Research Output 2005 2020

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Abstract
2019

Use of disease suppressiveness in the battle against potato blackleg

van der Wolf, J. M., Coipan, E. C., Krijger, M. C., Kastelein, P., Nijhuis, E. H., Kurm, V., Warris, S. & Fokkema, J., 2019.

Research output: Contribution to conferenceAbstractAcademic

2018

Professional, easy to use and robust bioinformatic tools

Warris, S. & van der Lee, T. A. J., 12 Dec 2018. 1 p.

Research output: Contribution to conferenceAbstractAcademic

Open Access
2017

Suppressiveness of Potato against Dickeya solani

van der Wolf, J. M., Coipan, E. C., Kastelein, P., Krijger, M. C., Tom, J., Riksen, N., Nijhuis, E. H., Warris, S. & Fokkema, J., 2017, Euphresco III Dickeya / Pectobacterium workshop: programme & Abstracts. p. 8-8 1 p.

Research output: Chapter in Book/Report/Conference proceedingAbstract

2016

Broad phylogenetic analyses of the four major plant-parasitic nematode lineages reveal essentially distinct origins and diversification patterns

Holterman, M. H. M., Karegar, A., Mooijman, P. J. W., Decreamer, W., van den Elsen, S. J. J., Vervoort, M. T. W., Quist, C. W., Karssen, G., Opperman, C. H., Bird, D. M., Smant, G. & Helder, J., 2016, p. 66-66.

Research output: Contribution to conferenceAbstractAcademic

plant parasitic nematodes
Trichodoridae
Longidoridae
parasitism
phylogeny

Characterization of Pseudomonas species causing brown blotch of Agaricus bisporis

van der Wolf, J. M., Kastelein, P., Krijger, M. C., Hendriks, M. J. A., van der Lee, T. A. J., Warris, S., Stol, W. & Amsing, J., 2016.

Research output: Contribution to conferenceAbstractAcademic

Nematoda
spatial distribution
soil types
assays
clay

Suppressiveness of casing material against bacterial blotch.

van der Wolf, J. M., Kastelein, P., Krijger, M. C., Hendriks, M. J. A., van der Lee, T. A. J., Taparia, T., Warris, S., Stol, W. & Amsing, J., 2016.

Research output: Contribution to conferenceAbstractAcademic

You say tomato, I say potato: high-quality genome assembly of the sister-group species Solanum etuberosum provides insights into genome and trait evolution

Berke, L., Grandont, L., Aflitos, S. A., Bachem, C. W. B., Becker, F. F. M., Bouwmeester, K., van de Geest, H. C., Govers, F., de Jong, H., Peters, S. A., Sanchez Perez, G. F., Schijlen, E. G. W. M., van den Berg, R. & Schranz, M. E., 2016, p. 28-29.

Research output: Contribution to conferenceAbstractAcademic

Open Access
Solanum etuberosum
genome assembly
tomatoes
potatoes
genome
2015

Mesoscale distribution patterns of terrestrial nematodes

Quist, C. W., Mooijman, P. J. W., Brus, D. J., Gort, G., van den Elsen, S. J. J., Mulder, C., Termorshuizen, A., Bakker, J. & Helder, J., 2015.

Research output: Contribution to conferenceAbstractAcademic

Nematoda
geostatistics
sampling
soil quality
soil food webs

The spatial distribution of nematode taxa in arable and semi-natural fields

Quist, C. W., Mooijman, P. J. W., Brus, D. J., Gort, G., van den Elsen, S. J. J., Mulder, C., Termorshuizen, A., Bakker, J. & Helder, J., 2015, 54th Annual meeting of the Society of Nematologists. SON, p. 74-75

Research output: Chapter in Book/Report/Conference proceedingAbstract

2014

Biological and systematic implications of phylogenetic analysis of ~ 2,800 full length small subunit ribosomal DNA sequences

Helder, J., Mooijman, P. J. W., van den Elsen, S. J. J., van Megen, H. H. B., Vervoort, M. T. W., Quist, C. W., Bert, W., Karegar, A., Karssen, G. & Decreamer, W., 2014, Proceedings of the 6th International Congress of Nematology. p. 26-26

Research output: Chapter in Book/Report/Conference proceedingAbstract

ribosomal DNA
nucleotide sequences
Nematoda
phylogeny
Nematomorpha

Spatial distributions of nematode taxa in arable and (semi-)natural fields

Quist, C. W., Mooijman, P. J. W., van den Elsen, S. J. J., Brus, D. J., Mulder, C., Termoshuizen, A., Bakker, J. & Helder, J., 2014, Proceedings of the 6th International Congress of Nematology. p. 154-155

Research output: Chapter in Book/Report/Conference proceedingAbstract

nematode
spatial distribution
assay
patchiness
geostatistics
2013

Insights in the evolution of plant parasitism within the phylum Nematoda based on neutral and pathogenicity-related genes.

Helder, J., van den Elsen, S. J. J., Mooijman, P. J. W., Rybarczyk-Mydlowska, K., Landeweert, R. & Goverse, A., 2013, Proceedings of 1st Annual Meeting, COST FA 1208, 09-11 October 2013, Birnam, Scotland. p. 54-54

Research output: Chapter in Book/Report/Conference proceedingAbstract

parasitism
pathogenicity
Nematoda
plant parasitic nematodes
ribosomal DNA
2012

Quantitative analysis of terrestrial nematode assemblages on the basis of a phylum-wide SSU rDNA molecular framework

Helder, J., Landeweert, R., Quist, C. W., Vervoort, M. T. W., van Megen, H. H. B., van den Elsen, S. J. J., Mooijman, P. J. W., Mulder, C. & Bakker, J., 2012.

