Bacteriology, Host Pathogen Interaction & Diagnostics

Search results

• Effect of ZincOxide in Weaned Piglets

  Schokker, D. (Creator), Jansman, A. J. M. (Creator) & Vastenhouw, S. A. (Creator), Wageningen Livestock Research, 19 Apr 2017

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94370

  Dataset

• A bead-based suspension array for the detection of Salmonella antibodies in pig sera

  van der Wal, F. J. (Creator), Achterberg, R. P. (Creator) & Maassen, C. B. M. (Creator), Wageningen University & Research, 27 Jul 2018

  DOI: 10.6084/m9.figshare.c.4180934

  Dataset

• Dynamics of the Phanerochaete carnosa transcriptome during growth on aspen and spruce

  Jurak, E. (Creator), Suzuki, H. (Creator), van Erven, G. (Creator), Gandier, J. A. (Creator), Wong, P. (Creator), Chan, K. (Creator), Ho, C. (Creator), Gong, Y. (Creator), Tillier, E. (Creator), Rosso, M. N. (Creator), Kabel, M. (Creator), Miyauchi, S. (Creator) & Master, E. R. (Creator), Aalto University, 13 Nov 2018

  DOI: 10.6084/m9.figshare.c.4300514

  Dataset

• Comparative genomic hybridization of Streptococcus suis strains - part 2

  de Greeff, A. (Creator), Wageningen UR, 31 Dec 2010

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2533/

  Dataset

• Suckling Piglets; Fructooligosaccharides

  Schokker, D. (Creator) & Vastenhouw, S. A. (Creator), Wageningen UR, 29 Jan 2018

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE101147

  Dataset

• Metabolic effect of chronic exposure to airborne endotoxins in weaned piglet along with acute heat stress

  Roques, S. (Creator), Kar, S. (Creator), Kluivers-Poodt, M. (Creator), Schokker, D. (Creator), Stockhofe, N. (Creator) & Rebel, A. (Creator), Wageningen University & Research, 15 Jan 2021

  DOI: 10.5281/zenodo.4441826

  Dataset

• Microbiota of sows and their offspring

  Schokker, D. (Creator), Bossers, A. (Creator) & de Greeff, A. (Creator), Zenodo, 2 Mar 2020

  DOI: 10.5281/zenodo.3602861

  Dataset

• Comparative genomic hybridization of Streptococcus suis strains - part 1

  de Greeff, A. (Creator), Wageningen UR, 31 Dec 2010

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2531/

  Dataset

• Different transcriptional response between susceptible and resistant common carp (Cyprinus carpio) fish hints on the mechanism of CyHV-3 disease resistance

  Tadmor-Levi, R. (Creator), Doron-Faigenboim, A. (Creator), Marcos-Hadad, E. (Creator), Petit, J. (Creator), Hulata, G. (Creator), Forlenza, M. (Creator), Wiegertjes, G. F. (Creator) & David, L. (Creator), Hebrew University of Jerusalem, 27 Dec 2019

  DOI: 10.6084/m9.figshare.c.4798188

  Dataset

• Coxiella burnetii strain:42785537 Genome sequencing and assembly

  Kuley, R. (Creator), Kuijt, E. (Creator), Smits, M. A. (Creator), Roest, H. I. J. (Creator), Smith, H. E. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 23 Oct 2017

  https://www.ncbi.nlm.nih.gov/bioproject/312452

  Dataset

• Coxiella burnetii strain:3345937 Genome sequencing and assembly

  Kuley, R. (Creator), Smith, H. E. (Creator), Janse, I. (Creator), Harders, F. L. (Creator), Baas, F. (Creator), Schijlen, E. (Creator), Nabuurs-Fransen, M. H. (Creator), Smits, M. A. (Creator), Roest, H. I. J. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 25 Feb 2016

  https://www.ncbi.nlm.nih.gov/bioproject/310186

  Dataset

• Classification and prediction of Mycobacterium Avium subsp. Paratuberculosis (MAP) shedding severity in cattle based on young stock heifer faecal microbiota composition using random forest algorithms

  Umanetc, A. (Creator), Dinkla, A. (Creator), Vastenhouw, S. A. (Creator), Ravesloot, L. (Creator) & Koets, A. P. (Creator), Wageningen University & Research, 15 Nov 2021

  DOI: 10.6084/m9.figshare.c.5706219

  Dataset

• Transcriptomic profiling of lambs during acute Rift Valley fever virus infection

  Bermúdez-Méndez, E. (Creator), Angelino, P. (Creator), van Keulen, L. (Creator), van de Water, S. (Creator), Rockx, B. (Creator), Pijlman, G. P. (Creator), Ciuffi, A. (Creator), Kortekaas, J. (Creator) & Wichgers Schreur, P. J. (Creator), Wageningen University & Research, 17 Feb 2023

  https://www.ncbi.nlm.nih.gov/bioproject/935986

  Dataset

• RNA sequencing of susceptible and resistant common carp before and after infection with CyHV-3

  Tadmor-Levi, R. (Creator), Doron-Faigenboim, A. (Creator), Marcos-Hadad, E. (Creator), Petit, J. (Creator), Hulata, G. (Creator), Forlenza, M. (Creator), Wiegertjes, G. (Creator) & David, L. (Creator), Hebrew University of Jerusalem, 15 Sept 2019

