Research Output 1924 2020

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Letter
2020

Mass spectrometry searches using MASST

Wang, M., Jarmusch, A. K., Vargas, F., Aksenov, A. A., Gauglitz, J. M., Weldon, K., Petras, D., da Silva, R., Quinn, R., Melnik, A. V., van der Hooft, J. J. J., Caraballo-Rodríguez, A. M., Nothias, L. F., Aceves, C. M., Panitchpakdi, M., Brown, E., Di Ottavio, F., Sikora, N., Elijah, E. O., Labarta-Bajo, L. & 16 others, Gentry, E. C., Shalapour, S., Kyle, K. E., Puckett, S. P., Watrous, J. D., Carpenter, C. S., Bouslimani, A., Ernst, M., Swafford, A. D., Zúñiga, E. I., Balunas, M. J., Klassen, J. L., Loomba, R., Knight, R., Bandeira, N. & Dorrestein, P. C., 1 Jan 2020, In : Nature Biotechnology. 38, p. 23-26 4 p.

Research output: Contribution to journalLetterAcademicpeer-review

2019
8 Citations (Scopus)

Amazonian rainforest tree mortality driven by climate and functional traits

Aleixo, I., Norris, D., Hemerik, L., Barbosa, A., Prata, E., Costa, F. & Poorter, L., 22 Apr 2019, In : Nature Climate Change. 9, 5, p. 384-388 5 p.

Research output: Contribution to journalLetterAcademicpeer-review

rainforest
mortality
climate
carbon sequestration
tropical forest

Genomic prediction of maize yield across European environmental conditions

Millet, E. J., Kruijer, W., Coupel-Ledru, A., Alvarez Prado, S., Cabrera-Bosquet, L., Lacube, S., Charcosset, A., Welcker, C., van Eeuwijk, F. & Tardieu, F., 20 May 2019, In : Nature Genetics. 51, p. 952-956

Research output: Contribution to journalLetterAcademicpeer-review

Zea mays
Genotype
Benchmarking
Climate
Genome

Increased threat of urban malaria from anopheles stephensi mosquitoes, africa

Takken, W. & Lindsay, S., 1 Jul 2019, In : Emerging Infectious Diseases. 25, 7, p. 1431-1433 3 p.

Research output: Contribution to journalLetterAcademicpeer-review

Anopheles
Culicidae
Malaria
Djibouti
Ethiopia
4 Citations (Scopus)

Single introductions of soil biota and plants generate long-term legacies in soil and plant community assembly

Wubs, E. R. J., van der Putten, W. H., Mortimer, S. R., Korthals, G. W., Duyts, H., Wagenaar, R. & Bezemer, M., Jul 2019, In : Ecology Letters. 22, 7, p. 1145-1151

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
soil biota
community composition
plant community
plant communities
Spermatophytina
7 Citations (Scopus)

Trends in Azole resistance in Aspergillus fumigatus, The Netherlands, 1994–2016

Buil, J. B., Snelders, E., Denardi, L. B., Melchers, W. J. G. & Verweij, P. E., 1 Jan 2019, In : Emerging Infectious Diseases. 25, 1, p. 176-178

Research output: Contribution to journalLetterAcademicpeer-review

Azoles
Aspergillus fumigatus
Tertiary Care Centers
Netherlands

Validating the demethylating effects of 5-aza-20-deoxycytidine in insects requires a whole-genome approach (A reply to Ellers et al.)

Cook, N., Parker, D. J., Tauber, E., Pannebakker, B. A. & Shuker, D. M., 11 Jul 2019, In : American Naturalist. 194, 3, p. 432-438

Research output: Contribution to journalLetterAcademicpeer-review

sex ratio
genome
insect
insects
Nasonia vitripennis
2018
1 Citation (Scopus)
Open Access

First report of Boeremia exigua var. Exigua causing stem and leaf spot on common speedwell in Switzerland

Michel, V. V., Daepp, M., Woudenberg, J. H. C., de Gruyter, J. & de Wit, P. J. G. M., 1 Feb 2018, In : Plant Disease. 102, 2, p. 440-440

Research output: Contribution to journalLetterAcademic

Open Access
1 Citation (Scopus)

