Bio Process Engineering

Search results

• Transcriptomic analysis of Streptococcus suis Small Colony variants (SCVs) immune to Cas9-mediated genome editing

  Gussak, A. (Creator), Ferrando, M. L. (Creator), Schrama, M. (Creator), van Baarlen, P. (Creator) & Wells, J. (Creator), Wageningen University & Research, 26 Jun 2023

  DOI: 10.4121/21680384

  Dataset

• Genome-scale metabolic modeling underscores the potential of Cutaneotrichosporon oleaginosus ATCC 20509 as a cell factory for biofuel production

  Pham, N. (Creator), Reijnders, M. (Creator), Suarez-Diez, M. (Creator), Nijsse, B. (Creator), Springer, J. (Creator), Eggink, G. (Creator) & Schaap, P. J. (Creator), Wageningen University & Research, 7 Jan 2021

  DOI: 10.6084/m9.figshare.13535813

  Dataset

• RNA sequencing of Cutaneotrichosporon curvatum ATCC 20509 in two conditions. C/N of 2.8 and 28

  Pham, N. (Creator), Reijnders, M. (Creator), Suarez Diez, M. (Creator), Nijsse, B. (Creator), Springer, J. (Creator), Eggink, G. (Creator) & Schaap, P. (Creator), Wageningen University, 14 Apr 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB34237

  Dataset

• Diversity of tryptophan halogenases in sponges of the genus Aplysina

  Gutleben, J. (Creator), Koehorst, J. (Creator), Mcpherson, K. (Creator), Pomponi, S. (Creator), Wijffels, R. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 17 Sept 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA491469/

  Dataset

• Supplementary Peeking Under the skin: Deciphering enigmas underlying necrotising soft tissue infections

  Jahagirdar, S. (Creator), Wageningen University & Research, 9 Jul 2023

  DOI: 10.5281/zenodo.8128357

  Dataset

• bacterial community growing along Nannochloropsis sp. CCAP211/78 in outdoor pilot-scale reactors Raw sequence reads

  Lian, J. (Creator), Steinert, G. (Creator), de Vree, J. (Creator), Meijer, S. (Creator), Heryanto, C. (Creator), Bosma, R. (Creator), Wijffels, R. H. (Creator), Barbosa, M. J. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 10 Apr 2017

  https://www.ncbi.nlm.nih.gov/bioproject/382322

  Dataset

• unclassified Bacteria 16S ribosomal RNA gene, partial sequence

  Öztürk, B. (Creator), de Jaeger, L. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 24 Oct 2013

  https://www.ncbi.nlm.nih.gov/popset/440497697

  Dataset

• Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding

  Schuster, A. (Creator), Lopez, J. V. (Creator), Becking, L. E. (Creator), Kelly, M. (Creator), Pomponi, S. A. (Creator), Wörheide, G. (Creator), Erpenbeck, D. (Creator) & Cárdenas, P. (Creator), 22 Nov 2016

  DOI: 10.5282/ubm/data.98

  Dataset

• Mixed organisms tryptophan halogenase gene, partial cds

  Öztürk, B. (Creator), de Jaeger, L. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 24 Oct 2013

  https://www.ncbi.nlm.nih.gov/popset/414448310

  Dataset

• The genome of the haptophyte Diacronema lutheri (Pavlova lutheri, Pavlovales)

  Hulatt, C. J. (Creator), Wijffels, R. H. (Creator) & Posewitz, M. C. (Creator), 5 Aug 2021

  DOI: 10.5061/dryad.5qfttdz55

  Dataset

• High-throughput insertional mutagenesis reveals novel targets for enhancing lipid accumulation in Nannochloropsis oceanica

  Südfeld, C. (Creator), Hubacek, M. (Creator), Rodrigues Figueiredo, D. (Creator), Naduthodi, M. (Creator), van der Oost, J. (Creator), Wijffels, R. (Creator), Barbosa, M. (Creator) & D'Adamo, S. (Creator), Wageningen University & Research, 13 May 2021

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE167058

  Dataset

• Cultivation of bacteria from Aplysina aerophoba: effects of oxygen and nutrient gradients

  Gutleben, J. (Creator), Sales E Santos Loureiro, C. (Creator), Ramírez Romero, L. A. (Creator), Shetty, S. (Creator), Wijffels, R. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University, 30 Jul 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31820