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA565549

  Dataset

• Coxiella burnetii strain:14160-002 Genome sequencing and assembly

  Kuley, R. (Creator), Kuijt, E. (Creator), Smits, M. A. (Creator), Roest, H. I. J. (Creator), Smith, H. E. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 23 Oct 2017

  https://www.ncbi.nlm.nih.gov/bioproject/312474

  Dataset

• Succession in the caecal microbiota of developing broilers colonised by extended-spectrum β-lactamase-producing Escherichia coli

  Cárdenas-Rey, I. (Creator), Bello Gonzalez, T. (Creator), van der Goot, J. (Creator), Ceccarelli, D. (Creator), Bouwhuis, G. (Creator), Schillemans, D. (Creator), Jurburg, S. D. (Creator), Veldman, K. T. (Creator), de Visser, A. (Creator) & Brouwer, M. S. M. (Creator), Wageningen University & Research, 20 Aug 2022

  DOI: 10.6084/m9.figshare.c.6157692

  Dataset

• Operophtera brumata isolate:WM2013NL Genome sequencing and assembly

  Derks, M. F. L. (Creator), Smit, S. (Creator), Salis, L. (Creator), Schijlen, E. G. W. M. (Creator), Bossers, A. (Creator), Mateman, C. (Creator), Pijl, A. S. (Creator), de Ridder, D. (Creator), Groenen, M. A. M. (Creator), Visser, M. E. (Creator) & Megens, H. J. W. C. (Creator), Wageningen University & Research, 11 Aug 2015

  https://www.ncbi.nlm.nih.gov/bioproject/263715

  Dataset

• Effects of digested onion extracts on intestinal gene expression using rat intestine slices

  de Wit, N. J. W. (Creator), Hulst, M. M. (Creator), Govers, C. C. F. M. (Creator), van der Meulen, J. (Creator), van Hoef, A. M. A. (Creator), Stoopen, G. M. (Creator), Hamers, A. R. M. (Creator), Hoekman, A. J. W. (Creator), de Vos, C. H. (Creator), Bovee, T. F. H. (Creator), Smits, M. A. (Creator), Mes, J. J. (Creator) & Hendriksen, P. J. M. (Creator), Wageningen University & Research, 10 Jul 2016

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE84179

  Dataset

• Patterns of community assembly in the developing chicken microbiome reveal rapid primary succession

  Jurburg, S. (Creator), Brouwer, M. (Creator), Ceccarelli, D. (Creator), van der Goot, J. (Creator), Jansman, A. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 25 Jan 2019

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA517082/

  Dataset

• Perturbation of microbiota in one-day old broiler chickens with antibiotic for 24 hours negatively affects intestinal immune development

  Schokker, D. (Creator), Jansman, A. J. M. (Creator), Veninga, G. (Creator), de Bruin, N. (Creator), Vastenhouw, S. A. (Creator), de Bree, F. M. (Creator), Bossers, A. (Creator), Rebel, J. M. J. (Creator) & Smits, M. A. (Creator), Wageningen University & Research, 20 Mar 2017

  DOI: 10.6084/m9.figshare.c.3721750

  Dataset

• Coxiella burnetii strain:18430 Genome sequencing and assembly

  Kuley, R. (Creator), Kuijt, E. (Creator), Smits, M. A. (Creator), Roest, H. I. J. (Creator), Smith, H. E. (Creator) & Bossers, A. (Creator), Wageningen University & Research, 23 Oct 2017

  https://www.ncbi.nlm.nih.gov/bioproject/312574

  Dataset

• Intestinal development in two divergent chicken lines (X and Y)

  Schokker, D. (Creator), Vastenhouw, S. (Creator), Smits, M. (Creator) & Rebel, A. (Creator), Wageningen UR, 14 Jan 2016

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE65042

  Dataset

• Effects of rye inclusion in broilers

  Schokker, D. (Creator), van Krimpen, M. M. (Creator) & Vastenhouw, S. A. (Creator), Wageningen Livestock Research, 19 Apr 2017

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94095

  Dataset

• Escherichia coli ESBL plasmid sequencing

  Smith, H. (Creator), Bossers, A. (Creator), Harders, F. (Creator), Wu, G. (Creator), Woodford, N. (Creator), Schwarz, S. (Creator), Guerra, B. (Creator), Rodríguez, I. (Creator), Van Essen-Zandbergen, A. (Creator), Brouwer, M. (Creator) & Mevius, D. (Creator), Wageningen University & Research, 14 Oct 2014

  https://www.ncbi.nlm.nih.gov/bioproject/263774

  Dataset

• Disentangling the genetic basis of rhizosphere microbiome assembly in tomato

  Oyserman, B. O. (Creator), Flores, S. S. (Creator), Griffioen, T. (Creator), Pan, X. (Creator), van der Wijk, E. (Creator), Pronk, L. (Creator), Lokhorst, W. (Creator), Nurfikari, A. (Creator), Paulson, J. N. (Creator), Movassagh, M. (Creator), Stopnisek, N. (Creator), Kupczok, A. (Creator), Cordovez, V. (Creator), Carrión, V. J. (Creator), Ligterink, W. (Creator), Snoek, B. L. (Creator), Medema, M. H. (Creator) & Raaijmakers, J. M. (Creator), Netherlands Institute of Ecology (NIOO-KNAW), 8 Dec 2021

  https://www.ncbi.nlm.nih.gov/bioproject/787039

  Dataset