Research Output 1995 2020

2020

Compositional turnover and variation in Eemian pollen sequences in Europe

Felde, V. A., Flantua, S. G. A., Jenks, C. R., Benito, B. M., de Beaulieu, J. L., Kuneš, P., Magri, D., Nalepka, D., Risebrobakken, B., ter Braak, C. J. F., Allen, J. R. M., Granoszewski, W., Helmens, K. F., Huntley, B., Kondratienė, O., Kalniņa, L., Kupryjanowicz, M., Malkiewicz, M., Milner, A. M., Nita, M. & 8 others, Noryśkiewicz, B., Pidek, I. A., Reille, M., Salonen, S., Šeirienė, V., Winter, H., Tzedakis, P. C. & Birks, J. B., Jan 2020, In : Vegetation History and Archaeobotany. 29, 1, p. 101-109 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Eemian
turnover
pollen
vegetation
Southern European region

Statement on advancing the assessment of chemical mixtures and their risks for human health and the environment

Drakvik, E., Altenburger, R., Aoki, Y., Backhaus, T., Bahadori, T., Barouki, R., Brack, W., Cronin, M. T. D., Demeneix, B., Hougaard Bennekou, S., van Klaveren, J., Kneuer, C., Kolossa-Gehring, M., Lebret, E., Posthuma, L., Reiber, L., Rider, C., Rüegg, J., Testa, G., van der Burg, B. & 6 others, van der Voet, H., Warhurst, M., van de Water, B., Yamazaki, K., Öberg, M. & Bergman, Å., Jan 2020, In : Environment International. 134, 105267.

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
risk assessment
chemical
human health
regulatory framework
public health
2019

Agent-based modelling of socio-ecological systems: Models, projects and ontologies

Gotts, N. M., van Voorn, G. A. K., Polhill, J. G., de Jong, E., Edmonds, B., Hofstede, G. J. & Meyer, R., Dec 2019, In : Ecological Complexity. 40, B, 15 p.

Research output: Contribution to journalArticleAcademicpeer-review

modeling
project
transparency
analysis

An Integrated System for the Automated Recording and Analysis of Insect Behavior in T-maze Arrays

Jongsma, M. A., Thoen, H., Poleij, L. M., Wiegers, G. L., Goedhart, P. W., Dicke, M., Noldus, L. P. J. J. & Kruisselbrink, J. W., 29 Jan 2019, In : Frontiers in Plant Science. 10, 20.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
insect behavior
insects
statistics
Thysanoptera
leaves
2 Citations (Scopus)

A probabilistic approach for risk-benefit assessment of food substitutions: A case study on substituting meat by fish

Thomsen, S. T., de Boer, W., Pires, S. M., Devleesschauwer, B., Fagt, S., Andersen, R., Poulsen, M. & van der Voet, H., 1 Apr 2019, In : Food and Chemical Toxicology. 126, p. 79-96

Research output: Contribution to journalArticleAcademicpeer-review

risk-benefit analysis
Meats
Meat
Fish
Fishes

Author Correction: Climatic controls of decomposition drive the global biogeography of forest-tree symbioses

28 Jun 2019, In : Nature. 571, 7765, E8.

Research output: Contribution to journalComment/Letter to the editorAcademic

Symbiosis
Equipment and Supplies
Databases
Forestry
Ecology
Open Access
Attention Deficit Disorder with Hyperactivity
Biomarkers
Diet
Food
Research

Blackleg Detection in Potato Plants using Convolutional Neural Networks

Afonso, M. V., Blok, P. M., Polder, G., van der Wolf, J. M. & Kamp, J. A. L. M., 2019. 6 p.

