Research Output 1989 2020

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2014
15 Citations (Scopus)

Pectic arabinan side chains are essential for pollen cell wall integrity during pollen development

Cankar, K., Kortstee, A. J., Toonen, M. A. J., Wolters-Arts, M., Houbein, R., Mariani, C., Ulvskov, P., Jorgensen, B., Schols, H. A., Visser, R. G. F. & Trindade, L. M., 2014, In : Plant Biotechnology Journal. 12, 4, p. 492-502

Research output: Contribution to journalArticleAcademicpeer-review

Pollen
Cell Wall
cell walls
pollen
pectins
76 Citations (Scopus)

Phytoplasma Effector SAP54 Hijacks Plant Reproduction by Degrading MADS-box Proteins and Promotes Insect Colonization in a RAD23-Dependent Manner

MacLean, A. M., Orlovskis, Z., Kowitwanich, K., Zdziarska, A. M., Angenent, G. C., Immink, R. G. H. & Hogenhout, S. A., 2014, In : PloS Biology. 12, 4, 14 p., e1001835.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Phytoplasma
Insect Proteins
plant reproduction
Reproduction
Pathogens
12 Citations (Scopus)

Plasticity in Cell Division Patterns and Auxin Transport Dependency during in Vitro Embryogenesis in Brassica napus

Soriano, M., Li, H., Jacquard, C., Angenent, G. C., Krochko, J., Offringa, R. & Boutilier, K. A., 2014, In : The Plant Cell. 26, 6, p. 2568-2581

Research output: Contribution to journalArticleAcademicpeer-review

Brassica napus
Indoleacetic Acids
Cell Division
Embryonic Development
cell division
48 Citations (Scopus)

Polycistronic expression of a ß-carotene biosynthetic pathway in Saccharomyces cerevisiae coupled to ß-ionone production

Beekwilder, J., Rossum, H. M., Koopman, F., Sonntag, F., Buchhaupt, M., Schrader, J., Hall, R. D., Bosch, H. J., Pronk, J. T., van Maris, A. J. A. & Daran, J. M., 2014, In : Journal of Biotechnology. 192, partB, p. 383-392

Research output: Contribution to journalArticleAcademicpeer-review

Norisoprenoids
Biosynthetic Pathways
Carotenoids
Yeast
Saccharomyces cerevisiae
23 Citations (Scopus)

Polysaccharies of higher fungi: Biological role, structure and antioxidative activity

Kozarski, M. S., Klaus, A., Niksic, M., van Griensven, L. J. L. D., Vrvic, M. M. & Jakovljevic, D. M., 2014, In : Hemijska Industrija. 68, 3, p. 305-320

Research output: Contribution to journalArticleAcademicpeer-review

Polysaccharides
Fungi
Fungal Polysaccharides
Environmental protection
Anticoagulants
15 Citations (Scopus)

Prioritization of candidate genes in QTL regions based on associations between traits and biological processes

Bargsten, J. W., Nap, J. P. H., Sanchez Perez, G. F. & van Dijk, A. D. J., 2014, In : BMC Plant Biology. 14, 330.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
prioritization
quantitative trait loci
genes
quantitative traits
flowering

Pro-apoptotic and immunomodulatory activity of extracts of some homobasidiomycetous fungi

Shnyreva, A. V. & Van Griensven, L. D., 2014, In : Mikologiya I Fitopatologiya. 48, 4, p. 254-262 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

fungus
Phellinus linteus
fungi
gene
extracts
11 Citations (Scopus)

Production of (+)-valencene in the mushroom-forming fungus S. commune

Scholtmeijer, K., Beekwilder, J., Cankar, K., Wösten, H. A. B., Lugones, L. G. & Bosch, H. J., 2014, In : Applied Microbiology and Biotechnology. 98, 11, p. 5059-5068

Research output: Contribution to journalArticleAcademicpeer-review

Agaricales
Sesquiterpenes
Fungi
Schizophyllum
Culture Media
27 Citations (Scopus)

Production of the sesquiterpene (+)-valencene by metabolically engineered Corynebacterium glutamicum

