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2019

Searching attractants for the detection of potato Epitrix species

Boavida, C., Santos, M., Schuurman-de Bruin, A., Mumm, R., Barreto da Costa, G. & Booij, C. J. H., 10 Mar 2019, In : Revista de Ciencias Agrarias. 41, Especial, p. 125-132

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Seed maturation and post-harvest ripening negatively affect arabidopsis somatic embryogenesis

Wu, H., Chen, B., Fiers, M., Wróbel-Marek, J., Kodde, J., Groot, S. P. C., Angenent, G., Feng, H., Bentsink, L. & Boutilier, K., Oct 2019, In : Plant Cell, Tissue and Organ Culture. 139, 1, p. 17-27

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Spatial distribution of soil nematodes relates to soil organic matter and life strategy

Quist, C. W., Gort, G., Mooijman, P., Brus, D. J., van den Elsen, S., Kostenko, O., Vervoort, M., Bakker, J., van der Putten, W. H. & Helder, J., 1 Sep 2019, In : Soil Biology and Biochemistry. 136, 107542.

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)
Open Access
1 Citation (Scopus)

Substrate promiscuity of enzymes from the sesquiterpene biosynthetic pathways from Artemisia annua and Tanacetum parthenium allows for novel combinatorial sesquiterpene production

Beyraghdar Kashkooli, A., van der Krol, A. R., Rabe, P., Dickschat, J. S. & Bouwmeester, H., 1 Jul 2019, In : Metabolic Engineering. 54, p. 12-23

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)
Open Access

The effect of isolation methods of tomato pollen on the results of metabolic profiling

Paupière, M. J., Tikunov, Y. M., Firon, N., de Vos, R. C. H., Maliepaard, C., Visser, R. G. F. & Bovy, A. G., 1 Jan 2019, In : Metabolomics. 15, 1, 11.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

The Metabolomics Society—Current State of the Membership and Future Directions

Zanetti, K. A., Hall, R. D., Griffin, J. L., Putri, S., Salek, R. M., Styczynski, M. P., Tugizimana, F. & van der Hooft, J. J. J., 3 May 2019, In : Metabolites. 9, 89.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The SAUR gene family: the plant’s toolbox for adaptation of growth and development

Stortenbeker, N. & Bemer, M., 1 Jan 2019, In : Journal of Experimental Botany. 70, 1, p. 17-27

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

Tissue specific expression and genomic organization of bitter sesquiterpene lactone biosynthesis in Cichorium intybus L. (Asteraceae)

Bogdanovic, M., Cankar, K., Todorovic, S., Dragicevic, M., Simonovic, A., van Houwelingen, A. M. M. L., Schijlen, E. G. W. M., Schipper, A., Gagneul, D., Hendriks, T., Quillet, M-C., Bouwmeester, H. J., Bosch, H. J. & Beekwilder, M. J., Mar 2019, In : Industrial Crops and Products. 129, p. 253-260

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)

Toward developing a yeast cell factory for the production of prenylated flavonoids

Levisson, M., Araya-Cloutier, C., De Bruijn, W. J. C., Van Der Heide, M., Salvador López, J. M., Daran, J. M., Vincken, J. P. & Beekwilder, J., 24 Apr 2019, In : Journal of Agricultural and Food Chemistry. 67, 49, p. 13478-13486

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Translocation and de novo synthesis of eicosapentaenoic acid (EPA) during nitrogen starvation in Nannochloropsis gaditana

Janssen, J. H., Lamers, P. P., de Vos, C. H., Wijffels, R. H. & Barbosa, M. J., Jan 2019, In : Algal Research. 37, p. 138-144

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)
2018

A high-quality genome sequence of Rosa chinensis to elucidate ornamental traits

Hibrand Saint-Oyant, L., Ruttink, T., Hamama, L., Kirov, I., Lakhwani, D., Zhou, N. N., Bourke, P. M., Daccord, N., Leus, L., Schulz, D., van de Geest, H., Hesselink, T., Van Laere, K., Debray, K., Balzergue, S., Thouroude, T., Chastellier, A., Jeauffre, J., Voisine, L., Gaillard, S. & 21 others, Borm, T. J. A., Arens, P., Voorrips, R. E., Maliepaard, C., Neu, E., Linde, M., Le Paslier, M. C., Bérard, A., Bounon, R., Clotault, J., Choisne, N., Quesneville, H., Kawamura, K., Aubourg, S., Sakr, S., Smulders, M. J. M., Schijlen, E., Bucher, E., Debener, T., De Riek, J. & Foucher, F., 2018, In : Nature Plants. 4, p. 473-484

