Research Output 2003 2017

2017
63 Citations (Scopus)

A gapless genome sequence of the fungus Botrytis cinerea

Van Kan, J. A. L., Stassen, J. H. M., Mosbach, A., Van Der Lee, T. A. J., Faino, L., Farmer, A. D., Papasotiriou, D. G., Zhou, S., Seidl, M. F., Cottam, E., Edel, D., Hahn, M., Schwartz, D. C., Dietrich, R. A., Widdison, S. & Scalliet, G., 2017, In : Molecular Plant Pathology. 18, 1, p. 75-89

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Botrytis
Botrytis cinerea
Untranslated Regions
chromosome
Fungi
20 Citations (Scopus)

Cascading effects of predator activity on tick-borne disease risk

Hofmeester, T. R., Jansen, P. A., Wijnen, H. J., Coipan, E. C., Fonville, M., Prins, H. H. T., Sprong, H. & van Wieren, S. E., 2017, In : Proceedings of the Royal Society. B: Biological Sciences. 284, 1859, 20170453.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tick-Borne Diseases
tick-borne diseases
tick
Nymph
Rodentia
1 Citation (Scopus)

Development of a molecular assay for the detection of Cucumber mosaic virus and the discrimination of its subgroups I and II

Bald-Blume, N., Bergervoet, J. H. W. & Maiss, E., 2017, In : Journal of Virological Methods. 243, p. 35-43

Research output: Contribution to journalArticleAcademicpeer-review

Cucumovirus
Technology
Plant Viruses
Nucleic Acid Databases
Capsid Proteins
3 Citations (Scopus)

Development of a molecular assay for the general detection of tospoviruses and the distinction between tospoviral species

Bald-Blume, N., Bergervoet, J. H. W. & Maiss, E., 2017, In : Archives of Virology. 162, 6, p. 1519-1528

Research output: Contribution to journalArticleAcademicpeer-review

Tospovirus
Viruses
Citrullus
Hypochromic Anemia
Capsicum
10 Citations (Scopus)

Fungal communities including plant pathogens in near surface air are similar across northwestern Europe

Nicolaisen, M., West, J. S., Sapkota, R., Canning, G. G. M., Schoen, C. & Justesen, A. F., 2017, In : Frontiers in Microbiology. 8, SEP, 1729.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Air
Fungal Spores
Fungi
5 Citations (Scopus)

Targeting trichothecene biosynthetic genes

Wei, S., van der Lee, T., Verstappen, E., van Gent, M. & Waalwijk, C., 2017, Mycotoxigenic Fungi: Methods and Protocols. Humana Press Inc., p. 173-189 (Methods in Molecular Biology; vol. 1542).

Research output: Chapter in Book/Report/Conference proceedingChapter

Trichothecenes
Polymerase Chain Reaction
Biomass
Genes
Intergenic DNA
2016
6 Citations (Scopus)

A single-nucleotide-polymorphism-based genotyping assay for simultaneous detection of different carbendazim-resistant genotypes in the Fusarium graminearum species complex

Zhang, H., Brankovics, B., van der Lee, T. A. J., Waalwijk, C., van Diepeningen, A. A. D., Xu, J., Xu, J., Chen, W. & Feng, J., 2016, In : PeerJ. 2016, 10, e2609.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
carbendazim
Carbamates
Fusarium graminearum
Fusarium
Polymorphism
25 Citations (Scopus)

Associations between Fusarium species and mycotoxins in oats and spring wheat from farmers fields in Norway over a six-year period

Hofgaard, I. S., Aamot, H. U., Torp, T., Jestoi, M., Lattanzio, V. M. T., Klemsdal, S. S., Waalwijk, C., van der Lee, T. & Brodal, G., 2016, In : World Mycotoxin Journal. 9, 3, p. 365-378

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Mycotoxins
Fusarium
Norway
spring wheat
mycotoxins
25 Citations (Scopus)

Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control

Arango Isaza, R. E., Diaz-Trujillo, C., Dhillon, B., Aerts, A., Carlier, J., Crane, C. F., V. de Jong, T., de Vries, I., Dietrich, R., Farmer, A. D., Fortes Fereira, C., Garcia, S., Guzman, M., Hamelin, R. C., Lindquist, E. A., Mehrabi, R., Quiros, O., Schmutz, J., Shapiro, H., Reynolds, E. & 10 others, Scalliet, G., Souza, M., Stergiopoulos, I., van der Lee, T. A. J., de Wit, P. J. G. M., Zapater, M. F., Zwiers, L. H., Grigoriev, I. V., Goodwin, S. B. & Kema, G. H. J., 2016, In : Plos Genetics. 12, 8, e1005876.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
black Sigatoka
Mycosphaerella fijiensis
Musa
disease control
bananas
26 Citations (Scopus)

Computational strategies for genome-based natural product discovery and engineering in fungi

van der Lee, T. A. J. & Medema, M. H., 2016, In : Fungal Genetics and Biology. 89, p. 29-36

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Biological Products
Multigene Family
Fungi
Genome
Biosynthetic Pathways
6 Citations (Scopus)

Crops are a main driver for species diversity and the toxigenic potential of Fusarium isolates in maize ears in China

Zhang, H., Brankovics, B., Xu, J., Xu, J. S., Guo, C., Guo, J. G., Jin, S. J., Chen, W. Q., Feng, J., van Diepeningen, A. D., van der Lee, T. A. J. & Waalwijk, C., 2016, In : World Mycotoxin Journal. 9, 5, p. 701-715

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
corn ears
Biodiversity
Fusarium
Fumonisins
Zea mays

Detection of a non-described virus in Dracaena surculosa?

de Krom, C. E., Verhoeven, J. T. J., Dullemans, A. M., van der Vlugt, R. A. A. & Roenhorst, J. W., 2016.

Research output: Contribution to conferencePosterAcademic

15 Citations (Scopus)

Development and application of loop-mediated isothermal amplification (LAMP) for detection of Plasmopara viticola

Kong, X., Qin, W., Xiaoqing, X., Kong, F., Schoen, C. D., Feng, J., Wang, Z. & Zhang, H., 2016, In : Scientific Reports. 6, 9 p., 28935.

Research output: Contribution to journalArticleAcademicpeer-review

Plasmopara viticola
sporangia
grapes
downy mildew
assays
7 Citations (Scopus)

Development of Polymorphic Microsatellite Loci for Potato Wart from Next-Generation Sequence Data

Gagnon, M. C., van der Lee, T. A. J., Bonants, P. J. M., Smith, D. S., Xiang, L., Lévesque, A. & Bilodeau, G. J., 2016, In : Phytopathology. 106, 6, p. 636-644

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Synchytrium endobioticum
warts
potatoes
microsatellite repeats
loci
14 Citations (Scopus)
Open Access
Phytophthora infestans
Lycopersicon esculentum
Solanum tuberosum
powdery mildew
Arabidopsis
1 Citation (Scopus)

First Report of Cadophora luteo-olivacea Causing Side Rot on ‘Conference’ Pears in the Netherlands

Wenneker, M., Pham, K. T. K., Lemmers, M. E. C., de Boer, A., van Leeuwen, P., Hollinger, T. C., de Haas, B. H. & Köhl, J., 2016, In : Plant Disease. 100, 10, p. 2162

Research output: Contribution to journalArticleAcademicpeer-review

Cadophora
pears
Netherlands
agar
lesions (plant)
2 Citations (Scopus)

Generation of tomato seeds artificially infected with a GFP – tagged strain of Clavibacter michiganensis subsp. michiganensis

Ribeiro, D. H., Souza, R. M. & van der Wolf, J. M., 2016, In : Seed Science and Technology. 44, 3, p. 486-499

Research output: Contribution to journalArticleAcademicpeer-review

Clavibacter michiganensis subsp. michiganensis
tomatoes
seeds
bacterial wilt
stems
13 Citations (Scopus)

GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research

Brankovics, B., Zhang, H., van Diepeningen, A. D., van der Lee, T. A. J., Waalwijk, C. & de Hoog, G. S., 1 Jun 2016, In : PLoS Computational Biology. 12, 6, e1004753.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
baiting
Mitochondrial Genome
Niche
Sequence Homology
Ribosomal DNA
30 Citations (Scopus)

Impact of Bacterial-Fungal Interactions on the Colonization of the Endosphere

van Overbeek, L. S. & Saikkonen, K., 2016, In : Trends in Plant Science. 21, 3, p. 230-242

Research output: Contribution to journalArticleAcademicpeer-review

endophytes
microorganisms
biofilm
plant pathogens
plant tissues
11 Citations (Scopus)

Latitudinal diversity of culex pipiens biotypes and hybrids in farm, peri-Urban, and wetland habitats in Europe

Vogels, C. B. F., Mohlmann, T., Melsen, D., Favia, G., Wennergren, U. & Koenraadt, S., 2016, In : PLoS ONE. 11, 11, 10 p., e0166959.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Culex
Culex pipiens
Wetlands
biotypes
Viruses
21 Citations (Scopus)

Living apart together: Crosstalk between the core and supernumerary genomes in a fungal plant pathogen

Vanheule, A., Audenaert, K., Warris, S., van de Geest, H., Schijlen, E., Höfte, M., De Saeger, S., Haesaert, G., Waalwijk, C. & van der Lee, T., 2016, In : BMC Genomics. 17, 18 p., 670.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genome
DNA Transposable Elements
Chromosomes
Gene Duplication
Fungi

Maintenance of Borrelia burgdorferi s.l. diversity in enzootic cycles

Swart-Coipan, E., 2016, Wageningen: Wageningen University. 180 p.

Research output: Thesisinternal PhD, WU

Open Access
Borrelia burgdorferi
ticks
Borrelia afzelii
Borrelia
Lyme disease
5 Citations (Scopus)

Multiplex detection and identification of Phytophthora spp. using target-specific primer extension and Luminex xTAG technology

Kostov, K., Verstappen, E. C. P., Bergervoet, J. H. W., de Weerdt, M., Schoen, C. D., Slavov, S. & Bonants, P. J. M., 2016, In : Plant Pathology. 65, 6, p. 1008-1021

Research output: Contribution to journalArticleAcademicpeer-review

Phytophthora
Technology
microbial detection
methodology
DNA
1 Citation (Scopus)

Q-collect: results of a European Union project to improve the status of reference collections important for plant health

Bonants, P., Streito, J. C., Elphinstone, J., Pottier, P., Robert, V., Bluemel, S., van der Blom, M., Gentit, P., de Vos, P. & Petter, F., 2016, In : EPPO Bulletin. 46, 2, p. 348-358

Research output: Contribution to journalArticleAcademicpeer-review

plant health
European Union
plant pests
plant products
certification

Ringspots in Phalaenopsis, is there a role for a putative new virus?

Meekes, E., Dullemans, A. M., Hooftman, R., Gawehns, F., Ebskamp, M., Verbeek, M., van der Vlugt, R. A. A. & van der Lee, T. A. J., 2016.

Research output: Contribution to conferencePosterAcademic

24 Citations (Scopus)

The geographic distribution and complex evolutionary history of the NX-2 trichothecene chemotype from Fusarium graminearum

Kelly, A., Proctor, R. H., Belzile, F., Chulze, S. N., Clear, R. M., Cowger, C., Elmer, W., Lee, T., Obanor, F., Waalwijk, C. & Ward, T. J., 2016, In : Fungal Genetics and Biology. 95, p. 39-48

Research output: Contribution to journalArticleAcademicpeer-review

Fusarium
Trichothecenes
Canada
Genes
Gene Targeting

Torradoviruses

Verbeek, M., Dullemans, A. M. & van der Vlugt, R. A. A., 2016, Vector-Mediated Transmission of Plant Pathogens. Brown, J. K. (ed.). APS Press, p. 431-434

Research output: Chapter in Book/Report/Conference proceedingChapter

Torradovirus
Aleyrodidae
Tomato torrado virus
viruses
stylets

Training morfologische kenmerken van de kleine bijenkastkever

Cornelissen, A. C. M. & Hendriks, M. J. A., 23 Jan 2016, 9 p. Wageningen UR.

