Research Output 1969 2019

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Review article
2019
4 Citations (Scopus)

Alternative coenzymes for biocatalysis

Guarneri, A., van Berkel, W. J. H. & Paul, C. E., Dec 2019, In : Current Opinion in Biotechnology. 60, p. 63-71

Research output: Contribution to journalReview articleAcademicpeer-review

Biocatalysis
Coenzymes
Enzymes
Flavins
Chemical reactivity

Editorial: Actinobacteria, a source of biocatalytic tools

Tischler, D., Van Berkel, W. J. H. & Fraaije, M. W., 16 Apr 2019, In : Frontiers in Microbiology. 10, 809.

Research output: Contribution to journalReview articleAcademic

Open Access

Evolution, Initiation, and Diversity in Early Plant Embryogenesis

Radoeva, T., Vaddepalli, P., Zhang, Z. & Weijers, D., 9 Sep 2019, In : Developmental Cell. 50, 5, p. 533-543 11 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Arabidopsis
Embryonic Development
2018
19 Citations (Scopus)

Auxin Response Factors: Output control in auxin biology

Roosjen, M., Paque, S. & Weijers, D., 1 Jan 2018, In : Journal of Experimental Botany. 69, 2, p. 179-188

Research output: Contribution to journalReview articleAcademicpeer-review

Indoleacetic Acids
auxins
Biological Sciences
Transcription Factors
transcription factors
14 Citations (Scopus)
Open Access
Fungal Polysaccharides
Substrate Specificity
Mixed Function Oxygenases
Polysaccharides
Electrons
13 Citations (Scopus)

Evolution of nuclear auxin signaling: Lessons from genetic studies with basal land plants

Kato, H., Nishihama, R., Weijers, D. & Kohchi, T., 1 Jan 2018, In : Journal of Experimental Botany. 69, 2, p. 291-301

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Embryophyta
Indoleacetic Acids
embryophytes
auxins
Marchantia

Use of proteomics to detect sex-related differences in effects of toxicants: implications for using proteomics in toxicology

Rietjens, I. M. C. M., Vervoort, J., Maslowska-Górnicz, A., Van den Brink, N. & Beekmann, K., 14 Sep 2018, In : Critical Reviews in Toxicology. 48, 8, p. 666-681

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Sex Characteristics
Proteomics
Toxicology
Toxic Actions
Biomarkers
2017
24 Citations (Scopus)

Old yellow enzyme-catalysed asymmetric hydrogenation: Linking family roots with improved catalysis

Scholtissek, A., Tischler, D., Westphal, A. H., van Berkel, W. J. H. & Paul, C. E., 2017, In : Catalysts. 7, 5, 130.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
coenzymes
Coenzymes
NADPH Dehydrogenase
nicotinamide
Catalysis
2015
82 Citations (Scopus)

Building a plant: cell fate specification in the early Arabidopsis embryo

ten Hove, C. A., Lu, K-J. & Weijers, D., 2015, In : Development. 142, p. 420-430

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Plant Cells
Arabidopsis
Embryonic Development
Embryonic Structures
Stem Cells
9 Citations (Scopus)

Control of oriented cell division in the Arabidopsis embryo

van Dop, M., Liao, C. Y. & Weijers, D., 2015, In : Current Opinion in Plant Biology. 23, p. 25-30

Research output: Contribution to journalReview articleAcademicpeer-review

cell division
Arabidopsis
auxins
plant development
image analysis
2014
33 Citations (Scopus)

A roadmap to embryo identity in plants

Radoeva, T. M. & Weijers, D., 2014, In : Trends in Plant Science. 19, 11, p. 709-716

Research output: Contribution to journalReview articleAcademicpeer-review

embryo (plant)
embryogenesis
roads
microspores
seed development
172 Citations (Scopus)

Flavin dependent monooxygenases

Huijbers, M. M. E., Montersino, S., Westphal, A. H., Tischler, D. & van Berkel, W. J. H., 2014, In : Archives of Biochemistry and Biophysics. 544, p. 2-17

Research output: Contribution to journalReview articleAcademicpeer-review

Mixed Function Oxygenases
Biological Phenomena
Chemical Industry
Detoxification
Oxygenation
48 Citations (Scopus)

IL-10 encoded by viruses: a remarkable example of independent acquisition of a cellular gene by viruses and its subsequent evolution in the viral genome

Ouyang, P., Rakus, K., van Beurden, S. J., Westphal, A. H., Davison, A. J., Gatherer, D. & Vanderplasschen, A. F., 2014, In : Journal of General Virology. 95, 2, p. 245-262

Research output: Contribution to journalReview articleAcademicpeer-review

Viral Genome
Interleukin-10
Viruses
Viral Genes
Immunosuppressive Agents
16 Citations (Scopus)

Omics and modeling approaches approaches for understanding regulation of asymmetric cell divisions in Arabidopsis and other angiosperm plants.