  Dataset

• Sponge-derived 18S rRNA genes

  Hesp, K. (Creator), van der Heijden, J. M. E. (Creator), Munroe, S. (Creator), Sipkema, D. (Creator), Martens, D. E. (Creator), Wijffels, R. H. (Creator) & Pomponi, S. A. (Creator), Wageningen University & Research, 22 Sept 2021

  https://www.ncbi.nlm.nih.gov/bioproject/765353

  Dataset

• Picochlorum sp. BPE23 genome assembly

  Barten, R. J. P. (Creator), van Workum, F. J. M. (Creator), de Bakker, E. (Creator), Risse, J. E. (Creator), Kleisman, M. (Creator), Correia Navalho, S. A. (Creator), Smit, S. (Creator), Wijffels, R. H. (Creator), Nijveen, H. (Creator) & Barbosa, M. J. (Creator), Wageningen University & Research, 23 Aug 2022

  https://www.ncbi.nlm.nih.gov/bioproject/872549

  Dataset

• Transcriptional and physiological diurnal responses of Tetradesmus obliquus under light-dark cycles and nitrogen limitation

  Carreres, B. M. (Creator) & Martens, D. E. (Creator), Wageningen University & Research, 30 May 2019

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7016/

  Dataset

• unclassified Bacteria 16S ribosomal RNA gene, partial sequence

  Sipkema, D. (Creator), Schippers, K. J. (Creator), Maalcke, W. J. (Creator), Yang, Y. (Creator), Salim, S. (Creator) & Blanch, H. W. (Creator), University of California, 14 Mar 2011

  https://www.ncbi.nlm.nih.gov/popset/164564402

  Dataset

• The diurnal transcriptional landscape of the microalga Tetradesmus obliquus

  Carreres, B. M. (Creator) & Martens, D. E. (Creator), Wageningen University & Research, 24 Sept 2018

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7009/

  Dataset

• Fluorescence Nanno MATLAB

  Batista de Sá, M. (Creator), Ferrer-Ledo, N. (Creator), Wijffels, R. (Creator), Crespo, J. G. (Creator), Barbosa, M. (Creator) & Galinha, C. F. (Creator), Wageningen University & Research, 31 Mar 2020

  DOI: 10.5281/zenodo.3734199

  Dataset

• Methanol based chain elongation with acetate to n-butyrate and isobutyrate at varying selectivities dependent on pH

  de Leeuw, K. (Creator), de Smit, S. (Creator), van Oossanen, S. (Creator), Moerland, M. (Creator), Buisman, C. (Creator) & Strik, D. (Creator), Wageningen University & Research, 13 Mar 2020

  https://www.ebi.ac.uk/ena/data/view/PRJEB36205

  Dataset

• Metagenomics harvested genus-specific single-stranded DNA annealing proteins improve and expand recombineering in Pseudomonas species

  Asin-Garcia, E. (Creator), Garcia-Morales, L. (Creator), Bartholet, T. (Creator), Liang, Z. (Creator), Isaacs, F. (Creator) & Martins dos Santos, V. (Creator), Wageningen University & Research, 13 Oct 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB56403

  Dataset

• Illumina short-read genome sequencing of knockout mutants in Streptococcus suis strain P1/7 constructed using pSStarget, a novel plasmid-based CRISPR/Cas9 genome editing system

  Gussak, A. (Creator), Ferrando, M. L. (Creator), Schrama, M. (Creator), van Baarlen, P. (Creator) & Wells, J. (Creator), Wageningen University & Research, 26 Jul 2023

  DOI: 10.4121/21679886

  Dataset

• Neochloris oleoabundans RNA sequencing of 5 growth conditions, 8 samples

  Carreres, B. M. (Creator) & Martens, D. E. (Creator), Wageningen University & Research, 1 Feb 2019

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-3651/

  Dataset

• Scenedesmus Obliquus UTEX393 draft genome

  Carreres, B. M. (Creator), de Jaeger, L. (Creator), Springer, J. (Creator), Barbosa, M. J. (Creator), Breuer, G. (Creator), van den End, E. J. (Creator), Kleinegris, D. M. M. (Creator), Schäffers, I. (Creator), Wolbert, E. J. H. (Creator), Zhang, H. (Creator), Lamers, P. P. (Creator), Martins dos Santos, V. A. P. (Creator), Wijffels, R. H. (Creator), Eggink, G. (Creator), Schaap, P. J. (Creator) & Martens, D. E. (Creator), Wageningen University, 1 Nov 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB15865

  Dataset

• Bacterial composition of Nannochloropsis sp. CCAP211/78 in outdoor reactors Raw sequence reads

  Lian, J. (Creator), Schimmel, P. (Creator), Sanchez-Garcia, S. (Creator), Wijffels, R. H. (Creator), Smidt, H. (Creator) & Sipkema, D. (Creator), Wageningen University & Research, 28 Aug 2018

  https://www.ncbi.nlm.nih.gov/bioproject/488170

  Dataset

• Data for: Production of phycocyanin by Leptolyngbya sp. in desert environments

  Schipper, K. (Contributor), Barbosa, M. (Contributor), Aljabri, H. (Contributor), Fortunati, F. (Contributor), Oostlander, P. (Contributor) & Wijffels, R. (Contributor), Wageningen University & Research, 20 Mar 2020

  DOI: 10.17632/ss44mvx545

  Dataset