Letter: Integrated approach to malaria control

Koenraadt, C. J. M. & Takken, W., 2 Feb 2018, In : Science. 359, 6375, p. 528-529

Research output: Contribution to journalLetterAcademic

11 Citations (Scopus)

Parasitic wasp-associated symbiont affects plant-mediated species interactions between herbivores

Cusumano, A., Zhu, F., Volkoff, A. N., Verbaarschot, P., Bloem, J., Vogel, H., Dicke, M. & Poelman, E. H., 1 Jul 2018, In : Ecology Letters. 21, 7, p. 957-967

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
venom
symbiont
wasp
symbionts
trophic level
114 Citations (Scopus)

Structure and function of the global topsoil microbiome

Bahram, M., Hildebrand, F., Forslund, S. K., Anderson, J. L., Soudzilovskaia, N. A., Bodegom, P. M., Bengtsson-Palme, J., Anslan, S., Coelho, L. P., Harend, H., Huerta-Cepas, J., Medema, M. H., Maltz, M. R., Mundra, S., Olsson, P. A., Pent, M., Põlme, S., Sunagawa, S., Ryberg, M., Tedersoo, L. & 1 others, Bork, P., 1 Aug 2018, In : Nature. 560, 7717, p. 233-237

Research output: Contribution to journalLetterAcademicpeer-review

topsoil
gene
nutrient cycling
soil
antibiotic resistance
2017
4 Citations (Scopus)

Automated assembly of species metabolomes through data submission into a public repository

Salek, R., Conesa, P., Cochrane, K., Haug, K., Williams, M., Kale, N., Moreno, P., Jayaseelan, K. V., Macias, J. R., Nainala, V. C., Hall, R. D., Reed, L., Viant, M., Donovan, C. & Steinbeck, C., 1 Aug 2017, In : GigaScience. 6, 8, 4 p., gix062.

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
Metabolomics
Metabolome
Databases
Bioinformatics
Computational Biology
17 Citations (Scopus)

Combined effects of agrochemicals and ecosystem services on crop yield across Europe

Gagic, V., Kleijn, D., Báldi, A., Boros, G., Jørgensen, H. B., Elek, Z., Garratt, M. P. D., de Groot, A., Hedlund, K., Kovács-Hostyánszki, A., Marini, L., Martin, E. A., Pevere, I., Potts, S. G., Redlich, S., Senapathi, D., Steffan-Dewenter, I., Świtek, S., Smith, H. G., Takács, V. & 4 others, Tryjanowski, P., van der Putten, W. H., van Gils, S. & Bommarco, R., Nov 2017, In : Ecology Letters. 20, 11, p. 1427-1436

Research output: Contribution to journalLetterAcademicpeer-review

agrochemical
agrochemicals
ecosystem service
crop yield
ecosystem services
2 Citations (Scopus)

Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels

Zandberg, L., Gort, G., van Oers, K. & Hinde, C. A., 2017, In : Ecology Letters. 20, 10, p. 1306-1314

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
mate choice
mating behavior
heterozygosity
fitness
sexual selection
9 Citations (Scopus)

Gap assessment in current soil monitoring networks across Europe for measuring soil functions

Van Leeuwen, J. P., Saby, N. P. A., Jones, A., Louwagie, G., Micheli, E., Rutgers, M., Schulte, R. P. O., Spiegel, H., Toth, G. & Creamer, R. E., 12 Dec 2017, In : Environmental Research Letters. 12, 12, 124007.

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
Soil
Soils
Monitoring
soil
Soil surveys

KNAW en de wetenschap: Toon meer zelfkritiek

van Gils, S. H., 2017, In : NRC.

Research output: Contribution to journalLetterPopular

4 Citations (Scopus)

Letter to the editor: Elevating the conversation about GE crops

Gould, F., Amasino, R. M., Brossard, D., Buell, C. R., DIxon, R. A., Falck-Zepeda, J. B., Gallo, M. A., Giller, K. E., Glenna, L. L., Griffin, T., Hamaker, B. R., Kareiva, P. M., Magraw, D., Mallory-Smith, C., Pixley, K. V., Ransom, E. P., Rodemeyer, M., Stelly, D. M., Stewart, C. N. & Whitaker, R. J., 2017, In : Nature Biotechnology. 35, 4, p. 302-304

Research output: Contribution to journalLetterAcademic

14 Citations (Scopus)

Nested achetypes of vulnerability in African drylands: where lies potential for sustainable Agricultural intensification?