Research output: Contribution to conferencePaperAcademicpeer-review

Open Access
neural networks
potatoes
tubers
Pectobacterium
Dickeya
18 Citations (Scopus)

Climatic controls of decomposition drive the global biogeography of forest-tree symbioses

Steidinger, B. S., Crowther, T. W., Liang, J., Van Nuland, M. E., Werner, G. D. A., Reich, P. B., Nabuurs, G., de-Miguel, S., Zhou, M., Picard, N., Herault, B., Zhao, X., Zhang, C., Routh, D., Peay, K. G., Herold, M., Decuyper, M., Avitabile, V., DeVries, B. R., Hengeveld, G. M. & 3 others, Poorter, L., Schelhaas, M. & Bongers, F., 15 May 2019, In : Nature. 569, 7756, p. 404-408

Research output: Contribution to journalLetterAcademicpeer-review

symbiosis
biogeography
decomposition
climate
biome
Open Access
Survivors
Life Style
Colorectal Neoplasms
Waist Circumference
Body Mass Index
1 Citation (Scopus)

Combining Crop Growth Modeling and Statistical Genetic Modeling to Evaluate Phenotyping Strategies

Bustos-Korts, D., Boer, M. P., Malosetti, M., Chapman, S., Chenu, K., Zheng, B. & van Eeuwijk, F. A., 27 Nov 2019, In : Frontiers in Plant Science. 10, 1491.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
phenotype
crops
prediction
production technology
yield components
2 Citations (Scopus)

Combining pedigree and genomic information to improve prediction quality: an example in sorghum

Velazco, J. G., Malosetti, M., Hunt, C. H., Mace, E. S., Jordan, D. R. & van Eeuwijk, F. A., 1 Jul 2019, In : Theoretical and Applied Genetics. 132, 7, p. 2055-2067 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Sorghum
Pedigree
pedigree
genomics
prediction

Conclusion

Wehrens, H. R. M. J. & Salek, R., 19 Aug 2019, Metabolomics: Practical Guide to Design and Analysis. Wehrens, R. & Salek, R. (eds.). 1st ed. New York: Chapman and Hall, 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

metabolomics
computer science
mathematics and statistics
chemistry
mass spectrometry

Construction of Genetic Linkage Maps in Multiparental Populations

Zheng, C., Boer, M. P. & van Eeuwijk, F. A., 1 Aug 2019, In : Genetics. 212, 4, p. 1031-1044 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genetic Linkage
Population
Quantitative Trait Loci
Software
Pedigree
1 Citation (Scopus)
resource
reciprocity
cooperative behavior
ecosystem services
cooperatives

Coupling DAD and MS data in untargeted metabolomics

Wehrens, H. R. M. J., Engel, J., van Treuren, R., de Vos, R., Haug, K. & Rocca-Serra, P., 2019.

Research output: Contribution to conferencePosterAcademic

Open Access

Deep learning based plant part detection

Chauhan, A., Afonso, M. V. & Barth, R., 27 Jul 2019, Book of Abstracts European Federation for Information Technology in Agriculture, Food and the Environment (EFITA) 2019. EFITA, p. 40-40 1 p.

Research output: Chapter in Book/Report/Conference proceedingAbstract

Deep learning
1 Citation (Scopus)

Detection of tomato flowers from greenhouse images using colorspace transformations

Afonso, M., Mencarelli, A., Polder, G., Wehrens, R., Lensink, D. & Faber, N., 1 Jan 2019, Progress in Artificial Intelligence: 19th EPIA Conference on Artificial Intelligence, EPIA 2019, Proceedings, Part I. Moura Oliveira, P., Novais, P. & Reis, L. P. (eds.). Springer Verlag, p. 146-155 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); no. LNAI 11804).

Research output: Chapter in Book/Report/Conference proceedingConference paper

Greenhouse
Tomato
Color Space
Greenhouses
Cameras

De variatie aan insecten in laagveenmoerassen: Het spectrum aan soortgroepen in verschillende habitattypen in Nederlandse laagveenmoerassen

Stam, J. M., Kleijn, D., te Beest, D., Ozinga, W. A., Schmidt, A. M., Noordam, A. P., Burgers, J., van Kats, R. J. M., Aukema, B., Lammertsma, D. R. & Siepel, H., 2019, Wageningen: Wageningen Environmental Research. 41 p. (Wageningen Environmental Research rapport; no. 2961)

Research output: Book/ReportReportProfessional

Open Access

Developing a stronger and better - tasting mushroom with unique features: An innovative multi-disciplinary approach

