Research Output 1992 2020

2019

Onderbouwing DGF-plafonds 2020/2024

van Asseldonk, M. A. P. M., Elbers, A. R. W., Hagenaars, T. J., Boender, G. J. & Bergevoet, R. H. M., 2019, Wageningen: Wageningen Economic Research. 41 p. (Wageningen Economic Research report; no. 2019-046)

Research output: Book/ReportReportProfessional

4 Citations (Scopus)

Patterns of community assembly in the developing chicken microbiome reveal rapid primary succession

Jurburg, S. D., Brouwer, M. S. M., Ceccarelli, D., van der Goot, J., Jansman, A. J. M. & Bossers, A., 1 Sep 2019, In : MicrobiologyOpen. 8, 9, p. e00821

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Microbiota
Chickens
Ruminococcus
Arthrobacter
Escherichia

Phylogenomic investigation of IncI1-I plasmids harboring blaCMY-2 and blaSHV-12 in salmonella enterica and Escherichia coli in multiple countries

Castellanos, L. R., van der Graaf-Van Bloois, L., Donado-Godoy, P., Mevius, D. J., Wagenaar, J. A., Hordijk, J. & Zomer, A. L., 2019, In : Antimicrobial Agents and Chemotherapy. 63, 7, e02546-18.

Research output: Contribution to journalArticleAcademicpeer-review

Salmonella enterica
Plasmids
Escherichia coli
Genome
Genes
1 Citation (Scopus)

Phylogeographic distribution of human and hare Francisella tularenses susp. holarctica strains in the Netherlands and its pathology in European brown hares (Lepus europaeus)

Koene, M. G. J., Rijks, J. M., Maas, M., Ruuls, R. C., Engelsma, M. Y., van Tulden, P. W., Kik, M., IJzer, J., Notermans, D., de Vries, M., Fanoy, E., Pijnacker, R., Spierenburg, M. A. H., Bavelaar, H., Berkhout, H., Sankatsing, S., Diepersloot, R., Myrtennas, K., Granberg, M., Forsman, M. & 2 others, Roest, H. I. J. & Gröne, A., 11 Feb 2019, In : Frontiers in Cellular and Infection Microbiology. 9, 11 p., 11.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Francisella
Hares
Netherlands
Pathology
Tularemia
1 Citation (Scopus)

Pooling of genital swabs for detection by PCR of Taylorella equigenitalis, the cause of contagious equine metritis

Mawhinney, I., Errington, J., Stamper, N., Torrens, N., Engelsma, M. Y. & Roest, H. I. J., Mar 2019, In : Equine Veterinary Journal. 51, 2, p. 227-230

Research output: Contribution to journalArticleAcademicpeer-review

Taylorella equigenitalis
contagious equine metritis
Horses
genitalia
Polymerase Chain Reaction
Open Access
Influenza in Birds
video cameras
avian influenza
wild birds
Netherlands
2 Citations (Scopus)

Quantifying antimicrobial use in Dutch companion animals

Hopman, N. E. M., Van Dijk, M. A. M., Broens, E. M., Wagenaar, J. A., Heederik, D. J. J. & Van Geijlswijk, I. M., 28 May 2019, In : Frontiers in Veterinary Science. 6, May, 158.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Pets
pets
Animal Hospitals
anti-infective agents
Veterinary Medicine
3 Citations (Scopus)

Quantitative and qualitative analysis of antimicrobial usage at farm and flock level on 181 broiler farms in nine European countries

1 Mar 2019, In : The Journal of antimicrobial chemotherapy. 74, 3, p. 798-806

Research output: Contribution to journalArticleAcademicpeer-review

Polymyxins
Fluoroquinolones
Farms
Incidence
8 Citations (Scopus)
Swine
Polymyxins
Penicillins
Cross-Sectional Studies
Farms

Quantitative Assessment Of The Health Risk For Livestock When Animal Viruses Are Applied in Human Oncolytic Therapy: A Case Study for Seneca Valley Virus

Schijven, J., Brizee, S., Teunis, P., de Vos-de Jong, C. J., Eble, P. L. & Rutjes, S., May 2019, In : Risk Analysis. 39, 5, p. 982-991 13227.