Kajala, K., Ramakrishna, A., Fisher, A., Bergmann, D. C., De Smet, I., Sozzani, R., Weijers, D. & Brady, S. M., 2014, In : Annals of Botany. 113, 7, p. 1083-1105

Research output: Contribution to journalReview articleAcademicpeer-review

cell division
Angiospermae
Arabidopsis
cells
plant development
14 Citations (Scopus)

Prenatal plumbing – Vascular tissue formation in the plant embryo

De Rybel, B., Breda, A. S. & Weijers, D., 2014, In : Physiologia Plantarum. 151, 2, p. 126-133

Research output: Contribution to journalReview articleAcademicpeer-review

Sanitary Engineering
vascular tissues
blood vessels
embryo (plant)
Blood Vessels
2013
12 Citations (Scopus)

Auxin regulation of embryonic root formation

Yoshida, S., Saiga, S. & Weijers, D., 2013, In : Plant and Cell Physiology. 54, 3, p. 325-332

Research output: Contribution to journalReview articleAcademicpeer-review

Indoleacetic Acids
auxins
Plant Roots
Plant Growth Regulators
Meristem
54 Citations (Scopus)

Mechanisms underlying the dualistic mode of action of major soy isoflavones in relation to cell proliferation and cancer risks

Rietjens, I. M. C. M., Sotoca, A. M., Vervoort, J. & Louisse, J., 2013, In : Molecular Nutrition & Food Research. 57, 1, p. 100-113

Research output: Contribution to journalReview articleAcademicpeer-review

Isoflavones
isoflavones
Estrogen Receptors
mechanism of action
cell proliferation
34 Citations (Scopus)

Structural elucidation of low abundant metabolites in complex sample matrices

van der Hooft, J. J. J., de Vos, R. C. H., Ridder, L. O., Vervoort, J. & Bino, R. J., 2013, In : Metabolomics. 9, 5, p. 1009-1018

Research output: Contribution to journalReview articleAcademicpeer-review

Metabolites
Magnetic Resonance Spectroscopy
Mass spectrometry
Nuclear magnetic resonance
Mass Spectrometry
44 Citations (Scopus)

The Arabidopsis embryo as a miniature morphogenesis model

Wendrich, J. R. & Weijers, D., 2013, In : New Phytologist. 199, 1, p. 14-25

Research output: Contribution to journalReview articleAcademicpeer-review

Morphogenesis
Arabidopsis
embryo (plant)
morphogenesis
Embryonic Structures
32 Citations (Scopus)

Transcriptomics approaches in the early Arabidopsis embryo

Palovaara, J., Saiga, S. & Weijers, D., 2013, In : Trends in Plant Science. 18, 9, p. 514-521

Research output: Contribution to journalReview articleAcademicpeer-review

transcriptomics
embryo (plant)
embryogenesis
Arabidopsis
transcriptome
2011
49 Citations (Scopus)

Catalytic and structural features of flavoprotein hydroxylases and epoxidases

Montersino, S., Tischler, D., Gassner, G. T. & van Berkel, W. J. H., 2011, In : Advanced Synthesis and Catalysis. 353, 13, p. 2301-2319

Research output: Contribution to journalReview articleAcademicpeer-review

Flavoproteins
4-Hydroxybenzoate-3-Monooxygenase
Mixed Function Oxygenases
Styrene
Hydroxylation
30 Citations (Scopus)

Proteomics insights into plant signaling and development.

Kaufmann, K., Smaczniak, C. D., de Vries, S. C., Angenent, G. C. & Karlova, R. B., 2011, In : Proteomics. 11, 4, p. 744-755

Research output: Contribution to journalReview articleAcademicpeer-review

Plant Development
Proteomics
Cell signaling
Functional analysis
Cues
2010
99 Citations (Scopus)

Fluorescence lifetime imaging microscopy in life sciences

Borst, J. W. & Visser, A. J. W. G., 2010, In : Measurement Science and Technology. 21, 10, 21 p., 102002.

Research output: Contribution to journalReview articleAcademicpeer-review

Fluorescence Lifetime
life sciences
Life sciences
Microscopy
Microscopic examination
32 Citations (Scopus)

Green beginnings - Pattern formation during plant embryogenesis

Llavata Peris, C. I., Rademacher, E. H. & Weijers, D., 2010, In : Current Topics in Developmental Biology. 91, p. 1-27

Research output: Contribution to journalReview articleAcademicpeer-review

Embryonic Development
Seedlings
Arabidopsis
Seeds
Plant Genome
2009
47 Citations (Scopus)

Auxin enters the matrix - assembly of response machineries for specific outputs

Lokerse, A. S. & Weijers, D., 2009, In : Current Opinion in Plant Biology. 12, 5, p. 520-526

Research output: Contribution to journalReview articleAcademicpeer-review

auxins
gene expression
protein-protein interactions
genes
transcription factors
170 Citations (Scopus)

One for all: the receptor-associated kinase BAK1.