Baars, J., Mumm, R., Stijger, I., Engel, J. & Wehrens, R., 2019, Wageningen: Stichting Wageningen Research, Wageningen Plant Research, Business unit Plant Breeding. 36 p. (Rapport / Stichting Wageningen Research, Wageningen Plant Research, Business unit Plant Breeding; no. 2019-1)

Research output: Book/ReportReportProfessional

Open Access

Differently Pre-treated Alfalfa Silages Affect the in vitro Ruminal Microbiota Composition

Hartinger, T., Edwards, J. E., Gómez Expósito, R., Smidt, H., ter Braak, C. J. F., Gresner, N. & Südekum, K. H., 3 Dec 2019, In : Frontiers in Microbiology. 10, 2761.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Silage
Medicago sativa
Microbiota
Sucrose
Fermentation

Effects of abiotic variables on the survival of discarded bycatches in North Sea pulse-trawl fisheries

Schram, E., Goedhart, P. W. & Molenaar, P., May 2019, IJmuiden: Wageningen Marine Research. 32 p. (Wageningen Marine Research rapport; no. C040/19)

Research output: Book/ReportReportProfessional

Open Access

Effects of reduced crossover recombination on quantitative trait analysis

Wijnen, C. L., 2019, Wageningen: Wageningen University. 175 p.

Research output: Thesisinternal PhD, WU

1 Citation (Scopus)
Open Access
nontarget organism
safety assessment
nontarget organisms
potato
field experimentation
Open Access
safety assessment
endpoints
Zea mays
human health
Health

Equivalence Testing Approaches in Genetically Modified Organism Risk Assessment

Van Der Voet, H. & Paoletti, C., 14 Nov 2019, In : Journal of Agricultural and Food Chemistry. 67, 49, p. 13506-13508

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genetically Modified Organisms
Food Safety
Risk assessment
risk assessment
genetically modified organisms

Estimating disease prevalence from drug utilization data using the Random Forest algorithm

Slobbe, L. C. J., Füssenich, K., Wong, A., Boshuizen, H. C., Nielen, M. M. J., Polder, J. J., Feenstra, T. L. & Van Oers, H. A. M., Aug 2019, In : European Journal of Public Health. 29, 4, p. 615-621 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Drug Utilization
Area Under Curve
Chronic Disease
Enteritis
Proxy
1 Citation (Scopus)
Open Access
Nutrition Assessment
nutrition assessment
Food
Micronutrients
Cooking
1 Citation (Scopus)

Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley

Bustos-Korts, D., Dawson, I. K., Russell, J., Tondelli, A., Guerra, D., Ferrandi, C., Strozzi, F., Nicolazzi, E. L., Molnar-Lang, M., Ozkan, H., Megyeri, M., Miko, P., Çakır, E., Yakışır, E., Trabanco, N., Delbono, S., Kyriakidis, S., Booth, A., Cammarano, D., Mascher, M. & 7 others, Werner, P., Cattivelli, L., Rossini, L., Stein, N., Kilian, B., Waugh, R. & van Eeuwijk, F. A., Sep 2019, In : Plant Journal. 99, 6, p. 1172-1191

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Exome
Hordeum
field experimentation
barley
Climate Change
1 Citation (Scopus)
Open Access
Diet
Food
Social Adjustment
Surveys and Questionnaires
Food Quality
4 Citations (Scopus)

Forest decision support systems for the analysis of ecosystem services provisioning at the landscape scale under global climate and market change scenarios

Nordström, E-M., Nieuwenhuis, M., Başkent, E. Z., Biber, P., Black, K., Borges, J. G., Bugalho, M. N., Corradini, G., Corrigan, E., Eriksson, L. O., Felton, A., Forsell, N., Hengeveld, G., Hoogstra-Klein, M., Korosuo, A., Lindbladh, M., Lodin, I., Lundholm, A., Marto, M., Masiero, M. & 6 others, Mozgeris, G., Pettenella, D., Poschenrieder, W., Sedmak, R., Tucek, J. & Zoccatelli, D., Aug 2019, In : European Journal of Forest Research. 138, 4, p. 561-581