Research output: Contribution to journalArticleAcademicpeer-review

Health risks
Livestock
Viruses
Farms
Animals

Rapid risk assessment tool (RRAT) to assess exotic animal disease introduction risks

de Vos-de Jong, C. J., Petie, R., van Klink, E. G. M. & Swanenburg, M., 2019

Research output: Book/ReportReportProfessional

Reduction of antibiotic use and antibiotic resistance in commercial poultry

Veldman, K. T., Sanders, P. & Mevius, D. J., Nov 2019, International Symposium on Avian Mycoplasmosis and Infectious Coryza 2019 (ISMC 2019). Deventer: CVI / GD, p. 86-91

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access
antibiotic resistance
poultry
antibiotics
livestock
Netherlands
Open Access

Risicomodellering veehouderij en gezondheid (RVG): modellering van regionale endotoxineconcentraties en relaties met gezondheidseffecten

Heederik, D., Erbrink, H., Farokhi, A., Hagenaars, T., Hoek, G., Ogink, N., de Rooij, M., Smit, L., Winkel, A. & Wouters, I., Feb 2019, Wageningen: Wageningen University & Research. 133 p. (IRAS UU; no. 2019-01)(WBVR; no. 1910304)

Research output: Book/ReportReportProfessional

Open Access

Risk assessment of exotic disease incursion and spread

Cabral, M., Taylor, R. & de Vos, C. J., 1 Sep 2019, In : EFSA Journal. 17, S2, e170916.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
risk assessment
imports
plant health
animal diseases
Animal Diseases

Risk of pneumonia among residents living near goat and poultry farms during 2014-2016

Post, P. M., Hogerwerf, L., Huss, A., Petie, R., Boender, G. J., Baliatsas, C., Lebret, E., Heederik, D., Hagenaars, T. J., IJzermans, J. C. & Smit, L. A. M., 14 Oct 2019, In : PLoS ONE. 14, 10, e0223601.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Poultry
Goats
Farms
pneumonia
Pneumonia

Successful Host Adaptation of IncK2 Plasmids

Rozwandowicz, M., Brouwer, M. S. M., Mughini-Gras, L., Wagenaar, J. A., Gonzalez-Zorn, B., Mevius, D. J. & Hordijk, J., 15 Oct 2019, In : Frontiers in Microbiology. 10, 2384.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Plasmids
Costs and Cost Analysis
Chickens
Escherichia coli
Poultry
7 Citations (Scopus)

The antimicrobial resistome in relation to antimicrobial use and biosecurity in pig farming, a metagenome-wide association study in nine European countries

Van Gompel, L., Luiken, R. E. C., Sarrazin, S., Munk, P., Knudsen, B. E., Hansen, R. B., Bossers, A., Aarestrup, F. M., Dewulf, J., Wagenaar, J. A., Mevius, D. J., Schmitt, H., Heederik, D. J. J., Dorado-García, A. & Smit, L. A. M., Apr 2019, In : The Journal of antimicrobial chemotherapy. 74, 4, p. 865-876

Research output: Contribution to journalArticleAcademicpeer-review

Metagenome
Agriculture
Swine
Genes
Macrolides

The relationship between the presence of antibodies and direct detection of Toxoplasma gondii in slaughtered calves and cattle in four European countries

Opsteegh, M., Spano, F., Aubert, D., Balea, A., Burrells, A., Cherchi, S., Cornelissen, J. B. W. J., Dam-Deisz, C., Guitian, J., Györke, A., Innes, E. A., Katzer, F., Limon, G., Possenti, A., Pozio, E., Schares, G., Villena, I., Wisselink, H. J. & van der Giessen, J. W. B., 1 Jun 2019, In : International Journal for Parasitology. 49, 7, p. 515-522 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Toxoplasma
Antibodies
Diaphragm
Biological Assay
Parasites

The role of phosphatidylinositol mannosides in the serological diagnosis of mycobacterial infections

Koets, A. P., van den Esker, M. H., Riepema, K. & Bakker, D., 13 Nov 2019, In : Veterinary Sciences. 6, 4, 91.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
mycobacterial diseases
serodiagnosis
phosphatidylinositols
antigens
Antigens

The role of wildlife in the environmental dispersal of antimicrobial resistance in agricultural areas

van den Brink, N. W., Umanetc, A., de Boer, F., van Hooft, W. F., Matson, K. D., Lahr, J., Mevius, D. J. & Smidt, H., 26 May 2019, p. 30-30.

