Research output per year
Research output per year
Fingerprint
Dive into the research topics where Bioinformatics is active. These topic labels come from the works of this organisation's members. Together they form a unique fingerprint.
Network
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Profiles
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An isotopic labeling approach linking natural products with biosynthetic gene clusters
McCaughey, C. S., van Santen, J. A., van der Hooft, J. J. J., Medema, M. H. & Linington, R. G., Mar 2022, In: Nature Chemical Biology. 18, 3, p. 295-304Research output: Contribution to journal › Article › Academic › peer-review
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Comprehensive Genome Analysis of Halolamina pelagica CDK2: Insights into Abiotic Stress Tolerance Genes
Gaba, S., Naitam, M. G., Kumari, A., Medema, M. H. & Kaushik, R., Mar 2022, In: Journal of Pure and Applied Microbiology. 16, 1, p. 460-470Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Discovery and biosynthesis of cyclic plant peptides via autocatalytic cyclases
Chigumba, D. N., Mydy, L. S., de Waal, F., Li, W., Shafiq, K., Wotring, J. W., Mohamed, O. G., Mladenovic, T., Tripathi, A., Sexton, J. Z., Kautsar, S., Medema, M. H. & Kersten, R. D., Jan 2022, In: Nature Chemical Biology. 18, 1, p. 18-28 11 p.Research output: Contribution to journal › Article › Academic › peer-review
3 Citations (Scopus)
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Virus Diversity and Genome Evolution in Natural plant Ecosystems
Baijens, J., Kupczok, A. & de Ridder, D.
1/11/21 → …
Project: PhD
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Pangenome mining for quarantine organisms
Pardeshi, L., Smit, S., de Ridder, D. & van der Lee, T.
21/10/21 → …
Project: PhD
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Datasets
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Profile hidden Markov models trained on aligned KEGG Orthology sequences for enzyme annotation
Rodenburg, Y. A. (Creator), de Ridder, D. (Contributor), Govers, F. (Contributor) & Seidl, M. (Creator), Wageningen University & Research, 7 Oct 2019
DOI: 10.4121/uuid:9b6e6aa0-b815-409f-9e96-04828b03290b
Dataset
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Single-molecule protein sequencing through fingerprinting: computational assessment
Yao, Y. (Creator), Docter, M. W. (Creator), van Ginkel, H. G. T. M. (Creator), de Ridder, D. (Creator) & Joo, C. (Creator), Delft University of Technology, 19 Jan 2018
DOI: 10.4121/uuid:08a078fc-9d4c-44d1-88c9-9cb412b83a46
Dataset
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Indexed pPHRED summary scores
Gross, C. (Creator), Derks, M. (Creator), Megens, H. (Creator), Bosse, M. (Creator), Groenen, M. A. M. (Creator), Reinders, M. (Creator) & de Ridder, D. (Creator), Wageningen University & Research, 2020
http://www.bioinformatics.nl/pCADD/indexed_pPHRED-summary-scores/
Dataset
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6th Conference New Technologies in Agriculture.
Willem Jan Knibbe (Invited speaker), Dick de Ridder (Contributor) & Jene van der Heide (Contributor)
9 Dec 2021Activity: Talk or presentation › Oral presentation › Academic
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Digital Twins in the Living Environment
Dick de Ridder (Contributor), Jene van der Heide (Contributor) & Willem Jan Knibbe (Speaker)
1 Nov 2021Activity: Talk or presentation › Public lecture/debate/seminar › Academic
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From GWAS Peak to Causal Mutation; Utilizing p(ig)CADD Scores to Prioritize Sequence Variation
Martijn Derks (Speaker), Christian Gross (Contributor), M.S. Lopes (Contributor), M.J.T. Reinders (Contributor), Mirte Bosse (Contributor), Arne B. Gjuvsland (Contributor), Hendrik-Jan Megens (Contributor), Dick de Ridder (Contributor) & Martien Groenen (Contributor)
11 Jan 2020 → 15 Jan 2020Activity: Talk or presentation › Public lecture/debate/seminar › Other
Press / Media
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Searching for micro weapons factories
24/03/22 → 25/03/22
2 Media contributions
Press/Media: Research › Professional
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Finding new antibiotics: In 5 steps
4/11/21 → 5/11/21
2 Media contributions
Press/Media: Research › Professional
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The universal language of the molecule : interview
14/10/21 → 15/10/21
2 Media contributions
Press/Media: Expert Comment › Professional