Frohwitter, J., Heider, S. A. E., Peters-Wendisch, P., Beekwilder, J. & Wendisch, V. F., 1 Dec 2014, In : Journal of Biotechnology. 191, p. 205-213 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Corynebacterium glutamicum
Sesquiterpenes
Genes
Biosynthesis
Carotenoids
8 Citations (Scopus)

Protein Inference Using Peptide Quantification Patterns

Lukasse, P. N. J. & America, A. H. P., 2014, In : Journal of Proteome Research. 13, p. 3191-3199

Research output: Contribution to journalArticleAcademicpeer-review

Peptides
Proteins
Inference engines
Proteomics
Labels
36 Citations (Scopus)

Rapid and sustained systemic circulation of conjugated gut microbiol catabolites after single-dose black tea extract consumption

van Duynhoven, J. P. M., van der Hooft, J. J. J., van Dorsten, F. A., Peters, S., Foltz, M., Gomez-Roldan, V., Vervoort, J. J. M. & de Vos, R. C. H., 2014, In : Journal of Proteome Research. 13, 5, p. 2668-2678

Research output: Contribution to journalArticleAcademicpeer-review

Tea
Polyphenols
Metabolites
Pharmacokinetics
Plasmas
26 Citations (Scopus)

Reducing the incidence of allergy and intolerance to cereals

Gilissen, L. J. W. J., van der Meer, I. M. & Smulders, M. J. M., 2014, In : Journal of Cereal Science. 59, 3, p. 337-353

Research output: Contribution to journalArticleAcademicpeer-review

Allergies
Glutens
celiac disease
hypersensitivity
Hypersensitivity
13 Citations (Scopus)

Regulatory Network of Secondary Metabolism in Brassica rapa: Insight into the Glucosinolate Pathway

Pino del Carpio, D., Kumar, R., Arends, D., Lin, K., de Vos, R. C. H., Muth, D., Kodde, J., Boutilier, K. A., Bucher, J., Wang, X., Jansen, R. C. & Bonnema, G., 2014, In : PLoS ONE. 9, 9, 11 p., e107123.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Secondary Metabolism
Glucosinolates
Brassica rapa
glucosinolates
Regulator Genes
43 Citations (Scopus)

Research on floral timing by ambient temperature comes into blossom

Verhage, D. S. L., Angenent, G. C. & Immink, R. G. H., 2014, In : Trends in Plant Science. 19, 9, p. 583-591

Research output: Contribution to journalArticleAcademicpeer-review

ambient temperature
flowering
light quality
crop production
Angiospermae
137 Citations (Scopus)

Rice cytochrome P450 MAX1 homologs catalyze distinct steps in strigolactone biosynthesis

Zhang, Y., van Dijk, A. D. J., Scaffidi, A., Flematti, G. R., Hofmann, M., Charnikhova, T., Verstappen, F. W. A., Hepworth, J., van der Krol, A. R. & Leyser, O., 2014, In : Nature Chemical Biology. 10, p. 1028-1033

Research output: Contribution to journalArticleAcademicpeer-review

Cytochrome P-450 Enzyme System
Carotenoids
Growth
Enzymes
Dioxygenases
22 Citations (Scopus)

Striga hermonthica MAX2 restores branching but not the Very Low Fluence Response in the Arabidopsis thaliana max2 mutant

Liu, Q., Zhang, Y., Matusovaa, R., Charnikhova, T., Amini, M., Jamil, M., Fernandez-Aparicio, M., Huang, K., Timko, M. P., Westwood, J. H., Ruyter-Spira, C. P., van der Krol, A. R. & Bouwmeester, H. J., 2014, In : New Phytologist. 202, 2, p. 531-541

Research output: Contribution to journalArticleAcademicpeer-review

Striga
Striga hermonthica
Arabidopsis
branching
Arabidopsis thaliana
21 Citations (Scopus)

Structural determinants of DNA recognition by plant MADS-domain transcription factors