Research output: Contribution to conferenceAbstractAcademic

2011

Barcoding quarantine nematodes and their close relatives: an update on the status of the QBOL-project

Holterman, M. H. M., Frey, J. E., Helder, J., Mooijman, P. J. W. & Kiewnick, S., 2011, 63rd International Symposium on Crop Protection, 24 May 2011, Gent, Belgium. p. 229-229

Research output: Chapter in Book/Report/Conference proceedingAbstract

barcoding
DNA barcoding
quarantine
nematology
Nematoda

DNA Barcode-based tool for the monitoring of nematode assemblages

Vervoort, M. T. W., Mooijman, P. J. W., van Megen, H. H. B., van den Elsen, S. J. J., Rybarczyk-Mydlowska, K. D., Vonk, J. A., Mulder, C., de Ruiter, P. C., Bakker, J. & Helder, J., 2011, Society of Nematologists Annual Meetings Sites 50 years of Science and Fellowship, Corvalls, Oregon, USA, 17 -20 July, 2011. Ingham, R. (ed.). Corvallis, Oregon, USA: SON, Society of Nematology, p. 161-162

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Phylogency, systematics and biogeography of the phylum Nematoda

Helder, J., van Megen, H. H. B., van den Elsen, S. J. J., Mooijman, P. J. W., Karegar, A., Karssen, G. & Bakker, J., 2011, Proceedings of the XLIII ONTA Annual Meeting, Coimbra, Portugal, 4-8 September 2011. Coimbra, Portugal: Onta, p. 77-77

Research output: Chapter in Book/Report/Conference proceedingAbstract

2010

An integrated genome wide genetic map of sequenced NBS-LRR disease resistance gene homologues (RGH) and resistance loci in potato

Bakker, E. H., Borm, T. J. A., Prins, J. C. P., van der Geest, A. H. M., van der Vossen, E., Uenk, G. E., Sabatino, G. J. H., Arens, M. J. B., Nap, J. P. H., de Boer, J. M., van Eck, H., te Lintel Hekkert, B., van Ham, R. C. H. J., Vossen, J., van der Linden, G., Muskens, M., Allefs, S., Bakker, J. & Goverse, A., 2010, Potato breeding after the completion of the dna sequence of the potato genome, EUCARPIA - EAPR joint meeting, Wageningen, The Netherlands, 27 - 30 June, 2010. Wageningen: Eucarpia, p. 53-53

Research output: Chapter in Book/Report/Conference proceedingAbstract

In search of the evolutionary origin of cellulase genes within the plant parasitedominated nematode order tylenchida

Rybarczyk-Mydlowska, K. D., van Megen, H. H. B., van den Elsen, S. J. J., Mooijman, P. J. W., Smant, G., Bakker, J. & Helder, J., 2010, Scientific Conference on Evolutionary Biology of Caenorhabditis and other Nematodes, Hinxton, Cambridge, UK, 5-8 June 2010. p. P53-P53

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Potential alternative barcoding genes in the genus Meloidogyne

Holterman, M. H. M., Kiewnick, S., Helder, J., Mooijman, P. J. W. & Frey, J. E., 2010, Proceedings of the 30th International Symposium of the European Society of Nematologists(ESN) and 5th Phylloxera Symposium, Vienna, Austria, 19-23 September 2010. p. 31-31

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Root knot nematode - a succes story among the plant parasitic nematodes - constitute & do constitute an ancient asexual clade

Helder, J., Karssen, G., Bert, W., van Megen, H. H. B., van den Elsen, S. J. J., Mooijman, P. J. W., Rybarczyk-Mydlowska, K. D. & Bakker, J., 2010, COST 872 Workshop & MC Meeting on NEMAGENICS Exploiting genomics to understand plant-nematode interactions, Lisboa, Portugal, 24-27 May 2010. Lisbon, p. 22-22

Research output: Chapter in Book/Report/Conference proceedingAbstract

The use of SSU rDNA sequence signatures for the quantitative analysis of free living nematode assemblages

Vervoort, M. T. W., van den Elsen, S. J. J., van Megen, H. H. B., Mooijman, P. J. W., Holterman, M. H. M. & Helder, J., 2010, 30th International Symposium of the European Society of Nematologists(ESN) and 5th Phylloxera Symposium, 19 - 23 September, 2010. Vienna, Austria. Vienna, p. 30-30

Research output: Chapter in Book/Report/Conference proceedingAbstract

Open Access

Use of DNA barcodes for the monitoring of seasonal fluctuations in nematode communities

Vervoort, M. T. W., Mooijman, P. J. W., van Megen, H. H. B., van den Elsen, S. J. J., Rybarczyk-Mydlowska, K. D., Vonk, J. A., Mulder, C., de Ruiter, P. C., Bakker, J. & Helder, J., 2010.

Research output: Contribution to conferenceAbstractAcademic

2009
Open Access
2005

Identification of sow and piglet factors affecting the duration of the expulsive stage of farrowing and piglet birth intervals

van Dijk, A. D. J., van Rens, B. T. T. M., van der Lende, T. & Taverne, M. A. M., 2005.

Research output: Contribution to conferenceAbstractAcademic