Research Output

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Conference paper
2019

Defining resilient pigs after a Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) challenge using activity and feeding data from accelerometers

Van Der Zande, L. E., Dunkelberger, J. R., Rodenburg, B., Mathur, P. K., Cairns, W. J., Keyes, M. C., Eggert, J. M., Little, E. A., Dee, S. A. & Knol, E. F., Aug 2019, Precision Livestock Farming 2019: Papers Presented at the 9th European Conference on Precision Livestock Farming, ECPLF 2019. O'Brien, B., Hennessy, D. & Shalloo, L. (eds.). Teagasc, p. 471-475 5 p. (Precision Livestock Farming 2019 - Papers Presented at the 9th European Conference on Precision Livestock Farming, ECPLF 2019).

Research output: Chapter in Book/Report/Conference proceedingConference paper

Enhancing the functioning of farm animal gene banks in Europe: results of the IMAGE project

Hiemstra, S. J., Boettcher, P., Crooijmans, R. P. M. A., Danchin-Burge, C., Leroy, G., Moran, D., Kugle, W., Woelders, H. & Tixier-Boichard, M., Oct 2019, Proceedings of ESPG conference 23-25 October Prague Czech Republic. Trevil, P. & Weigend, S. (eds.). Prague, p. 25-28

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

GWAS for genotype by lactation stage interaction for milk production

Lu, H. & Bovenhuis, H., Aug 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science. Wageningen: Wageningen Academic Publishers, p. 597-597 (Book of Abstracts).

Research output: Chapter in Book/Report/Conference proceedingConference paper

2018

Accuracy of genomic estimated breeding values for crossbred performance in broilers using a purebred or crossbred reference population

Duenk, P., Calus, M. P. L., Wientjes, Y. C. J., Breen, V., Henshall, J., Hawken, R. & Bijma, P., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Methods and Tools - Prediction 3. WCGALP, 5 p. 220

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Assigning pigs to uniform target weight groups using machine learning

Alsahaf, A., Azzopardi, G., Ducro, B. J., Veerkamp, R. F. & Petkov, N., 11 Feb 2018, World Congress on Genetics Applied to Livestock Production. 1 ed. Vol. Species - Porcine. p. 112-112

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

A survey of deleterious variation in highly managed pig populations

Derks, M. F. L., Megens, H. J. W. C., Bosse, M., Lopes, M. S., Harlizius, B. & Groenen, M., 24 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production. 7 p. 11.522

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Automatic milking system, a source for novel phenotypes as base for new genetic selection tools

Vosman, J. J., Poppe, H. W. M., Mulder, H. A., Assen, A., Ducro, B. J., Gerrits, A., Vesseur, C., Boes, J. H., Eding, H. & de Jong, G., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Technologies - Novel Phenotypes. WCGALP, 8 p. 286

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Breed-specific genome-wide association study for purebred and crossbred performance

Sevillano Del Aguila, C. A., Guimaraes, S. E. F., Silva, F. & Calus, M. P. L., 17 Feb 2018, Proceedings 11th World Congress of Genetics Applied to Livestock Production. 6 p. 11.332

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Candidate gene for natural immune competence in chickens revealed through genome wide association study

Visker, M. H. P. W., Berghof, T. V. L., Arts, J. A. J., Parmentier, H. K., van der Poel, J. J., Vereijken, A. & Bovenhuis, H., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Biology - Disease Resistance 3. WCGALP, 4 p. 43

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Derivation of parentage and breed-of-origin of alleles in a crossbred broiler dataset

Calus, M. P. L., Vandenplas, J., Hulsegge, B., Borg, R., Henshall, J. & Hawken, R., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Species - Avian 2. WCGALP, 6 p. 320

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Detection of candidate regions affecting bovine IgM natural antibodies in milk

Cordero Solorzano, J., Arts, J. A. J., Parmentier, H. K. & Bovenhuis, H., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Biology - Disease Resistance 1. WCGALP, 8 p. 559

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Early prediction of phenotypic survival to the second lactation in Dutch and Flemish Holstein heifers using genomic and phenotypic data

van der Heide, E. E. M., Veerkamp, R. F., Kamphuis, C. & Ducro, B. J., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Electronic Poster Session - Theory to Application 2. 6 p. 99

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genetic analysis of udder conformation traits derived from AMS recording in dairy cows

Ducro, B. J., Poppe, H. W. M., Mulder, H. A. & de Jong, G., Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Electronic Poster Session - Biology & Species - Bovine (dairy) 2. WCGALP, 5 p. 479

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genome-wide association study of the de novo synthesized milk fatty acids based on Dutch, Danish and Chinese Holstein Friesians

Gebreyesus, G., Buitenhuis, B., Poulsen, N. A., Visker, M. H. P. W., Zhang, Q., van Valenberg, H. J. F., Sun, D. & Bovenhuis, H., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Biology & Species - Bovine (dairy) 2. WCGALP, 6 p. 141