Muino Acuna, J. M., Smaczniak, C., Angenent, G. C., Kaufmann, K. & van Dijk, A. D. J., 2014, In : Nucleic acids research. 42, 4, p. 2138-2146

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plant DNA
MADS Domain Proteins
Transcription Factors
DNA
Binding Sites
14 Citations (Scopus)

Tetramer formation in Arabidopsis MADS domain proteins: analysis of a protein-protein interaction network

Espinosa-Soto, C., Immink, R. G. H., Angenent, G. C., Alvarez-Buylla, E. R. & Folter, de, S., 2014, In : BMC Systems Biology. 8, 17 p., 9.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
MADS Domain Proteins
Arabidopsis Proteins
Protein Interaction Maps
Arabidopsis
Protein Interaction Networks
49 Citations (Scopus)

The (r)evolution of gene regulatory networks controlling Arabidopsis plant reproduction; a two decades history

Pajoro, A., Biewers, S., Dougali, E., Valentim, F. L., Mendes, M. A., Porri, A., Coupland, G., Van de Peer, Y., van Dijk, A. D. J., Colombo, L., Davies, B. & Angenent, G. C., 2014, In : Journal of Experimental Botany. 65, 17, p. 4731-4745

Research output: Contribution to journalArticleAcademicpeer-review

plant reproduction
Gene Regulatory Networks
Arabidopsis
Reproduction
History
152 Citations (Scopus)

The genome of the stress-tolerant wild tomato species Solanum pennellii

Bolger, A., Scossa, F., Bolger, M. E., Aflitos, S. A., Schijlen, E. G. W. M., van Ham, R. C. H. J. & Klein Lankhorst, R. M., 2014, In : Nature Genetics. 46, 9, p. 1034-1038

Research output: Contribution to journalArticleAcademicpeer-review

Solanum
Lycopersicon esculentum
Genome
DNA Transposable Elements
South America
37 Citations (Scopus)

The Histone Deacetylase Inhibitor Trichostatin A Promotes Totipotency in the Male Gametophyte

Li, H., Soriano, M., Cordewener, J. H. G., Muino Acuna, J. M., Riksen-Bruinsma, T., Fukuoka, H., Angenent, G. C. & Boutilier, K. A., 2014, In : The Plant Cell. 26, 1, p. 195-209 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

trichostatin A
totipotency
histone deacetylase
Histone Deacetylase Inhibitors
Haploidy
110 Citations (Scopus)

Transcriptional control of fleshy fruit development and ripening

Karlova, R. B., Chapman, N., David, K., Angenent, G. C., Seymour, G. B. & de Maagd, R. A., 2014, In : Journal of Experimental Botany. 65, 16, p. 4527-4541

Research output: Contribution to journalArticleAcademicpeer-review

fruiting
Fruit
ripening
fruits
tomatoes
22 Citations (Scopus)

Transcriptional coordination between leaf cell differentiation and chloroplast development established by TCP20 and theand chloroplast development established by TCP20 and theand chloroplast development established by TCP20 and the subgroup Ib bHLH transcription factors

Andriankaja, M. E., Danisman, S. D., Mignolet-Spruyt, L. F., Claeys, H., Kochanke, I., Vermeersch, M., De Milde, L., De Bodt, S., Storme, V., Skirycz, A., Maurer, F., Bauer, P., Mühlenbock, P., Van Breusegem, F., Angenent, G. C., Immink, R. G. H. & Inzé, D., 2014, In : Plant Molecular Biology. 85, 3, p. 233-245

Research output: Contribution to journalArticleAcademicpeer-review

Basic Helix-Loop-Helix Transcription Factors
Chloroplasts
cell differentiation
Cell Differentiation
Iron
20 Citations (Scopus)

Valencene oxidase CYP706M1 from Alaska cedar (Callitropsis nootkatensis)

Cankar, K., van Houwelingen, A. M. M. L., Goedbloed, M. A., Renirie, R., de Jong, R. M., Bouwmeester, H. J., Bosch, H. J., Sonke, T. & Beekwilder, M. J., 2014, In : FEBS Letters. 588, 6, p. 1001-1007

