 152 p.Research output: Thesis › internal PhD, WU
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A new sub-class linear discriminant for miniature spectrometer based food analysis
Nibouche, O., Asharindavida, F., Wang, H., Vincent, J., Liu, J., van Ruth, S., Maguire, P. & Rahman, E., 15 Jul 2024, In: Chemometrics and Intelligent Laboratory Systems. 250, 105136.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
An open-source controller to build a dynamic light intensity setup
Caracciolo, L., Philippi, J., Theeuwen, T. P. J. M., van Amerongen, H. & Harbinson, J., 28 Feb 2024, In: Plant Methods. 20, 1, 35.Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus) -
Apple ground color QTL discovery and characterization in a multi-family population
Vanderzande, S. & van de Weg, E., Oct 2024, In: Acta Horticulturae. 1412, p. 175-182Research output: Contribution to journal › Article › Academic › peer-review
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Appreciating animal induced pluripotent stem cells to shape plant cell reprogramming strategies
Wittmer, J. & Heidstra, R., 23 Jul 2024, In: Journal of Experimental Botany. 75, 14, p. 4373-4393 21 p.Research output: Contribution to journal › Article › Academic › peer-review
Open Access2 Citations (Scopus)