Chinchilla, D., Shan, L., He, P., de Vries, S. C. & Kemmerling, B., 2009, In : Trends in Plant Science. 14, 10, p. 535-541

Research output: Contribution to journalReview articleAcademicpeer-review

phosphotransferases (kinases)
receptors
brassinosteroids
leucine
cell death
19 Citations (Scopus)

Perspectives for on-site monitoring of progesterone

Posthuma-Trumpie, G. A., van Amerongen, A., Korf, J. & van Berkel, W. J. H., 2009, In : Trends in Biotechnology. 27, 11, p. 652-660

Research output: Contribution to journalReview articleAcademicpeer-review

Progesterone
Steroid hormones
Mammals
Monitoring
Ovulation Prediction
54 Citations (Scopus)

Plant Micrometabolomics: The Analysis of Endogenous Metabolites Present in a Plant Cell or Tissue.

Moco, S. I. A., Schneider, B. & Vervoort, J. J. M., 2009, In : Journal of Proteome Research. 8, 4, p. 1694-1703

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Plant Cells
Metabolites
Tissue
Technology
Microdissection
2007
167 Citations (Scopus)

Flavoenzymes

Joosten, V. & van Berkel, W. J. H., 2007, In : Current Opinion in Chemical Biology. 11, 2, p. 195-202

Research output: Contribution to journalReview articleAcademicpeer-review

Chemical Industry
Food Industry
Industrial applications
Momentum
Oxidoreductases
2006
44 Citations (Scopus)

Occurrence and Biocatalytic Potential of Carbohydrate Oxidases.

van Hellemond, E. W., Leferink, N. G. H., Heuts, D. P. H. M., Fraaije, M. W. & van Berkel, W. J. H., 2006, In : Advances in Applied Microbiology. 60, p. 17-54

Research output: Contribution to journalReview articleAcademicpeer-review

Oxidoreductases
Carbohydrates
Enzymes
Oxygen
Food Industry
114 Citations (Scopus)

Sorghum grain as human food in Africa: relevance of content of starch and amylase activities

Dicko, M. H., Gruppen, H., Traore, A. S., Voragen, A. G. J. & van Berkel, W. J. H., 2006, In : African journal of biotechnology. 5, 5, p. 384-395

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Sorghum
grain sorghum
Amylases
amylases
Starch
2005
139 Citations (Scopus)

LC-NMR coupling technology: recent advancements and applications in natural products analysis

Exarchou, V., Krucker, M., van Beek, T. A., Vervoort, J. J. M., Gerothanassis, I. P. & Albert, K., 2005, In : Magnetic Resonance in Chemistry. 43, 9, p. 681-687

Research output: Contribution to journalReview articleAcademicpeer-review

Biological Products
Nuclear magnetic resonance
Phytochemicals
Cryogenics
Mass spectrometry
2004
8 Citations (Scopus)

Towards sorting of biolibraries using single-molecule fluorescence detection techniques

Visser, A. J. W. G., Kunst, B. H., Keller, H. J. H. G. & Schots, A., 2004, In : Current Pharmaceutical Biotechnology. 5, p. 173-179

Research output: Contribution to journalReview articleAcademicpeer-review

Fluorescence
Microfluidics
Photons
Bacteriophages
Equipment and Supplies
2003
213 Citations (Scopus)

Baeyer-Villiger monooxygenases, an emerging family of flavin-dependent biocatalysts

Kamerbeek, N. M., Janssen, D. B., van Berkel, W. J. H. & Fraaije, M. W., 2003, In : Advanced Synthesis and Catalysis. 345, 6-7, p. 667-678

Research output: Contribution to journalReview articleAcademicpeer-review

Biocatalysts
Mixed Function Oxygenases
Genes
Enzymes
Oxidation
88 Citations (Scopus)

Deflavination and reconstitution of proteins. Tackling fold and function

Hefti, M. H., Vervoort, J. J. M. & van Berkel, W. J. H., 2003, In : European Journal of Biochemistry. 270, p. 4227-4242

Research output: Contribution to journalReview articleAcademicpeer-review

Flavoproteins
Proteins
Flavins
Biological Phenomena
Mutagenesis
27 Citations (Scopus)

Fluorescence correlation spectroscopy of GFP fusion proteins in living plant cells

Hink, M. A., Borst, J. W. & Visser, A. J. W. G., 2003, In : Methods in Enzymology. 361, p. 93-112

Research output: Contribution to journalReview articleAcademicpeer-review

Fluorescence Spectrometry
Plant Cells
Green Fluorescent Proteins
Fusion reactions
Fluorescence
1999
103 Citations (Scopus)

Legume nodulation and mycorrhizae formation; two extremes in host specifity meet

Albrecht, C., Geurts, R. & Bisseling, T., 1999, In : The EMBO Journal. 18, 2, p. 281-288

Research output: Contribution to journalReview articleAcademicpeer-review