Research output: Contribution to conferenceAbstractAcademic

Open Access

The shufflon of IncI1 plasmids is rearranged constantly during different growth conditions

Brouwer, M. S. M., Jurburg, S. D., Harders, F., Kant, A., Mevius, D. J., Roberts, A. P. & Bossers, A., Mar 2019, In : Plasmid. 102, p. 51-55

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Genetic Recombination
Plasmids
Growth
Open Reading Frames
Nanopores

Time trends, seasonal differences and determinants of systemic antimicrobial use in companion animal clinics (2012-2015)

Hopman, N. E. M., Portengen, L., Heederik, D. J. J., Wagenaar, J. A., Van Geijlswijk, I. M. & Broens, E. M., 1 Aug 2019, In : Veterinary Microbiology. 235, p. 289-294 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Pets
pets
anti-infective agents
Animal Distribution
Dogs
2 Citations (Scopus)

Transmission of African Swine Fever Virus via carrier (survivor) pigs does occur

Eblé, P. L., Hagenaars, T. J., Weesendorp, E., Quak, S., Moonen-Leusen, H. W. & Loeffen, W. L. A., Oct 2019, In : Veterinary Microbiology. 237, 108345.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
African Swine Fever Virus
African swine fever virus
Swine
swine
Infection
5 Citations (Scopus)

Transmission routes of ESBL/pAmpC producing bacteria in the broiler production pyramid, a literature review

Dame-Korevaar, A., Fischer, E. A. J., van der Goot, J., Stegeman, A. & Mevius, D., 1 Jan 2019, In : Preventive Veterinary Medicine. 162, p. 136-150

Research output: Contribution to journalArticleAcademicpeer-review

poultry production
Bacteria
bacteria
beta-lactamase
farms

Van insect naar vis

Haenen, O. L. M., Borghuis, A. & Weerman, E., Sep 2019, In : Visionair : het vakblad van sportvisserij Nederland. 13, 53, p. 42-43

Research output: Contribution to journalArticleProfessional

Open Access
1 Citation (Scopus)

Virus Shedding of Avian Influenza in Poultry: A Systematic Review and Meta-Analysis

Germeraad, E. A., Sanders, P., Hagenaars, T. J., de Jong, M. C. M., Beerens, N. & Gonzales, J. L., 2 Sep 2019, In : Viruses. 11, 9

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Virus Shedding
Influenza in Birds
Poultry
Orthomyxoviridae
Meta-Analysis
1 Citation (Scopus)

Whole-genome sequencing of dog-specific assemblages C and D of Giardia duodenalis from single and pooled cysts indicates host-associated genes

Kooyman, F. N. J., Wagenaar, J. A. & Zomer, A., 1 Dec 2019, In : Microbial Genomics. 5, 12

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Giardia lamblia
Cysts
Genome
Dogs
Genes

Zoonotic endocarditis in a man, The Netherlands

Sleutjens, J., Meijer, D., Meregalli, P. G., Bakker, L., Wagenaar, J. A., Duim, B. & Zomer, A., 1 Jan 2019, In : Emerging Infectious Diseases. 25, 1, p. 180-182

Research output: Contribution to journalLetterAcademicpeer-review

Zoonoses
Endocarditis
Netherlands
Horses
Streptococcus equi
2018
26 Citations (Scopus)

Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries

Munk, P., Knudsen, B. E., Lukjacenko, O., Duarte, A. S. R., Van Gompel, L., Luiken, R. E. C., Smit, L. A. M., Schmitt, H., Garcia, A. D., Hansen, R. B., Petersen, T. N., Bossers, A., Ruppé, E., Graveland, H., van Essen, A., Gonzalez-Zorn, B., Moyano, G., Sanders, P., Chauvin, C., David, J. & 20 others, Battisti, A., Caprioli, A., Dewulf, J., Blaha, T., Wadepohl, K., Brandt, M., Wasyl, D., Skarzyńska, M., Zajac, M., Daskalov, H., Saatkamp, H. W., Stärk, K. D. C., Lund, O., Hald, T., Pamp, S. J., Vigre, H., Heederik, D., Wagenaar, J. A., Mevius, D. & Aarestrup, F. M., 23 Jul 2018, In : Nature Microbiology. 3, 8, p. 898-908

Research output: Contribution to journalArticleAcademicpeer-review

Poultry
Livestock
Swine
Databases
Genes
7 Citations (Scopus)

A cross sectional study on Dutch layer farms to investigate the prevalence and potential risk factors for different Chlamydia species

Heijne, M., van der Goot, J. A., Fijten, H., van der Giessen, J. W., Kuijt, E., Maassen, C. B. M., van Roon, A., Wit, B., Koets, A. P. & Roest, H. I. J., 1 Jan 2018, In : PLoS ONE. 13, 1, e0190774.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Chlamydia
cross-sectional studies
Farms
Chlamydophila psittaci
risk factors
4 Citations (Scopus)

Assessing the variability in transmission of bovine tuberculosis within Spanish cattle herds

Ciaravino, G., García-Saenz, A., Cabras, S., Allepuz, A., Casal, J., García-Bocanegra, I., De Koeijer, A., Gubbins, S., Sáez, J. L., Cano-Terriza, D. & Napp, S., Jun 2018, In : Epidemics. 23, p. 110-120