Sietz, D., Ordonez, J. C., Kok, M. T. J., Janssen, P., Hilderink, H. B. M., Tittonell, P. A. & van Dijk, J. W. M., 2017, In : Environmental Research Letters. 12, 9, 095006.

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
agricultural intensification
Africa South of the Sahara
vulnerability
Food Supply
Erosion
11 Citations (Scopus)

Soil handling methods should be selected based on research questions and goals

Gundale, M. J., Wardle, D. A., Kardol, P., Van Der Putten, W. H. & Lucas, R. W., 1 Oct 2017, In : New Phytologist. 216, 1, p. 18-23

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
Soil
Biota
Research
soil
uncertainty
5 Citations (Scopus)

Trends in tropical tree growth: re-analyses confirm earlier findings

van der Sleen, P., Groenendijk, P., Vlam, M., Anten, N. P. R., Bongers, F. & Zuidema, P. A., 2017, In : Global Change Biology. 23, 5, p. 1761-1762

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
tree ring
regeneration
trend
effect
method
2016
252 Citations (Scopus)

Quantifying global soil carbon losses in response to warming

Crowther, T. W., Todd-Brown, K. E. O., Rowe, C. W., Wieder, W. R., Carey, J. C., Machmuller, M. B., Snoek, B. L., Fang, S., Zhou, G., Allison, S. D., Blair, J. M., Bridgham, S. D., Burton, A. J., Carrillo, Y., Reich, P. B., Clark, J. S., Classen, A. T., Dijkstra, F. A., Elberling, B., Emmett, B. A. & 30 others, Estiarte, M., Frey, S. D., Guo, J., Harte, J., Jiang, L., Johnson, B. R., Kröel-Dulay, G., Larsen, K. S., Laudon, H., Lavallee, J. M., Luo, Y., Lupascu, M., Ma, L. N., Marhan, S., Michelsen, A., Mohan, J., Niu, S., Pendall, E., Peñuelas, J., Pfeifer-Meister, L., Poll, C., Reinsch, S., Reynolds, L. L., Schmidt, I. K., Sistla, S., Sokol, N. W., Templer, P. H., Treseder, K. K., Welker, J. M. & Bradford, M. A., 2016, In : Nature. 540, 7631, p. 104-108

Research output: Contribution to journalLetterAcademicpeer-review

soil carbon
warming
carbon
soil horizon
loss
104 Citations (Scopus)

Soil inoculation steers restoration of terrestrial ecosystems

Wubs, E. R. J., van der Putten, W. H., Bosch, M. & Bezemer, T. M., 2016, In : Nature Plants. 2, 16107.

Research output: Contribution to journalLetterAcademicpeer-review

soil inoculation
inoculum
soil
topsoil
ecosystems
2014
1 Citation (Scopus)

A new name for Gloriosa grandiflora (Colchicaceae) from the Democratic Republic of Congo (Kinshasa)

Maroyi, A. & van der Maesen, L. J. G., 2014, In : Phytotaxa. 183, 2, p. 119-119

Research output: Contribution to journalLetterAcademicpeer-review

Gloriosa
Colchicaceae
Democratic Republic of the Congo
nomen novum
new combination
22 Citations (Scopus)

Human Exposure to Tickborne Relapsing Fever Spirochete Borrelia miyamotoi, the Netherlands

Fonville, M., Friesema, I. H. M., Hengeveld, P. D., Docters van Leeuwen, A., Jahfari, S., Harms, M. G., van Vliet, A. J. H., Hofhuis, A., van Pelt, W., Sprong, H. & van den Wijngaard, C. C., 2014, In : Emerging Infectious Diseases. 20, 7, p. 1244-1246

Research output: Contribution to journalLetterAcademicpeer-review

Open Access

Letter to the editor: Reply to SN Thornton and P Lacolley

Hendriksen, M. A. H., Geleijnse, J. M., Boshuizen, H. C. & van Raaij, J. M. A., 2014, In : American Journal of Clinical Nutrition. 100, 1, p. 298-299