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
38 Citations (Scopus)

A molecular network for functional versatility of HECATE transcription factors

Gaillochet, C., Jamge, S., van der Wal, F., Angenent, G., Immink, R. & Lohmann, J. U., 1 Jul 2018, In : Plant Journal. 95, 1, p. 57-70

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)

Arabidopsis thaliana ambient temperature responsive lncRNAs

Severing, E., Faino, L., Jamge, S., Busscher, M., Kuijer-Zhang, Y., Bellinazzo, F., Busscher-Lange, J., Fernández, V., Angenent, G. C., Immink, R. G. H. & Pajoro, A., 13 Jul 2018, In : BMC Plant Biology. 18, 1, 145.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

A seed treatment to prevent shoot apical meristem arrest in Brassica oleracea

de Jonge, J., Goffman, F. D., Kodde, J., Angenent, G. C. & Groot, S. P. C., 26 Jan 2018, In : Scientia Horticulturae. 228, p. 76-80

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Automated high-throughput individual tracking system for insect behavior: Applications on memory retention in parasitic wasps

de Bruijn, J. A. C., Vet, L. E. M., Jongsma, M. A. & Smid, H. M., Nov 2018, In : Journal of Neuroscience Methods. 309, p. 208-217

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Breeding for healthier wheat

Gilissen, L. J. W. J. & van den Broeck, H. C., 1 Jul 2018, In : Cereal Foods World. 63, 4, p. 132-136

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)
Open Access
2 Citations (Scopus)

Chemical characterization and wound healing property of a β-D-glucan from edible mushroom Piptoporus betulinus

de Jesus, L. I., Smiderle, F. R., Ruthes, A. C., Vilaplana, F., Dal'Lin, F. T., Maria-Ferreira, D., Werner, M. F., Van Griensven, L. J. L. D. & Iacomini, M., 1 Oct 2018, In : International Journal of Biological Macromolecules. 117, p. 1361-1366

Research output: Contribution to journalArticleAcademicpeer-review

3 Citations (Scopus)

Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

Aerts, N., de Bruijn, S., van Mourik, H., Angenent, G. C. & van Dijk, A. D. J., 25 Jun 2018, In : BMC Plant Biology. 18, 1, 131.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses

van Velzen, R., Holmer, R., Bu, F., Rutten, L. J. J., van Zeijl, A. L., Liu, W., Santuari, L., Cao, Q., Sharma, T., Shen, D., Purwana Roswanjaya, Y., Wardhani, T., Seifi Kalhor, M., Jansen, J., van den Hoogen, D. J., Güngör, B., Hartog, M. V., Hontelez, J., Verver, J., Yang, W-C. & 11 others, Schijlen, E. G. W. M., Repin, R., Schilthuizen, M., Schranz, M. E., Heidstra, R., Miyata, K., Fedorova, E., Kohlen, W., Bisseling, A. H. J., Smit, S. & Geurts, R., 15 May 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 20, p. E4700-E4709

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
49 Citations (Scopus)

Correcting palindromes in long reads after whole-genome amplification

Warris, S., Schijlen, E. G. W. M., van de Geest, H. C., Vegesna, R., Hesselink, T., te Lintel Hekkert, B., Sanchez Perez, G. F., Medvedev, P., Makova, K. D. & de Ridder, D., 6 Nov 2018, In : BMC Genomics. 19, 798.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Development of Simple Sequence Repeat Markers in Hazelnut (Corylus avellana L.) by Next-Generation Sequencing and Discrimination of Turkish Hazelnut Cultivars

Öztürk, S. C., Göktay, M., Allmer, J., Doğanlar, S. & Frary, A., Dec 2018, In : Plant Molecular Biology Reporter. 36, 5-6, p. 800–811

Research output: Contribution to journalArticleAcademicpeer-review

2 Citations (Scopus)

DNA sequence and shape are predictive for meiotic crossovers throughout the plant kingdom

Demirci, S., Peters, S. A., de Ridder, D. & van Dijk, A. D. J., 1 Aug 2018, In : Plant Journal. 95, 4, p. 686-699 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
4 Citations (Scopus)
3 Citations (Scopus)

Effect of dietary fiber (inulin) addition on phenolics and in vitro bioaccessibility of tomato sauce

