Animal Breeding and Genetics

Search results

• Replication Data for: A systematic literature review of the major factors causing yield gap by affecting growth, feed conversion ratio and survival in Nile tilapia (Oreochromisniloticus)

  Mengistu, S. B. (Creator), Mulder, H. (Creator), Benzie, J. (Creator) & Komen, H. (Contributor), Wageningen University & Research, 20 Jul 2020

  DOI: 10.7910/dvn/lspnao

  Dataset

• Data from: Genome-wide single nucleotide polymorphism (SNP) identification and characterization in a non-model organism, the African buffalo (Syncerus caffer), using next generation sequencing

  Smitz, N. (Creator), van Hooft, W. F. (Creator), Heller, R. (Creator), Cornélis, D. (Creator), Chardonnet, P. (Creator), Kraus, R. (Creator), Greyling, B. (Creator), Crooijmans, R. P. M. A. (Creator) & Michaux, J. (Creator), Wageningen University & Research, 26 Sept 2016

  DOI: 10.5061/dryad.q8q11

  Dataset

• Run8: The 1000 Bull Genomes Project

  Daetwyler, H. D. (Creator), Capitan, A. (Creator), Pausch, H. (Creator), Stothard, P. (Creator), van Binsbergen, R. (Creator), Brondum, R. F. (Creator), Liao, X. (Creator), Djari, A. (Creator), Rodriguez, S. C. (Creator), Grohs, C. (Creator), Esquerré, D. (Creator), Bouchez, O. (Creator), Rossignol, M. N. (Creator), Klopp, C. (Creator), Rocha, D. (Creator), Fritz, S. (Creator), Eggen, A. (Creator), Bowman, P. J. (Creator), Coote, D. (Creator), Chamberlain, A. J. (Creator), Anderson, C. L. (Creator), Tassel, C. P. (Creator), Hulsegge, B. (Creator), Goddard, M. E. (Creator), Guldbrandsten, B. (Creator), Lund, M. S. (Creator), Veerkamp, R. F. (Creator), Boichard, D. A. (Creator), Fries, R. (Creator) & Hayes, B. J. (Creator), Wageningen University & Research, 1 Feb 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB42783

  Dataset

• Population-level consequences of complementary sex determination in a solitary parasitoid

  de Boer, J. G. (Creator), Groenen, M. (Creator), Pannebakker, B. A. (Creator), Beukeboom, L. W. (Creator) & Kraus, R. (Creator), Wageningen UR, 2015

  DOI: 10.5061/dryad.jn14s

  Dataset

• IASCHICK

  Xing, S. (Creator), Chinese Academy of Agricultural Sciences, 12 Apr 2019

  https://ngdc.cncb.ac.cn/gsa/browse/CRA001289

  Dataset

• Mutation dynamics of CpG dinucleotides during a recent event of vertebrate diversification

  Pértille, F. (Creator), da Silva, V. (Creator), Johansson, A. M. (Creator), Lindström, T. (Creator), Wright, D. (Creator), Luiz da Costa Coutinho, H. (Creator), Jensen, P. (Creator) & Guerrero-Bosagna, C. (Creator), Linköping University, 30 Mar 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB29249

  Dataset

• Whole genome sequencing of indigenous chickens from Ethiopia

  Gheyas, A. A. (Creator), Vallejo-Trujillo, A. (Creator), Kebede, A. (Creator), Lozano-Jaramillo, M. (Creator), Dessie, T. (Creator), Smith, J. (Creator) & Hanotte, O. (Creator), University of Edinburgh, 1 Jul 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB39275

  Dataset

• Transcription profiling of chicken jejuna in a time series after orally infection with Salmonella

  Schokker, D. (Creator), Wageningen UR, 9 Feb 2009

  https://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2042/

  Dataset

• Baiting out a full length sequence from unmapped RNA-seq data

  Li, D. (Creator) & Huang, Q. (Creator), Chinese Academy of Sciences, 22 Apr 2021

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE172487

  Dataset

• Population structure of five native sheep breeds of Sweden estimated with high density SNP genotypes

  Rochus, C. M. (Creator), Jonas, E. (Creator) & Johansson, A. M. (Creator), Swedish University of Agricultural Sciences, 23 Mar 2020

  DOI: 10.5061/dryad.34tmpg4gj

  Dataset

• Transcription profiling of Bos taurus 4 brain areas at either of 2 phases of oestrous cycle

  Kommadath, A. (Creator), Wageningen UR, 2 May 2014

  https://www.ebi.ac.uk/arrayexpress/experiments/E-TABM-916/

  Dataset

• Large scale variation in copy number in chicken breeds

  Crooijmans, R. (Creator), Fife, M. S. (Creator), Fitzgerald, T. (Creator), Strickland, S. (Creator), Cheng, H. H. (Creator), Kaiser, P. (Creator), Redon, R. (Creator) & Groenen, M. (Creator), Wageningen University, 21 Aug 2013