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Bovine Tuberculosis
Cattle Diseases
Bayes Theorem
Skin Tests
Spain
4 Citations (Scopus)

Associations between pneumonia and residential distance to livestock farms over a five-year period in a large population-based study

Kalkowska, D. A., Boender, G. J., Smit, L. A. M., Baliatsas, C., Yzermans, J., Heederik, D. J. J. & Hagenaars, T. J., 1 Jul 2018, In : PLoS ONE. 13, 7, e0200813.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Disease control
Livestock
Farms
pneumonia
Pneumonia
1 Citation (Scopus)

Author Correction: Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries

Munk, P., Knudsen, B. E., Lukjancenko, O., Duarte, A. S. R., Van Gompel, L., Luiken, R. E. C., Smit, L. A. M., Schmitt, H., Garcia, A. D., Hansen, R. B., Petersen, T. N., Bossers, A., Ruppé, E., Lund, O., Hald, T., Pamp, S. J., Vigre, H., Heederik, D., Wagenaar, J. A., Mevius, D. & 20 others, Aarestrup, F. M., Graveland, H., van Essen, A., Gonzalez-Zorn, B., Moyano, G., Sanders, P., Chauvin, C., David, J., Battisti, A., Caprioli, A., Dewulf, J., Blaha, T., Wadepohl, K., Brandt, M., Wasyl, D., Skarzyńska, M., Zajac, M., Daskalov, H., Saatkamp, H. W. & Stärk, K. D. C., 2018, In : Nature Microbiology. 3, 1186.

Research output: Contribution to journalComment/Letter to the editorAcademic

Open Access
Swine

Biological and anthropological drivers for emerging zoonoses from an interdisciplinary perspective

Swanenburg, M., de Lauwere, C. C., Roest, H. I. J., van der Poel, W. H. M., De Boer, F., Vaandrager, L., Bergevoet, R. H. M., Hogeveen, H. & de Vos-de Jong, C. J., 22 Jun 2018.

Research output: Contribution to conferencePoster

Biological and anthropological drivers for emerging zoonoses from an interdisciplinary perspective

Swanenburg, M., de Lauwere, C. C., Roest, H. I. J., van der Poel, W. H. M., de Boer, F., Vaandrager, L., Bergevoet, R. H. M., Hogeveen, H., Petie, R. & de Vos-de Jong, C. J., 12 Nov 2018.

Research output: Contribution to conferenceAbstract

2 Citations (Scopus)

Brucella pinnipedialis in grey seals (Halichoerus grypus) and harbor seals (Phoca vitulina) in the Netherlands

Kroese, M. V., Beckers, L., Bisselink, Y. J. W. M., Brasseur, S., van Tulden, P. W., Koene, M. G. J., Roest, H. I. J., Ruuls, R. C., Backer, J. A., Ijzer, J., van der Giessen, J. W. B. & Willemsen, P. T. J., 1 Jul 2018, In : Journal of Wildlife Diseases. 54, 3, p. 439-449

Research output: Contribution to journalArticleAcademicpeer-review

Halichoerus grypus
Phoca vitulina
Brucella
seals
Netherlands
2 Citations (Scopus)

Brucella suis infection in dog fed raw meat, the Netherlands

van Dijk, M. A. M., Engelsma, M. Y., Visser, V. X. N., Spierenburg, M. A. H., Holtslag, M. E., Willemsen, P. T. J., Wagenaar, J. A., Broens, E. M. & Roest, H. I. J., Jun 2018, In : Emerging Infectious Diseases. 24, 6, p. 1127-1129

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Brucella suis
Netherlands
Meat
Dogs
Infection
5 Citations (Scopus)

Campylobacter blaseri sp. Nov., isolated from common seals (Phoca vitulina)

Gilbert, M. J., Zomer, A. L., Timmerman, A. J., Spaninks, M. P., Rubio-García, A., Rossen, J. W., Duim, B. & Wagenaar, J. A., 1 May 2018, In : International Journal of Systematic and Evolutionary Microbiology. 68, 5, p. 1787-1794

Research output: Contribution to journalArticleAcademicpeer-review

Phoca
Phoca vitulina
Campylobacter
seals
genome
25 Citations (Scopus)

Carbapenem-resistant Enterobacteriaceae in wildlife, food-producing, and companion animals: a systematic review

Köck, R., Daniels-Haardt, I., Becker, K., Mellmann, A., Friedrich, A. W., Mevius, D., Schwarz, S. & Jurke, A., Dec 2018, In : Clinical Microbiology and Infection. 24, 12, p. 1241-1250