Research output: Contribution to journalArticleAcademicpeer-review

Cytochrome P-450 Enzyme System
Citrus paradisi
Oxidoreductases
Yeast
Yeasts
44 Citations (Scopus)

Valencene synthase from the heartwood of Nootka cypress (Callitropsis nootkatensis) for biotechnological production of valencene

Beekwilder, M. J., van Houwelingen, A. M. M. L., Cankar, K., van Dijk, A. D. J., de Jong, R., Stoopen, G. M., Bouwmeester, H. J., Achkar, J., Sonke, T. & Bosch, H. J., 2014, In : Plant Biotechnology Journal. 12, 2, p. 174-182

Research output: Contribution to journalArticleAcademicpeer-review

nootkatone
Cupressus
Xanthocyparis nootkatensis
heartwood
terpenoids

Zaad langer goed zonder zuurstof

Groot, S. P. C., 2014, In : Resource: weekblad voor Wageningen UR.

Research output: Contribution to journalArticlePopular

Open Access
2013
5 Citations (Scopus)

16 kDa Heat Shock Protein from Heat-Inactivated Mycobacterium tuberculosis Is a Homodimer – Suitability for Diagnostic Applications with Specific Llama VHH Monoclonals

Srivastava, S. K., Ruigrok, V. J. B., Thompson, N. J., Trilling, A. K., Heck, A. J. R., van Rijn, C. J. M., Beekwilder, M. J. & Jongsma, M. A., 2013, In : PLoS ONE. 8, 5, e64040.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
New World Camelids
llamas
Mycobacterium tuberculosis
Heat-Shock Proteins
heat shock proteins
149 Citations (Scopus)

A diet high in resistant starch modulates microbiota composition, SCFA concentrations, and gene expression in pig intestine

Haenen, D., Zhang, J., Souza Da Silva, C., Bosch, G., van der Meer, I. M., van Arkel, J., van den Borne, J. J. G. C., Pérez Gutiérrez, O., Smidt, H., Kemp, B., Müller, M. R. & Hooiveld, G. J. E. J., 2013, In : The Journal of Nutrition. 143, 3, p. 274-283

Research output: Contribution to journalArticleAcademicpeer-review

Microbiota
Starch
Intestines
Swine
Diet
57 Citations (Scopus)

Agaricus bisporus and Agaricus brasiliensis (1 ¿ 6)-ß-d-glucans show immunostimulatory activity on human THP-1 derived macrophages

Smiderle, F. R., Alquini, G., Tadra-Sfeir, M. Z., Lacomini, M., Wichers, H. J. & van Griensven, L. J. L. D., 2013, In : Carbohydrate Polymers. 94, 1, p. 91-99

Research output: Contribution to journalArticleAcademicpeer-review

Glucans
Macrophages
Genes
Immune system
Polysaccharides
9 Citations (Scopus)
Microfluidics
HEK293 Cells
Biosensing Techniques
G-Protein-Coupled Receptors
Biosensors
420 Citations (Scopus)

A large-scale evaluation of computational protein function prediction

Radivojac, P., Clark, W. T., Oron, T. R., Schnoes, A. M., Wittkop, T., Kourmpetis, Y. A. I., van Dijk, A. D. J. & Friedberg, I., 2013, In : Nature Methods : techniques for life scientists and chemists. 10, p. 221-227

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Molecular Sequence Annotation
Proteins
Genome
Genes
Experiments

Alleen handel kan spanning dempen (interview met Maarten Jongsma)

van Alfen, S. & Jongsma, M. A., 2013, In : Telegraaf. p. 7

Research output: Contribution to journalArticlePopular

6 Citations (Scopus)

An Agrobacterium-mediated transformation system of pyrethrum (Tanacetum cinerariifolium) based on leaf explants

Mao, J., Cao, L. Y., Kong, L. F., Jongsma, M. A. & Wang, C. Y., 2013, In : Scientia Horticulturae. 150, p. 130-134

Research output: Contribution to journalArticleAcademicpeer-review

Tanacetum cinerariifolium
Tanacetum
Agrobacterium
kanamycin
explants
57 Citations (Scopus)