Tomas, M., Beekwilder, J., Hall, R. D., Diez Simon, C., Sagdic, O. & Capanoglu, E., 1 Apr 2018, In : Food Research International. 106, p. 129-135

Research output: Contribution to journalArticleAcademicpeer-review

11 Citations (Scopus)

Engineering de novo anthocyanin production in Saccharomyces cerevisiae

Levisson, M., Patinios, C., Hein, S., de Groot, P. A., Daran, J. M., Hall, R. D., Martens, S. & Beekwilder, J., 3 Jul 2018, In : Microbial Cell Factories. 17, 1, 103.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)

Engineering storage capacity for volatile sesquiterpenes in Nicotiana benthamiana leaves

Delatte, T. L., Scaiola, G., Molenaar, J., de Sousa Farias, K., Alves Gomes Albertti, L., Busscher, J., Verstappen, F., Carollo, C., Bouwmeester, H. & Beekwilder, J., Dec 2018, In : Plant Biotechnology Journal. 16, 12, p. 1997-2006

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
5 Citations (Scopus)

Food processing and breeding strategies for coeliac-safe and healthy wheat products

Jouanin, A., Gilissen, L. J. W. J., Boyd, L. A., Cockram, J., Leigh, F. J., Wallington, E. J., van den Broeck, H. C., van der Meer, I. M., Schaart, J. G., Visser, R. G. F. & Smulders, R., Aug 2018, In : Food Research International. 110, p. 11-21

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
13 Citations (Scopus)

Genetical genomics of quality related traits in potato tubers using proteomics

Acharjee, A., Chibon, P. Y. F. R. P., Kloosterman, B. A., America, A. H. P., Renaut, J., Maliepaard, C. A. & Visser, R. G. F., 23 Jan 2018, In : BMC Plant Biology. 18, 20.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
10 Citations (Scopus)

Genetic control of meristem arrest and life span in Arabidopsis by a FRUITFULL-APETALA2 pathway

Balanzà, V., Martínez-Fernández, I., Sato, S., Yanofsky, M. F., Kaufmann, K., Angenent, G. C., Bemer, M. & Ferrándiz, C., 8 Feb 2018, In : Nature Communications. 9, 1, 565.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
23 Citations (Scopus)

Growing Azolla to produce sustainable protein feed: The effect of differing species and CO2 concentrations on biomass productivity and chemical composition.

Brouwer, P., Schluepmann, H., Nierop, K. G. J., Elderson, J., Bijl, P. K., van der Meer, I. M., de Visser, W., Reichart, G. J., Smeekens, S. & van der Werf, A. K., Sep 2018, In : Journal of the Science of Food and Agriculture. 98, 12, p. 4759-4768

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
6 Citations (Scopus)

Health effects of feeding genetically modified (GM) crops to livestock animals: A review

de Vos, C. J. & Swanenburg, M., Jul 2018, In : Food and Chemical Toxicology. 117, p. 3-12

Research output: Contribution to journalArticleAcademicpeer-review

7 Citations (Scopus)

Host- and stage-dependent secretome of the arbuscular mycorrhizal fungus Rhizophagus irregularis

Zeng, T., Holmer, R., Hontelez, J., te Lintel-Hekkert, B., Marufu, L., de Zeeuw, T., Wu, F., Schijlen, E., Bisseling, T. & Limpens, E., May 2018, In : The Plant Journal. 94, 3, p. 411-425

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
20 Citations (Scopus)

Identification of the Bisabolol Synthase in the Endangered Candeia Tree (Eremanthus erythropappus (DC) McLeisch)

Alves Gomes Albertti, L., Delatte, T. L., de Souza Farias, K., Boaretto, A. G., Verstappen, F. W. A., van Houwelingen, A. M. M. L., Cankar, K., Carollo, C. A., Bouwmeester, H. J. & Beekwilder, M. J., 19 Sep 2018, In : Frontiers in Plant Science. 9, 1340.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

In depth investigation of the metabolism of Nectandra megapotamica chemotypes

de S. Farias, K., Delatte, T., do C. de O. Arruda, R., Alves, F. M., Silva, D. B., Beekwilder, J. & Carollo, C. A., 1 Aug 2018, In : PLoS ONE. 13, 8, e0201996.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Intact DNA purified from flow-sorted nuclei unlocks the potential of next-generation genome mapping and assembly in Solanum species