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Carbapenems
Pets
Enterobacteriaceae
Food
Livestock
1 Citation (Scopus)

Chicken immune response following in ovo delivery of bacterial flagellin

Vaezirad, M. M., Koene, M. G., Wagenaar, J. A. & van Putten, J. P. M., 12 Apr 2018, In : Vaccine. 36, 16, p. 2139-2146

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Flagellin
flagellin
Chickens
immune response
chickens
2 Citations (Scopus)

Chlamydia psittaci and C. avium in feral pigeon (Columba livia domestica) droppings in two cities in the Netherlands

Burt, S. A., Röring, R. E. & Heijne, M., 2018, In : Veterinary Quarterly. 38, 1, p. 63-66

Research output: Contribution to journalLetterAcademicpeer-review

Open Access
Chlamydophila psittaci
Columba livia
Columbidae
pigeons
Netherlands
2 Citations (Scopus)

Comparative genomics of phenotypic antimicrobial resistances in methicillin-resistant Staphylococcus pseudintermedius of canine origin

Wegener, A., Broens, E. M., Zomer, A., Spaninks, M., Wagenaar, J. A. & Duim, B., Nov 2018, In : Veterinary Microbiology. 225, p. 125-131

Research output: Contribution to journalArticleAcademicpeer-review

Methicillin Resistance
methicillin
Genomics
Staphylococcus
antibiotic resistance
1 Citation (Scopus)

Comparing Culicoides biting rates in horses and cattle in The Netherlands: potential relevance to African horse sickness epidemiology

Elbers, A. R. W., Gonzales, J. L. & Meiswinkel, R., 1 Jul 2018, In : Entomologia Experimentalis et Applicata. 166, 7, p. 535-544

Research output: Contribution to journalArticleAcademicpeer-review

African horse sickness
biting rates
Culicoides
epidemiology
horse
8 Citations (Scopus)

Comparing four diagnostic tests for Giardia duodenalis in dogs using latent class analysis

Uiterwijk, M., Nijsse, R., Kooyman, F. N. J., Wagenaar, J. A., Mughini-Gras, L., Koop, G. & Ploeger, H. W., 31 Jul 2018, In : Parasites and Vectors. 11, 1, 449.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Giardia lamblia
Routine Diagnostic Tests
Dogs
Giardia
Centrifugation
4 Citations (Scopus)

Dynamics of cefotaxime resistant Escherichia coli in broilers in the first week of life

Dierikx, C. M., van der Goot, J., van Essen-Zandbergen, A. & Mevius, D. J., 1 Aug 2018, In : Veterinary Microbiology. 222, p. 64-68

Research output: Contribution to journalArticleAcademicpeer-review

cefotaxime
Cefotaxime
beta-lactamase
beta-Lactamases
broiler chickens
5 Citations (Scopus)

Effective thresholds for reporting suspicions and improve early detection of avian influenza outbreaks in layer chickens

Gonzales, J. L. & Elbers, A. R. W., 4 Jun 2018, In : Scientific Reports. 8, 8533.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
avian influenza
chickens
egg production
farms
disease detection

Embryo survival and efforts to reduce ESBL cross contamination in the hatchery using One2Born hatcher baskets

Lourens, S. & Veldman, K., May 2018, Wageningen: Wageningen Livestock Research. 25 p. (Wageningen Livestock Research Report; no. 1103)

Research output: Book/ReportReportProfessional

Open Access
cross contamination
hatcheries
embryo (animal)
chicks
Escherichia coli
4 Citations (Scopus)

Enterobacter cloacae complex isolated from shrimps from Vietnam carrying blaIMI-1 resistant to carbapenems but not cephalosporins

Brouwer, M. S. M., Rapallini, M., Geurts, Y., Harders, F., Bossers, A., Mevius, D. J., Wit, B. & Veldman, K. T., 1 Jul 2018, In : Antimicrobial Agents and Chemotherapy. 62, 7, e00398-18.

Research output: Contribution to journalLetterAcademicpeer-review

4 Citations (Scopus)

Estimating the between-farm transmission rates for highly pathogenic avian influenza subtype H5N1 epidemics in Bangladesh between 2007 and 2013

Ssematimba, A., Okike, I., Ahmed, G. M., Yamage, M., Boender, G. J., Hagenaars, T. J. & Bett, B., 1 Feb 2018, In : Transboundary and Emerging Diseases. 65, 1, p. e127-e134

Research output: Contribution to journalArticleAcademicpeer-review

Influenza in Birds
Bangladesh
avian influenza
farms
Basic Reproduction Number