Analysis of functional redundancies within the Arabidopsis TCP transcription factor family

Danisman, S., van Dijk, A. D. J., Bimbo, A., van der Wal, F., Hennig, L., de Folter, S., Angenent, G. C. & Immink, R. G. H., 2013, In : Journal of Experimental Botany. 64, 18, p. 5673-5685

Research output: Contribution to journalArticleAcademicpeer-review

Arabidopsis
Transcription Factors
transcription factors
Computational Biology
bioinformatics
47 Citations (Scopus)

Analysis of genetically modified red-fleshed apples reveals effects on growth and consumer attributes

Espley, R. V., Bovy, A. G., Bava, C., Jaeger, S. R., Tomes, S., Norling, C., Crawford, J., Rowan, D., McGhie, T. K., Brendolise, C., Putterill, J., Schouten, H. J., Hellens, R. P. & Allan, A. C., 2013, In : Plant Biotechnology Journal. 11, 4, p. 408-419

Research output: Contribution to journalArticleAcademicpeer-review

Malus
Fruit
apples
fruits
anthocyanins
26 Citations (Scopus)

An efficient flat-surface collar-free grafting method for Arabidopsis thaliana seedlings

Marsch-Martinez, N., Franken, J., Gonzalez-Aguilera, K. L., de Folter, S., Angenent, G. C. & Alvarez-Buylla, E. R., 2013, In : Plant Methods. 9, 14.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Cotyledon
grafting (plants)
collars
Seedlings
Arabidopsis

A new opportunity for quality analysis

Hall, R. D., 2013, In : New Food. 16, 3, p. 22-25

Research output: Contribution to journalArticleAcademicpeer-review

184 Citations (Scopus)

Antibody orientation on biosensor surfaces: a minireview

Trilling, A. K., Beekwilder, M. J. & Zuilhof, H., 2013, In : The Analyst. 138, 6, p. 1619-1627

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Biosensing Techniques
Biosensors
Antibodies
Immobilization
antibody

Aphid resistance in florist's chrysanthemum (Chrysanthemum morifolium Ramat.) induced by sea anemone equistatin overexpression

Valizadeh, M., Deraison, C., Kazemitabar, S. K., Rahbé, Y. & Jongsma, M. A., 2013, In : African journal of biotechnology. 12, 50, p. 6922-6930

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Chrysanthemum
Sea Anemones
Aphids
Chrysanthemum morifolium
Anthozoa
30 Citations (Scopus)

A toolkit for the mzIdentML standard: the ProteoIDViewer, the mzidLibrary and the mzidValidator.

Ghali, F., Krishna, R., Lukasse, P. N. J., Martínez-Bartolomé, S., Reisinger, F., Hermjakob, H., Vizcaíno, J. A. & Jones, A. R., 2013, In : Molecular and Cellular Proteomics. 12, p. 3026-3035

Research output: Contribution to journalArticleAcademicpeer-review

Software
Search engines
Search Engine
Proteomics
Laboratory Personnel
9 Citations (Scopus)

A Trichome-Specific Linoleate Lipoxygenase Expressed During Pyrethrin Biosynthesis in Pyrethrum

Ramirez, A. M., Yang, T., Bouwmeester, H. J. & Jongsma, M. A., 2013, In : Lipids. 48, 10, p. 1005-1015

Research output: Contribution to journalArticleAcademicpeer-review

Chrysanthemum cinerariifolium
Trichomes
Pyrethrins
alpha-Linolenic Acid
Lipoxygenase
65 Citations (Scopus)

Automatic Chemical Structure Annotation of an LC-MSn Based Metabolic Profile from Green Tea

Ridder, L. O., van der Hooft, J. J. J., Verhoeven, S., de Vos, C. H., Bino, R. J. & Vervoort, J., 2013, In : Analytical Chemistry. 85, 12, p. 6033-6040

