Research Output 2006 2019

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Chapter
2018
3 Citations (Scopus)

3C in maize and arabidopsis

Weber, B., Jamge, S. & Stam, M., 2018, Plant Chromatin Dynamics: Methods and Protocols. Humana Press Inc., p. 247-270 (Methods in Molecular Biology; vol. 1675).

Research output: Chapter in Book/Report/Conference proceedingChapter

Arabidopsis
Zea mays
Chromosomes
Genome
Research
2 Citations (Scopus)

Identification of in planta protein–protein interactions using IP-MS

Jamge, S., Angenent, G. & Bemer, M., 2018, Plant Chromatin Dynamics: Methods and Protocols. Humana Press Inc., p. 315-329 (Methods in Molecular Biology; vol. 1675).

Research output: Chapter in Book/Report/Conference proceedingChapter

Immunoprecipitation
Chromatin
Mass Spectrometry
Transcription Factors
Protein Interaction Maps

Organic seed production, certification and availability: Corp Breeding and cultivation:

Groot, S. P. C. & Raaijmakers, M. H. J. E., 2018, Improving organic crop cultivation. Köpke, U. (ed.). Cambridge, UK: Burleigh Dodds Science Publishing Limited

Research output: Chapter in Book/Report/Conference proceedingChapter

seed crop production
certification
breeding
seeds
seed quality
5 Citations (Scopus)

Profiling nucleosome occupancy by MNase-seq: Experimental protocol and computational analysis

Pajoro, A., Muiño, J. M., Angenent, G. C. & Kaufmann, K., 2018, Plant Chromatin Dynamics: Methods and Protocols. Humana Press Inc., p. 167-181 (Methods in Molecular Biology; vol. 1675).

Research output: Chapter in Book/Report/Conference proceedingChapter

Micrococcal Nuclease
Nucleosomes
Genome
Chromatin
Digestion
3 Citations (Scopus)

Unraveling the complex epigenetic mechanisms that regulate gene activity

Bemer, M., 2018, Plant Chromatin Dynamics. Humana Press Inc., p. 205-231 (Methods in Molecular Biology; vol. 1675).

Research output: Chapter in Book/Report/Conference proceedingChapter

Epigenomics
Genes
Transcription Factors
Histone Code
Nucleic Acid Conformation
2017
3 Citations (Scopus)

SELEX-seq: A method to determine DNA binding specificities of plant transcription factors

Smaczniak, C., Angenent, G. C. & Kaufmann, K., 2017, Plant gene regulatory networks: Methods and protocols. Kaufmann, K. & Mueller-Roeber, B. (eds.). Humana Press Inc., Vol. 1629. p. 67-82 (Methods in Molecular Biology - Springer Protocols; vol. 1629).

Research output: Chapter in Book/Report/Conference proceedingChapter

SELEX Aptamer Technique
Transcription Factors
DNA
High-Throughput Nucleotide Sequencing
Nucleotide Motifs
2015
7 Citations (Scopus)

Bacillus thuringiensis-based Products for Insect Pest Control

de Maagd, R. A., 2015, Principles of Plant-Microbe Interactions : Microbes for Sustainable Agriculture. Lugtenberg, B. (ed.). Springer, p. 185-192 185 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

pest control
Bacillus thuringiensis
insect pests
toxins
crystals
7 Citations (Scopus)

Characterization of in vivo DNA-binding events of plant transcription factors by ChIP-seq: Experimental protocol and computational analysis

Van Mourik, H., Muiño, J. M., Pajoro, A., Angenent, G. C. & Kaufmann, K., 2015, Plant Functional Genomics: Methods and Protocols: Second Edition. Springer New York LLC, p. 93-121

Research output: Chapter in Book/Report/Conference proceedingChapter

Transcription Factors
transcription factors
DNA
Proteins
proteins

Health Management for Seeds and Other Organic Propagation Material

Koch, E. & Groot, S. P. C., 2015, Plant Diseaes and Their Management in Organic Agriculture. Finckh, M. R., van Bruggen, A. H. C. & Tamm, L. (eds.). Minnesota: The American Phytopathological Society, p. 189-203

Research output: Chapter in Book/Report/Conference proceedingChapter

propagation materials
seeds
organic production
seed tubers
plant cuttings
2 Citations (Scopus)

Pepper, Sweet (Capsicum annuum)

Heidmann, I. & Boutilier, K. A., 2015, Agrobacterium Protocols: Volume 1 (third edition). Wang, K. (ed.). New York, p. 321-334 368 p. (Methods in Molecular Biology; no. 1223).

Research output: Chapter in Book/Report/Conference proceedingChapter

sweet peppers
Capsicum annuum
Agrobacterium
genetically modified organisms
Capsicum
2013

Biological containment strategies for transgenic crops

de Maagd, R. A. & Boutilier, K. A., 2013, Genetically modified and non-genetically modified food supply chains: Co-existence and traceability. Bertheau, Y. (ed.).

Research output: Chapter in Book/Report/Conference proceedingChapter

biocontainment
genetically modified organisms
crops
transgenes
plant development
2012

Kennisbasisthema 7. Technologische ontwikkeling

Janssen, S. J. C. & Angenent, G. C., 2012, Jaarrapportage Kennisbasisonderzoek 2011. [S.l.]: S.n., p. 99-110

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
2011
4 Citations (Scopus)

Microarray-Based Identification of Transcription Factor Target Genes

Gorte, M., Horstman, A., Page, R. B., Heidstra, R., Stromberg, A. & Boutilier, K. A., 2011, Plant Transcription Factors: Methods and Protocols.. Yuan, L. & Perry, S. E. (eds.). p. 119-141 347 p. (Methods in Molecular Biology; no. 754).

Research output: Chapter in Book/Report/Conference proceedingChapter

transcription factors
statistical analysis
genes
DNA
plant identification
5 Citations (Scopus)

Visualizing and characterizing In Vivo DNA-Binding Events and Direct Target Genes of Plant Transcription Factors.

Muino, J. M., Angenent, G. C. & Kaufmann, K., 2011, Plant Transcription Factors, Methods in Molecular Biology. Yuan, L. & Perry, S. E. (eds.). p. 293-305 13 p. (754; no. 17).

Research output: Chapter in Book/Report/Conference proceedingChapter

Plant Genes
Transcription Factors
Genome
DNA
Computational Biology
27 Citations (Scopus)

Yeast Protein–Protein Interaction Assays and Screens

de Folter, S. & Immink, G. H., 2011, Plant Transcription Factors, Methods in Molecular Biology. Yuan, L. & Perry, S. E. (eds.). p. 145-165 21 p. (Methods in Molecular Biology; no. 754).

Research output: Chapter in Book/Report/Conference proceedingChapter

Yeasts
Proteins
Transcription Factors
Reporter Genes