Gaiero, P., Šimková, H., Vrána, J., Santiñaque, F. F., López-Carro, B., Folle, G. A., van de Belt, J., Peters, S. A., Doležel, J. & de Jong, H., 1 Jan 2018, In : MethodsX. 5, p. 328-336

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Kauniolide synthase is a P450 with unusual hydroxylation and cyclization-elimination activity

Liu, Q., Beyraghdar Kashkooli, A., Manzano, D., Pateraki, I., Richard, L., Kolkman, P., Lucas, M. F., Guallar, V., de Vos, R. C. H., Franssen, M. C. R., van der Krol, A. & Bouwmeester, H., 7 Nov 2018, In : Nature Communications. 9, 1, 4657.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
3 Citations (Scopus)

Lost in diversity: the interactions between soil-borne fungi, biodiversity and plant productivity

Mommer, L., Cotton, A., Raaijmakers, J. M., Termorshuizen, A. J., van Ruijven, J., Hendriks, M., van Rijssel, S., van de Mortel, J. E., van der Paauw, J. W. M., Schijlen, E. G. W. M., Smit-Tiekstra, A., Berendse, F., de Kroon, H. & Dumbrell, A. J., Apr 2018, In : New Phytologist. 218, 2, p. 542-553

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
32 Citations (Scopus)

Metabolic responses of Eucalyptus species to different temperature regimes

Mokochinski, J. B., Mazzafera, P., Sawaya, A. C. H. F., Mumm, R., de Vos, R. C. H. & Hall, R. D., May 2018, In : Journal of Integrative Plant Biology. 60, 5, p. 397-411

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
10 Citations (Scopus)

Metabolite variation in the lettuce gene pool: towards healthier crop varieties and food

van Treuren, R., van Eekelen, H. D. L. M., Wehrens, R. & de Vos, R. C. H., 1 Nov 2018, In : Metabolomics. 14, 11, 146.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
2 Citations (Scopus)

Methyl Perillate as a Highly Functionalized Natural Starting Material for Terephthalic Acid

Jongedijk, E. J., van der Klis, F., de Zwart, R., van Es, D. S. & Beekwilder, M. J., 8 Feb 2018, In : ChemistryOpen. 7, 2, p. 201-203

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
1 Citation (Scopus)

Microbiome-related metabolite changes in gut tissue, cecum content and feces of rats treated with antibiotics

Behr, C., Sperber, S., Jiang, X., Strauss, V., Kamp, H., Walk, T., Herold, M., Beekmann, K., Rietjens, I. M. C. M. & van Ravenzwaay, B., 15 Sep 2018, In : Toxicology and Applied Pharmacology. 355, p. 198-210

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Modification of chrysanthemum odour and taste with chrysanthemol synthase induces strong dual resistance against cotton aphids

Hu, H., Li, J., Delatte, T., Vervoort, J., Gao, L., Verstappen, F., Xiong, W., Gan, J., Jongsma, M. A. & Wang, C., Aug 2018, In : Plant Biotechnology Journal. 16, 8, p. 1434-1445

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
7 Citations (Scopus)

Nicotiana benthamianaα-galactosidase A1.1 can functionally complement human α-galactosidase A deficiency associated with Fabry disease

Kytidou, K., Beekwilder, J., Artola, M., van Meel, E., Wilbers, R. H. P., Moolenaar, G. F., Goosen, N., Ferraz, M. J., Katzy, R., Voskamp, P., Florea, B. I., Hokke, C. H., Overkleeft, H. S., Schots, A., Bosch, D., Pannu, N. & Aerts, J. M. F. G., 29 Jun 2018, In : Journal of Biological Chemistry. 293, 26, p. 10042-10058

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Novel functions of the Arabidopsis transcription factor TCP5 in petal development and ethylene biosynthesis

van Es, S. W., Silveira, S. R., Rocha, D. I., Bimbo, A., Martinelli, A. P., Dornelas, M. C., Angenent, G. C. & Immink, G. H., Jun 2018, In : The Plant Journal. 94, 5, p. 867-879

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
10 Citations (Scopus)

Oats in healthy gluten-free and regular diets: A perspective

Smulders, M. J. M., van de Wiel, C. C. M., van den Broeck, H. C., van der Meer, I. M., Israel-Hoevelaken, T. P. M., Timmer, R. D., van Dinter, B. J., Braun, S. & Gilissen, L. J. W. J., Aug 2018, In : Food Research International. 110, p. 3-10

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
9 Citations (Scopus)
Open Access
10 Citations (Scopus)