Research output: Other contributionPamphlet

Open Access
2015
6 Citations (Scopus)
Synchytrium endobioticum
pathotypes
quantitative polymerase chain reaction
assays
genetic polymorphism
29 Citations (Scopus)

Bacterial Canker of Tomato: Current Knowledge of Detection, Management, Resistance, and Interactions

Sen, Y., van der Wolf, J. M., Visser, R. G. F. & van Heusden, A. W., 2015, In : Plant Disease. 99, 1, p. 4-13

Research output: Contribution to journalArticleAcademicpeer-review

Clavibacter
resistance management
Clavibacter michiganensis subsp. michiganensis
tomatoes
virulence

Bacterieziekten in de bloemisterij

Slootweg, G., Dijkema, M. H. G. E., van der Wolf, J. M., Meekes, E. & Westerhof, J., 2015, Lisse: Praktijkonderzoek Plant en Omgeving BBF. 59 p.

Research output: Book/ReportReportProfessional

Open Access
79 Citations (Scopus)

Biogeography of Fusarium graminearum species complex and chemotypes: a review

van der Lee, T. A. J., Zhang, H., Diepeningen, A. & Waalwijk, C., 2015, In : Food Additives & Contaminants. Pt. A, Chemistry, Analysis, Control, Exposure & Risk Assessment. 32, 4, p. 453-460

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
trichothecenes
chemotypes
Fusarium graminearum
Fusarium
Trichothecenes
1 Citation (Scopus)

CATT: A new and non-chemical pest and nematode control method in strawberry planting stock

Van Kruistum, G., Evenhuis, A., Hoek, J., Kastelein, P., Van Der Wolf, J. M. & Verschoor, J. A., 2015, In : Acta Horticulturae. 1105, p. 189-196

Research output: Contribution to journalArticleAcademicpeer-review

nematode control
pest control
strawberries
control methods
planting

Corrigendum to "Proteome catalog of Zymoseptoria tritici captured during pathogenesis in wheat". [Fung. Genet. Biol. 79 (2015) 42-53]

Ben Mbarek, S., Cordewener, J. H. G., Van der Lee, T. A. J., America, A. H. P., Gohari, A. M., Mehrabi, R., Hamza, S., de Wit, P. J. G. M. & Kema, G., 2015, In : Fungal Genetics and Biology. 82, p. 291

Research output: Contribution to journalArticleAcademic

Detectie en bestrijding van wol- en schildluis in de sierteelt onder glas

Messelink, G. J., Leman, A., Vijverberg, R., Kruidhof, H. M., Woning, J., de Bruin, A., Mumm, R. & de Kogel, W. J., 2015, Wageningen UR Glastuinbouw. 52 p. (Rapport GTB; no. 1339)

Research output: Book/ReportReportProfessional

Open Access
57 Citations (Scopus)

Detection, identification and differentiation of Pectobacterium and Dickeya species causing potato blackleg and tuber soft rot: a review

Czajkowski, R. L., Pérombelon, M. C. M., Jafra, S., Lojkowska, E., Potrykus, M., van der Wolf, J. M. & Sledz, W., 2015, In : Annals of Applied Biology. 166, 1, p. 18-38

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pectobacterium
Dickeya
tubers
potatoes
Enterobacteriaceae
25 Citations (Scopus)

Diagnosis of Fusarium Infections: Approaches to Identification by the Clinical Mycology Laboratory

van Diepeningen, A. D., Brankovics, B., Iltes, J., van der Lee, T. A. J. & Waalwijk, C., 1 Jul 2015, In : Current Fungal Infection Reports. 9, 3, p. 135-143

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Fusariosis
Mycology
Fusarium
Cellular Structures
Cell Wall

DNA-diagnostiek maakt fytosanitaire controles beter en sneller : hightech gereedschap voor inspectie- en keuringsdiensten

van Staalduinen, J. & Bonants, P. J. M., 2015, In : Onder Glas. 12, 6/7, p. 48-49