Research output: Contribution to journalLetterAcademic

9 Citations (Scopus)

Plant metabolomics is not ripe for environmental risk assessment

Hall, R. D. & de Maagd, R. A., 2014, In : Trends in Biotechnology. 32, 8, p. 391-392

Research output: Contribution to journalLetterAcademicpeer-review

Metabolomics
Risk assessment
Genetically Modified Plants
Metabolites
Technology

Response to Sommer et al. (2014) Fertiliser use is not required as a fourth principle to define conservation agriculture

Vanlauwe, B., Wendt, J., Giller, K. E., Corbeels, M. & Gerard, B., 2014, In : Field Crops Research. 167, p. 159-159

Research output: Contribution to journalLetterAcademicpeer-review

2013
169 Citations (Scopus)

Species richness declines and biotic homogenisation have slowed down for NW-European pollinators and plants.

Carvalheiro, L. G., Kunin, W. E., Keil, P., Aguirre-Gutiérrez, J., Ellis, W. N., Fox, R., Groom, Q., Hennekens, S., Van Landuyt, W., Maes, D., Van de Meutter, F., Michez, D., Rasmont, P., Ode, B., Potts, S. G., Reemer, M., Roberts, S. P. M., Schaminée, J., Wallis de Vries, M. F. & Biesmeijer, J. C., 2013, In : Ecology Letters. 16, 7, p. 870-878

Research output: Contribution to journalLetterAcademicpeer-review

pollinating insects
homogenization
pollinator
habitat destruction
Netherlands
2012
1 Citation (Scopus)

Characterization of a spore-specific protein of the Bacillus cereus group

From, C., van der Voort, M., Abee, T. & Granum, P. E., 2012, In : FEMS Microbiology Letters. 331, 2, p. 152-159

Research output: Contribution to journalLetterAcademicpeer-review

Bacillus cereus
Spores
Proteins
Regulon
Capsid Proteins
3 Citations (Scopus)

Conservation: No silver bullets for African soil problems

Giller, K. E., 2012, In : Nature. 485, 7396, p. 41-41

Research output: Contribution to journalLetterAcademic

12 Citations (Scopus)

Correspondence: Uncertainty in thermal tolerances and climatic debt

Devictor, V., van Swaay, C., Brereton, T., Brotons, L., Chamberlain, D., Heliölä, J., Herrando, S., Julliard, R., Kuussaari, M., Lindström, A., Reif, J., Roy, D. B., Schweiger, O., Settele, J., Stefanescu, C., van Strien, A., van Turnhout, C., Vermouzek, Z., Wallis de Vries, M. F., Wynhoff, I. & 1 others, Jiguet, F., 2012, In : Nature Climate Change. 2, p. 638-639

Research output: Contribution to journalLetterAcademicpeer-review

1 Citation (Scopus)

Reply to Barlow et al. (2011): Towards an integrated understanding of the pre-conquest human footprint in Amazonia

Braga Junqueira, A. & Clement, C. R., 2012, In : Biological Conservation. 152, p. 291-292

Research output: Contribution to journalLetterAcademic

2011
126 Citations (Scopus)

Correspondence - Non-natives: 141 scientists object

Simberloff, D., Alexander, J., Allendorf, F. & van der Putten, W. H., 2011, In : Nature. 475, 7354, p. 36-36

Research output: Contribution to journalLetterAcademic

1 Citation (Scopus)

DDT Paradox: Bouwman et al. Respond

Bouwman, H., van den Berg, H. & Kylin, H., 2011, In : Environmental Health Perspectives. 119, 10, p. A424-A425

Research output: Contribution to journalLetterAcademic

Open Access
2 Citations (Scopus)

Idiosyncrasy in ecology - What's in a word?

Hol, W. H. G., Meyer, K. M. & van der Putten, W. H., 2011, In : Frontiers in Ecology and the Environment. 9, 8, p. 431-433

Research output: Contribution to journalLetterAcademicpeer-review

83 Citations (Scopus)

Letter to the editor: Big data, but are we ready?