Research output: Contribution to journalArticleAcademicpeer-review

systems analysis
decision support systems
decision support system
ecosystem service
ecosystem services
1 Citation (Scopus)

From QTLs to Adaptation Landscapes: Using Genotype-To-Phenotype Models to Characterize G×E Over Time

Bustos-Korts, D., Malosetti, M., Chenu, K., Chapman, S., Boer, M. P., Zheng, B. & van Eeuwijk, F. A., 4 Dec 2019, In : Frontiers in Plant Science. 10, 1540.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
quantitative trait loci
phenotype
genotype
wheat
crop models

General Framing of Low-, Mid-, and High-Level Data Fusion With Examples in the Life Sciences

Smolinska, A., Engel, J., Szymanska, E., Buydens, L. & Blanchet, L., 2019, Data Fusion Methodology and Applications. Elsevier Ltd, Academic Press, p. 51-79 29 p. (Data Handling in Science and Technology; vol. 31).

Research output: Chapter in Book/Report/Conference proceedingChapter

Life sciences
Data Fusion
Data fusion
Modality
Spectrometry
1 Citation (Scopus)

Genome-wide association study for kernel composition and flour pasting behavior in wholemeal maize flour

Alves, M. L., Carbas, B., Gaspar, D., Paulo, M., Brites, C., Mendes-Moreira, P., Brites, C. M., Malosetti, M., Van Eeuwijk, F. & Vaz Patto, M. C., 2 Apr 2019, In : BMC Plant Biology. 19, 1, 123.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
whole grain flour
corn flour
pasting properties
flour
corn
1 Citation (Scopus)

Genomic Prediction of Grain Yield and Drought-Adaptation Capacity in Sorghum Is Enhanced by Multi-Trait Analysis

Velazco, J. G., Jordan, D. R., Mace, E. S., Hunt, C. H., Malosetti, M. & van Eeuwijk, F. A., 31 Jul 2019, In : Frontiers in Plant Science. 10, 997.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
grain yield
drought
genomics
prediction
pedigree

Genomic prediction of maize yield across European environmental conditions

Millet, E. J., Kruijer, W., Coupel-Ledru, A., Alvarez Prado, S., Cabrera-Bosquet, L., Lacube, S., Charcosset, A., Welcker, C., van Eeuwijk, F. & Tardieu, F., 20 May 2019, In : Nature Genetics. 51, p. 952-956

Research output: Contribution to journalLetterAcademicpeer-review

Zea mays
Genotype
Benchmarking
Climate
Genome

Glucosinolate variability between turnip organs during development

Bonnema, G., Lee, J. G., Shuhang, W., Lagarrigue, D., Bucher, J., Wehrens, R., De Vos, R. & Beekwilder, J., 1 Jun 2019, In : PLoS ONE. 14, 6, e0217862.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Glucosinolates
Brassica napus
turnips
glucosinolates
tubers
Open Access
emissions factor
wood products
greenhouse gases
Netherlands
wetlands

High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow

Vanderzande, S., Howard, N. P., Cai, L., Da Silva Linge, C., Antanaviciute, L., Bink, M. C. A. M., Kruisselbrink, J. W., Bassil, N., Gasic, K., Iezzoni, A., Van de Weg, E. & Peace, C., 27 Jul 2019, In : PLoS ONE. 14, 6, e0210928.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
outbreeding
Workflow
Malus
Prunus avium
Diploidy

Importance of details in food descriptions in estimating population nutrient intake distributions

Zhang, L., Geelen, A., Boshuizen, H. C., Ferreira, J. & Ocké, M. C., 15 Mar 2019, In : Nutrition Journal. 18, 1, 17.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Food
Population
Interviews
Databases
Energy Intake

Integrated multi-omics approach reveals a role of ALDH1A1 in lipid metabolism in human colon cancer cells

Charkoftaki, G., Thompson, D. C., Golla, J. P., Garcia-Milian, R., Lam, T. T., Engel, J. & Vasiliou, V., 1 May 2019, In : Chemico-Biological Interactions. 304, p. 88-96

Research output: Contribution to journalArticleAcademicpeer-review

4 Citations (Scopus)

Lack of adverse effects in subchronic and chronic toxicity/carcinogenicity studies on the glyphosate-resistant genetically modified maize NK603 in Wistar Han RCC rats