Research output: Contribution to journalArticleAcademicpeer-review

Metabolites
Molecules
Ions
Liquid chromatography
Complex Mixtures
29 Citations (Scopus)
avenin
Prolamins
Avena (Poaceae)
celiac disease
Celiac Disease
61 Citations (Scopus)

Balancing of Histone H3K4 Methylation States by the Kdm5c/SMCX Histone Demethylase Modulates Promoter and Enhancer Function

Outchkourov, N. S., Muino Acuna, J. M., Kaufmann, K., IJken, W. F. J., Groot Koerkamp, M. J., van Leenen, D., de Graaf, P., Holstege, F. C. P., Grosveld, F. & Timmers, H. T. M., 2013, In : Cell Reports. 3, 4, p. 1071-1079

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Histone Demethylases
Methylation
Histones
Transcription
Genes
204 Citations (Scopus)

Biosynthesis of Antinutritional Alkaloids in Solanaceous Crops Is Mediated by Clustered Genes

Itkin, M., Heinig, U., Tzfadia, O., Bhide, A. J., Shinde, B., Cardenas, P. D., Bocobza, S. E., Unger, T., Malitsky, S., Finkers, H. J., Tikunov, Y. M., Bovy, A. G., Chikate, Y., Singh, P., Rogachev, I., Beekwilder, J., Giri, A. P. & Aharoni, A., 2013, In : Science. 341, 6142, p. 175-179

Research output: Contribution to journalArticleAcademicpeer-review

glycoalkaloids
alkaloids
biosynthesis
crops
tomatoes
30 Citations (Scopus)

Biosynthesis of Sesquiterpene Lactones in Pyrethrum (Tanacetum cinerariifolium)

Ramirez, A. M., Saillard, N., Yang, T., Franssen, M. C. R., Bouwmeester, H. J. & Jongsma, M. A., 2013, In : PLoS ONE. 8, 5, e65030.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Chrysanthemum cinerariifolium
Tanacetum cinerariifolium
Tanacetum
Sesquiterpenes
sesquiterpenoid lactones
1 Citation (Scopus)

Caffeoylquinic Acids Biosynthesis and Accumulation in Cynara cardunculus: State of the Art

Moglia, A., Comino, C., Menin, B., Portis, E., Aquadro, A., Beekwilder, M. J., Hehn, A., Bourgaud, F. & Lanteri, S., 2013, In : Acta Horticulturae. 983, p. 401-406

Research output: Contribution to journalArticleAcademicpeer-review

Cynara cardunculus
artichokes
biosynthesis
chlorogenic acid
secondary metabolites
54 Citations (Scopus)

CAROTENOID CLEAVAGE DIOXYGENASE 7 modulates plant growth, reproduction, senescence, and determinate nodulation in the model legume Lotus japonicas

Liu, J., Novero, M., Charnikhova, T., Ferrandino, A., Schubert, A., Ruyter-Spira, C. P., Biofante, P., Lovisolo, C. & Bouwmeester, H. J., 2013, In : Journal of Experimental Botany. 64, 7, p. 1967-1981

Research output: Contribution to journalArticleAcademicpeer-review

Dioxygenases
Lotus
Carotenoids
nodulation
Fabaceae
32 Citations (Scopus)

Changes in polyphenol content during production of grape juice concentrate

Capanoglu, E., de Vos, R. C. H., Hall, R. D., Boyacioglu, D. & Beekwilder, M. J., 2013, In : Food Chemistry. 139, 1-4, p. 521-526

Research output: Contribution to journalArticleAcademicpeer-review

juice concentrates
grape juice
Anthocyanins
Vitis
Polyphenols
41 Citations (Scopus)

Changes in sour cherry (Prunus cerasus L.) antioxidants during nectar processing and in vitro gastrointestinal digestion.

Toydemir, G., Capanoglu, E., Kamiloglu, S., Boyacioglu, D., de Vos, C. H., Hall, R. D. & Beekwilder, M. J., 2013, In : Journal of Functional Foods. 5, 3, p. 1402-1413

Research output: Contribution to journalArticleAcademicpeer-review

Plant Nectar
Prunus cerasus
nectar
Digestion
Antioxidants