Trelles, O., Prins, J. C. P., Snir, M. & Jansen, R. C., 2011, In : Nature Reviews Genetics. 12, 224

Research output: Contribution to journalLetterAcademic

Letter to the editor: Ecosystem rates of transformation matter response

Wardle, D. A., Bardgett, R. D., Callaway, R. & van der Putten, W. H., 2011, In : Science. 333, 6045, p. 937-937

Research output: Contribution to journalLetterAcademic

Open Access
3 Citations (Scopus)

Viability of GM Fungi Crucial to Malaria Control

Koenraadt, C. J. M. & Takken, W., 2011, In : Science. 332, 6026, p. 175-175

Research output: Contribution to journalLetterAcademic

2010
2 Citations (Scopus)

DDT and Malaria Prevention: van den Berg Responds

van den Berg, H., 2010, In : Environmental Health Perspectives. 118, 1, p. A15-A16

Research output: Contribution to journalLetterAcademic

Open Access
8 Citations (Scopus)

Food Security: Focus on Agriculture

Porter, J. R., Challinor, A., Ewert, F., Falloon, P., Fischer, T., Gregory, P., van Ittersum, M. K., Olesen, J. E., Moore, K. J., Rosenzweig, C. & Smith, P., 2010, In : Science. 328, 5975, p. 172-173

Research output: Contribution to journalLetterAcademic

92 Citations (Scopus)

Reduction of rare soil microbes modifies plant-herbivore interactions

Hol, W. H. G., de Boer, W., Termorshuizen, A. J., Meyer, K. M., Schneider, J. M. H., van Dam, N. M., van Veen, J. A. & van der Putten, W. H., 2010, In : Ecology Letters. 13, p. 292-301

Research output: Contribution to journalLetterAcademicpeer-review

plant-herbivore interaction
soil microorganisms
Aphidoidea
herbivores
aphid
2009
68 Citations (Scopus)

Death and cannibalism in a seasonal environment facilitate bacterial coexistence

Rozen, D. E., Philippe, N., de Visser, J. A. G. M., Lenski, R. E. & Schneider, D., 2009, In : Ecology Letters. 12, 1, p. 34-44

Research output: Contribution to journalLetterAcademicpeer-review

cannibalism
coexistence
niche
death
niches
2 Citations (Scopus)

Kinetic models of photosystem II should accommodate the effect of donor side quenching on variable chlorophyll a fluorescence in the microseconds time

Vredenberg, W. J., 2009, In : Photosynthesis Research. 102, p. 99-101

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
Biochemistry
Photosystem II Protein Complex
biochemistry
photosystem II
Quenching
2 Citations (Scopus)

No Paradox for Invasive Plants

Meisner, A., de Boer, W., Hol, G., Adams Krumins, J. & van der Putten, W. H., 2009, In : Science. 325, 5942, p. 814-814

Research output: Contribution to journalLetterAcademic

54 Citations (Scopus)

Zinc biofortification of cereals: rice differs from wheat and barley

Stomph, T. J., Jiang, W. & Struik, P. C., 2009, In : Trends in Plant Science. 14, 3, p. 123-124

Research output: Contribution to journalLetterAcademic

biofortification
zinc
barley
rice
wheat
2008
51 Citations (Scopus)

Cisgenesis and intragenesis, sisters in innovative plant breeding

Schouten, H. J. & Jacobsen, E., 2008, In : Trends in Plant Science. 13, 6, p. 260-261

Research output: Contribution to journalLetterAcademic

Open Access
15 Citations (Scopus)

The bio-fuel debate and fossil energy use in palm oil production: a critique of Reijnders and Huijbregts 2007

de Vries, S. C., 2008, In : Journal of Cleaner Production. 16, 17, p. 1926-1927

Research output: Contribution to journalLetterAcademic

18 Citations (Scopus)

The new Pest Risk Analysis for Tilletia indica, the cause of Karnal bunt of wheat, continues to support the quarantine status of the pathogen in Europe

Sansford, C. E., Baker, R. H. A., Brennan, J., Ewert, F., Gioli, B., Inman, A., Kinsella, A., Magnus, H., Miglietta, F., Murray, G., Porta-Puglia, A., Porter, J. R., Rafoss, T., Riccioni, L. & Thorne, F., 2008, In : Plant Pathology. 57, 4, p. 603-611

Research output: Contribution to journalLetterAcademicpeer-review