Fingerprint Dive into the research topics where Bioinformatics is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.

Genome Medicine & Life Sciences
Multigene Family Medicine & Life Sciences
Genes Chemical Compounds
genome Agriculture & Biology
Biological Products Medicine & Life Sciences
genes Agriculture & Biology
Arabidopsis Medicine & Life Sciences
Lycopersicon esculentum Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Profiles

Photo of Mehmet Akdel

Mehmet Akdel, MSc

Person: PhD-student

20162016
Photo of Mohammad Alanjary

Mohammad Alanjary, PhD

Person: Postdoc

20182020
Photo of Miguel Correa Marrero

Miguel Correa Marrero, MSc

Person: Other

20152019

Research Output 2000 2020

Mass spectrometry searches using MASST

Wang, M., Jarmusch, A. K., Vargas, F., Aksenov, A. A., Gauglitz, J. M., Weldon, K., Petras, D., da Silva, R., Quinn, R., Melnik, A. V., van der Hooft, J. J. J., Caraballo-Rodríguez, A. M., Nothias, L. F., Aceves, C. M., Panitchpakdi, M., Brown, E., Di Ottavio, F., Sikora, N., Elijah, E. O., Labarta-Bajo, L. & 16 others, Gentry, E. C., Shalapour, S., Kyle, K. E., Puckett, S. P., Watrous, J. D., Carpenter, C. S., Bouslimani, A., Ernst, M., Swafford, A. D., Zúñiga, E. I., Balunas, M. J., Klassen, J. L., Loomba, R., Knight, R., Bandeira, N. & Dorrestein, P. C., 1 Jan 2020, In : Nature Biotechnology. 38, p. 23-26 4 p.

Research output: Contribution to journalLetterAcademicpeer-review

MIBiG 2.0: a repository for biosynthetic gene clusters of known function

Kautsar, S. A., Blin, K., Shaw, S., Navarro Munoz, J. C., Terlouw, B., van der Hooft, J. J. J., Van Santen, J. A., Tracanna, V., Suarez Duran, H., Pascal Andreu, V., Selem Mojica, N., Alanjary, M., Robinson, S., Lund, G., Epstein, S. C., Sisto, A. C., Charkoudian, L. K., Collemare, J., Linington, R. G., Weber, T. & 1 others, Medema, M. H., 8 Jan 2020, In : Nucleic acids research. 48, D1, p. D454-D458

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Multigene Family
Microbial Genome
Chemical Databases
Data Mining
Explosions

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

Gauglitz, J. M., Aceves, C. M., Aksenov, A. A., Aleti, G., Almaliti, J., Bouslimani, A., Brown, E. A., Campeau, A., Caraballo-Rodríguez, A. M., Chaar, R., da Silva, R. R., Demko, A. M., Di Ottavio, F., Elijah, E., Ernst, M., Ferguson, L. P., Holmes, X., Jarmusch, A. K., Jiang, L., Kang, K. B. & 27 others, Koester, I., Kwan, B., Li, J., Li, Y., Melnik, A. V., Molina-Santiago, C., Ni, B., Oom, A. L., Panitchpakdi, M. W., Petras, D., Quinn, R., Sikora, N., Spengler, K., Teke, B., Tripathi, A., Ul-Hasan, S., van der Hooft, J. J. J., Vargas, F., Vrbanac, A., Vu, A. Q., Wang, S. C., Weldon, K., Wilson, K., Wozniak, J. M., Yoon, M., Bandeira, N. & Dorrestein, P. C., 1 Jan 2020, In : Food Chemistry. 302, 125290.

Research output: Contribution to journalArticleAcademicpeer-review

Processed foods
Food and Beverages
raw foods
Metabolomics
Beverages

Projects 2005 2021

Datasets

Single-molecule protein sequencing through fingerprinting: computational assessment

Yao, Y. (Creator), Docter, M. W. (Creator), van Ginkel, H. G. T. M. (Creator), de Ridder, D. (Creator), Joo, C. (Creator), Delft University of Technology, 19 Jan 2018

Dataset

Beauveria bassiana Genome sequencing and assembly

Valero Jimenez, C. A. (Creator), Faino, L. (Creator), Spring in 'T Veld, D. (Creator), Smit, S. (Creator), Zwaan, B. (Creator), van Kan, J. (Creator), Wageningen University, 8 Jul 2016

Dataset

Activities 2017 2018

Predicting variant deleteriousness in non-human species: taking CADD approach to pig

Christian Gross (Speaker)
12 Dec 2018

Activity: Talk or presentationOral presentation

A community-driven paired data platform to accelerate natural product mining

J.J.J. van der Hooft (Speaker)
12 Dec 2018

Activity: Talk or presentationOral presentation

Identification of Deleterious Alleles in Poultry

M.F.L. Derks (Contributor), M. Bosse (Speaker), H.J.W.C. Megens (Contributor), D. de Ridder (Contributor), Marcel J.T. Reinders (Contributor), Christian Gross (Contributor), M. Groenen (Contributor)
15 Jan 2017

Activity: Talk or presentationOral presentation

Press / Media

Software speeds up search for new antibiotics

Marnix Medema

5/12/19

2 Media contributions

Press/Media: Research

Steeds meer kennis over DNA beschikbaar

Roeland van Ham

1/01/09

1 item of Media coverage

Press/Media: Expert Comment