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomic Breeding Value Estimation in countries without large-scale genotyping: merging two training populations to increase genomic reliabilities

Stoop, W. M., Calus, M. P. L., Schrooten, C., Gombacsi, P., Weller, J. I. & de Jong, G., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Electronic Poster Session - Theory to Application - 1. WCGALP, 6 p. 157

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomic prediction of feed intake using predictor traits

Manzanilla Pech, C. I. V., Veerkamp, R. F., de Haas, Y., Calus, M. P. L. & ten Napel, J., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production. 4 p. 114

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomic selection and inbreeding and kinship in Dutch-Flemish Holstein Friesian cattle

Doekes, H. P., Veerkamp, R. F., Bijma, P., Hiemstra, S. J., Ursinus, W. W., van der Beek, S. & Windig, J. J., 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Theory to Application 2. 5 p. 11.90

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

GWAS for genotype by lactation stage interaction in dairy cattle.

Lu, H. & Bovenhuis, H., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production. Vol. 11.469. 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Increasing genetic gain by selecting for higher Mendelian sampling variance

Bijma, P., Wientjes, Y. C. J. & Calus, M. P. L., 1 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Genetic Gain - Breeding Strategies 2. WCGALP, 5 p. 47

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

LocalPork - breeding for local conditions

Bastiaansen, J. W. M., Guimarães, S. E. F., Ali, B. M., Sevillano, C. A., Mezencio Godinho, R., Bergsma, R., Lopes, M. S., de Mey, Y. & Calus, M. P. L., 11 Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Species - Porcine 1. WCGALP, 872

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Models with indirect genetic effects depeding on group sizes - A simulation study assessing the precision of the estimates of the dilution

Heidaritabar, M., Bijma, P., Janss, L. G., Bortoluzzi, C., Nielsen, H. M., Ask, B. & Christensen, O. F., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Biology - Behaviour. WCGALP, 38

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Predicting milk phosphorus content based on genotypic and milk infrared data

Bovenhuis, H., Jibrila, I. & Dijkstra, J., Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Electronic Poster Session - Biology - Feed Intake and Efficiency 1. WCGALP, 5 p. 534

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Predicting slaughter weight in pigs with regression tree ensembles

Alsahaf, A., Azzopardi, G., Ducro, B., Veerkamp, R. F. & Petkov, N., Jan 2018, Applications of Intelligent Systems - Proceedings of the 1st International APPIS Conference 2018, APPIS 2018. Petkov, N., Strisciuglio, N. & Travieso-Gonzalez, C. M. (eds.). IOS Press, p. 1-9 (Frontiers in Artificial Intelligence and Applications; vol. 310).

Research output: Chapter in Book/Report/Conference proceedingConference paper

The economic value of R0 for macroparasitic diseases

Janssen, K. P. E., Saatkamp, H. W., Bijma, P., de Jong, M. C. M. & Komen, J., 16 Feb 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Genetic gain - Breeding Objectives and Economics of Selection Schemes 2. WCGALP, 8 p. 1021

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

The fate of new mutations: genomic selection exploits new mutation variance to a much smaller degree than traditional selection

Mulder, H. A., Lee, S. H., Hayes, B. J. & van der Werf, J. H. J., Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Genetic Gain - Breeding Strategies 1. WCGALP, 5 p. 415

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

The value of conserved samples in gene banks for animal breeding in the MRIJ cattle breed

Eynard, S. E., Calus, M. P. L., Hulsegge, I., Hiemstra, S. J. & Windig, J. J., 2018, Proceedings of the World Congress on Genetics Applied to Livestock Production: Volume Challenges - Species Conservation. WCGALP, 5 p. 191

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Uniformity in birth weight is heritable in Norwegian White Sheep

Sae-Lim, P., Jakobsen, J. H. & Mulder, H. A., Feb 2018, Proceedings of the 11th World Congress on Genetics Applied to Livestock Production: Volume Challenges - Genotype by Environment Interactions. WCGALP, 6 p. 278

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access
2017

RNA/DNA ratios used to study growth in coastal nursery areas

Rutting, M., Crooijmans, R. P. M. A., van Hal, R. & Tulp, I. Y. M., 2017.

Research output: Contribution to conferenceConference paperAcademic

Open Access
2016

Factors affecting the estimation of the genetic correlation between populations

Wientjes, Y. C. J., Bijma, P., Duenk, P. & Calus, M. P. L., 2016.

Research output: Contribution to conferenceConference paperAcademic

Improved ruminant genetics: Implementation guidance for policymakers and investors

de Haas, Y., Davis, S., Reisinger, A., Richards, M., Difford, G. & Lassen, J., 9 Sep 2016.

Research output: Contribution to conferenceConference paperProfessional

Open Access
2014

(A)cross-breed Genomic Prediction

Calus, M. P. L., Huang, H., Wientjes, Y. C. J., ten Napel, J., Bastiaansen, J. W. M., Price, M. D., Veerkamp, R. F., Vereijken, A. & Windig, J. J., 2014, p. 1-6.