Steinberg, P., van der Voet, H., Goedhart, P. W., Kleter, G., Kok, E. J., Pla, M., Nadal, A., Zeljenková, D., Aláčová, R., Babincová, J., Rollerová, E., Jaďuďová, S., Kebis, A., Szabova, E., Tulinská, J., Líšková, A., Takácsová, M., Mikušová, M. L., Krivošíková, Z., Spök, A. & 12 others, Racovita, M., de Vriend, H., Alison, R., Alison, C., Baumgärtner, W., Becker, K., Lempp, C., Schmicke, M., Schrenk, D., Pöting, A., Schiemann, J. & Wilhelm, R., Apr 2019, In : Archives of Toxicology. 93, 4, p. 1095-1139

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
glyphosate
Zea mays
Toxicity
Rats
Genetically modified plants
1 Citation (Scopus)

Linking Probabilistic Exposure and Pharmacokinetic Modeling to Assess the Cumulative Risk from the Bisphenols BPA, BPS, BPF, and BPAF for Europeans

Karrer, C., De Boer, W., Delmaar, C., Cai, Y., Crépet, A., Hungerbühler, K. & Von Goetz, N., 11 Jul 2019, In : Environmental Science and Technology. 53, 15, p. 9181-9191

Research output: Contribution to journalArticleAcademicpeer-review

Pharmacokinetics
modeling
Endocrine Disruptors
food
Dust

Measurement Technologies

Yanes, O., Hollywood, K., Mumm, R., Vinaixa, M., Rankin, N., Wehrens, H. R. M. J. & Salek, R., 19 Aug 2019, Metabolomics: Practical Guide to Design and Analysis. Wehrens, R. & Salek, R. (eds.). 1st ed. New York: Chapman and Hall, 38 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mass spectrometry
Capillary electrophoresis
Liquid chromatography
Metabolites
Ultraviolet spectroscopy

Metabolomics: Practical Guide to Design and Analysis

Wehrens, H. R. M. J. (ed.) & Salek, R. (ed.), 19 Aug 2019, 1st ed. New York: Chapman and Hall. 290 p.

Research output: Book/ReportBook editingAcademic

Nutrition
Medicine
Molecular biology
Data handling
Bioelectric potentials
7 Citations (Scopus)

Modeling water quality in the Anthropocene: directions for the next-generation aquatic ecosystem models

Mooij, W. M., van Wijk, D., Beusen, A. H. W., Brederveld, R. J., Chang, M., Cobben, M. M. P., DeAngelis, D. L., Downing, A. S., Janssen, A. B. G. & Hengeveld, G. M., Feb 2019, In : Current Opinion in Environmental Sustainability. 36, p. 85-95

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
aquatic ecosystem
water quality
water
ecosystem
modeling

Modelling aggregate exposure to pesticides from dietary and crop spray sources in UK residents

Kennedy, M. C., Garthwaite, D. G., de Boer, W. J. & Kruisselbrink, J. W., Apr 2019, In : Environmental Science and Pollution Research. 26, 10, p. 9892-9907

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pesticides
spray
Crops
pesticide
crop
15 Citations (Scopus)

Modelling strategies for assessing and increasing the effectiveness of new phenotyping techniques in plant breeding

van Eeuwijk, F. A., Bustos-Korts, D., Millet, E. J., Boer, M. P., Kruijer, W., Thompson, A., Malosetti, M., Iwata, H., Quiroz, R., Kuppe, C., Muller, O., Blazakis, K. N., Yu, K., Tardieu, F. & Chapman, S. C., May 2019, In : Plant Science. 282, p. 23-39

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
plant breeding
Genotype
phenotype
Single Nucleotide Polymorphism
Plant Physiological Phenomena

Modelling the spatial dynamics of Maui dolphins using individual-based models

de Jager, M., Hengeveld, G. M., Mooij, W. M. & Slooten, E., 24 Jun 2019, In : Ecological Modelling. 402, p. 59-65

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
individual-based model
dolphin
endangered species
modeling
gillnet