Research output: Contribution to journalArticleProfessional

Open Access
32 Citations (Scopus)

Effector discovery in the fungal wheat pathogen Zymoseptoria tritici

Mirzadi Gohari, A., Ware, S. B., Wittenberg, A. H. J., Mehrabi, R., Ben M'Barek, S., Verstappen, E. C. P., van der Lee, T. A. J., Robert, O., Schouten, H. J., de Wit, P. J. G. M. & Kema, G. H. J., 2015, In : Molecular Plant Pathology. 16, 9, p. 931-945

Research output: Contribution to journalArticleAcademicpeer-review

Mycosphaerella graminicola
Quantitative Trait Loci
Triticum
pathogenesis
pathogen
10 Citations (Scopus)

First report of southern Tomato virus in tomato in the Canary Islands, Spain

Verbeek, M., Dullemans, A. M., Espino, A., Botella, M., Alfaro-Fernández, A. & Font, M. I., 2015, In : Journal of Plant Pathology: rivista di patologia vegetale. 97, 2, p. 392-392

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Canary Islands
Spain
tomatoes
viruses
Pepino mosaic virus
10 Citations (Scopus)

FPLC and liquid-chromatography mass spectrometry identify candidate necrosis-inducing proteins from culture filtrates of the fungal wheat pathogen Zymoseptoria tritici

Ben M'Barek, S., Cordewener, J. H. G., Tabib Ghaffary, M. S., van der Lee, T. A. J., Liu, Z., Mirzadi Gohari, A., Mehrabi, R., America, A. H. P., Friesen, T. L., Hamza, S., Stergiopoulos, I., de Wit, P. J. G. M. & Kema, G. H. J., 2015, In : Fungal Genetics and Biology. 79, p. 54-62

Research output: Contribution to journalArticleAcademicpeer-review

Liquid Chromatography
Triticum
Mass Spectrometry
Necrosis
Endopeptidase K

Fusarium oxysporum mitochondria in the next generation sequencing era

van Diepeningen, A. D., van der Lee, T. A. J., Waalwijk, C. & de Hoog, S., 2015, In : Gewasbescherming. 46, 1, p. 15

Research output: Contribution to journalArticleProfessional

Open Access
7 Citations (Scopus)

Genetic mapping of resistance to Fusarium oxysporum f. sp. tulipae in tulip

Tang, N., van der Lee, T. A. J., Shahin, A., Holdinga, M. R., Bijman, P. J. J., Caser, M., Visser, R. G. F., van Tuyl, J. M. & Arens, P., 2015, In : Molecular Breeding. 35, 17 p., 122.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Tulipa
Fusarium
Fusarium oxysporum
chromosome mapping
linkage groups
5 Citations (Scopus)

Host range and symptomatology of Pepino mosaic virus strains occurring in Europe

Blystad, D. R., van der Vlugt, R., Alfaro-Fernández, A., del Carmen Córdoba, M., Bese, G., Hristova, D., Pospieszny, H., Mehle, N., Ravnikar, M., Tomassoli, L., Varveri, C. & Nielsen, S. L., 2015, In : European Journal of Plant Pathology. 143, 1, p. 43-56

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pepino mosaic virus
host range
alternative hosts
tomatoes
eggplants

Inoculum sources of the post-harvest pathogens Neofabraea spp. and Cadophora spp. in Dutch apple and pear orchards

Köhl, J., Wenneker, M., de Haas, B. H., Anbergen, R. H. N., Plas, C. H. & Kastelein, P., 2015, p. 288-288.

Research output: Contribution to conferenceAbstractAcademic

Neofabraea
Cadophora
pears
inoculum
orchards
22 Citations (Scopus)

Interaction between Varroa destructor and imidacloprid reduces flight capacity of honeybees

Blanken, L., van Langevelde, F. & van Dooremalen, J. A., 2015, In : Proceedings of the Royal Society. B: Biological Sciences. 282, 1820, 9 p., 20151738.

Research output: Contribution to journalArticleAcademicpeer-review

Varroidae
Varroa destructor
imidacloprid
honeybee
Insecticides