Research output: Contribution to conferenceConference paperAcademic

Open Access

Breeding value for dry matter intake for Dutch bull based on DGV for DMI and BV for predictors

Veerkamp, R. F., Calus, M. P. L., de Jong, G., van der Linde, R. & de Haas, Y., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Consequences of Splitting Sequencing Effort over Multiple Breeds on Imputation Accuracy

Bouwman, A. C. & Veerkamp, R. F., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Design of Reference Populations for Genomic Selection in Crossbreeding Programs

van Grevenhof, E. M. & van der Werf, J. H. J., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Economic and Environmental Impacts of Improving Growth Rate and Feed Efficiency in Fish Farming Depend on Nitrogen and Density Limitation

Besson, M., Komen, H., Vandeputte, M., Aubin, J., de Boer, I. J. M. & van Arendonk, J. A. M., 2014.

Research output: Contribution to conferenceConference paperAcademic

Open Access

Effect of Genetic Architecture on Accuracy of Multi Breed Genomic Prediction

Wientjes, Y. C. J., Calus, M. P. L., Goddard, M. E. & Hayes, B. J., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Environmental impacts of genetic improvement in growth rate and feed conversion in fish farming under density and nitrogen limitation

Besson, M., Aubin, J., van Arendonk, J. A. M., Komen, H., Poelman, M., Quillet, E., Vandeputte, M. & de Boer, I. J. M., 2014, Proceedings of the Life Cycle Assessment Food Conference (LCA Food 2014). p. 117-124

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Estimation of genetic parameters and breeding values in honey bees

Brascamp, E. W., Veerkamp, R. F. & Bijma, P., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Functional cluster analysis of genome wide associations for energy balance for cows in experimental herds in four European countries

Tolkamp, A., Coffey, M. P., Wall, E., Berry, D. P., Strandberg, E. & Veerkamp, R. F., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Genetic analysis of longevity in Dutch dairy cattle using random regression

van Pelt, M. L. & Veerkamp, R. F., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Genetic Analysis of Shape in Trout, using image analysis

Komen, J., Blonk, R. J. W. & Sae-Lim, P., 2014.

Research output: Contribution to conferenceConference paperAcademic

Open Access

Genetic diversity and measures to reduce inbreeding in Friesian Horses

Ducro, B. J., Windig, J. J., Hellinga, I. & Bovenhuis, H., 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production. p. 797

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genetic Parameters and Accuracy of recording Dry Matter Intake in first parity Holstein-Friesian cows

Manzanilla Pech, C. I. V., Veerkamp, R. F., Calus, M. P. L., Pryce, J. E. & de Haas, Y., 2014.

Research output: Contribution to conferenceConference paperAcademic

Open Access

Genetic Parameters for Endocrine Fertility Traits from In-line Milk Progesterone Records in Dairy Cows

Tenghe, A. M. M., Bouwman, A. C., Berglund, B., Strandberg, E. & Veerkamp, R. F., 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production. p. 151

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genetic parameters of atypical progesterone profiles in Holstein-Friesian Cows using data from Four European Experimental research herds

Nyman, S., Johansson, K., de Koning, D. J., Berry, D. P., Veerkamp, R. F. & Berglund, B., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

Genetics and genomics of fertility in dairy cows

Veerkamp, R. F., Tenghe, A. M. M., Kaal, L. M. T. E. & Bouwman, A. C., 2014, Proceedings of the Nottingham Cattle Fertility Conference 2014. p. 25-30

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomic prediction from whole genome sequence in Livestock: 1000 bull genomics project

Hayes, B. J., MacLeod, A., Daetwyler, H. D., Veerkamp, R. F., Tassell, C., Gredler, B., Druet, T., Bagnato, A., Vilkki, J. & de Koning, D. J., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Genomic predictions for dry matter intake using the international reference population of gDMI

de Haas, Y., Pryce, J. E., Calus, M. P. L., Hulsegge, B., Spurlock, D. M., Berry, D. P., Wall, E., Lovendahl, P., Weigel, K., MacDonald, K., Miglior, F., Krattenmacher, N. & Veerkamp, R. F., 2014, Proceedings of the The 2014 Interbull Meeting. Vol. 48. p. 94-99

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access

Genomic Prediction with 12.5 Million SNPs for 5503 Holstein Friesian Bulls

van Binsbergen, R., Calus, M. P. L., Bink, M. C. A. M., Schrooten, C., van Eeuwijk, F. A. & Veerkamp, R. F., 2014.

Research output: Contribution to conferenceConference paperAcademicpeer-review

Open Access

High Imputation Accuracy in Layer Chicken from Sequence Data on a Few Key Ancestors

Heidaritabar, M., Calus, M. P. L., Vereijken, A., Groenen, M. A. M. & Bastiaansen, J. W. M., 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production. p. 660

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access