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE47623

  Dataset

• Gallus gallus D-loop, partial sequence; mitochondrial

  Mullu, N. D. (Creator), Megens, H. J. W. C. (Creator), Crooijmans, R. P. M. A. (Creator), Hanotte, O. (Creator), Mwacharo, J. (Creator), Groenen, M. A. M. (Creator) & van Arendonk, J. A. M. (Creator), Wageningen University & Research, 14 Mar 2011

  https://www.ncbi.nlm.nih.gov/popset/295917202

  Dataset

• Data from: Distinguishing migration events of different timing for wild boar in the Balkans

  Alexandri, P. (Creator), Megens, H. J. W. C. (Creator), Crooijmans, R. P. M. A. (Creator), Groenen, M. (Creator), Goedbloed, D. J. (Creator), Herrero Medrano, J. M. (Creator), Rund, L. A. (Creator), Schook, L. B. (Creator), Chatzinikos, E. (Creator), Triantaphyllidis, C. (Creator) & Triantafyllidis, A. (Creator), Wageningen University & Research, 31 Oct 2016

  DOI: 10.5061/dryad.t722h

  Dataset

• Data from: Genomic diversity and differentiation of a managed island wild boar population

  Iacolina, L. (Creator), Scandura, M. (Creator), Goedbloed, D. J. (Creator), Alexandri, P. (Creator), Crooijmans, R. P. M. A. (Creator), Larson, G. (Creator), Archibald, A. L. (Creator), Apollonio, M. (Creator), Schook, L. B. (Creator), Groenen, M. (Creator) & Megens, H. J. W. C. (Creator), Wageningen University & Research, 2015

  DOI: 10.5061/dryad.8bf48

  Dataset

• Sus scrofa Raw sequence reads

  Wang, Y. (Creator), Zhang, C. (Creator), Peng, Y. (Creator), Cai, X. (Creator), Hu, X. (Creator), Bosse, M. (Creator) & Zhao, Y. (Creator), China Agricultural University, 7 Apr 2021

  https://www.ncbi.nlm.nih.gov/bioproject/720268

  Dataset

• Genome-Wide Association Analysis of adaptation to oxygen stress in Nile tilapia (Oreochromis niloticus)

  Yu, X. (Contributor), WorldFish, 14 Jul 2020

  DOI: 10.7910/dvn/kcbeon

  Dataset

• A Phylogenomic Perspective on the Evolutionary History of the True Geese

  Ottenburghs, J. (Creator), Megens, H. J. W. C. (Creator), Kraus, R. H. S. (Creator), van Hooft, W. F. (Creator), van Wieren, S. E. (Creator), Crooijmans, R. P. M. A. (Creator), Ydenberg, R. C. (Creator), Groenen, M. (Creator) & Prins, H. H. T. (Creator), Wageningen University, 9 Jun 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB20373

  Dataset

• QTL mapping and selection signatures in Groningen White Headed cattle (Optibov Project)

  Gonzalez-Prendes, R. (Creator), Ginja, C. (Creator), Kantanen, J. (Creator), Ghanem, N. (Creator), Kugonza, D. R. (Creator), Makgahlela, M. L. (Creator), Groenen, M. A. M. (Creator) & Crooijmans, R. P. M. A. (Creator), Wageningen University & Research, 27 Oct 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB56301

  Dataset

• Data from: Genetic diversity of Nile tilapia (Oreochromis niloticus) throughout West Africa

  Lind, C. E. (Creator), Agyakwah, S. K. (Creator), Attipoe, F. Y. (Creator), Nugent, C. (Creator), Crooijmans, R. (Creator) & Toguyeni, A. (Creator), Commonwealth Scientific and Industrial Research Organization (CSIRO), 16 Nov 2019

  DOI: 10.5061/dryad.bk3j9kd6m

  Dataset

• Whole genome sequencing of Heterandria formosa reveals information about the evolution of the placenta in the livebearing fish family Poeciliidae

  van Kruistum, H. (Creator), van den Heuvel, J. (Creator), Travis, J. (Creator), Kraaijeveld, K. (Creator), Zwaan, B. (Creator), Groenen, M. (Creator), Megens, H.-J. (Creator) & Pollux, B. (Creator), Wageningen University, 31 Jul 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB28818

  Dataset

• The genomics of adaptation to climate in European great tit (Parus major) populations

  Stonehouse, J. (Creator), Slate, J. (Creator), Spurgin, L. G. (Creator), Laine, V. N. (Creator), Bosse, M. (Creator), Groenen, M. A. M. (Creator), Van Oers, K. (Creator), Sheldon, B. C. (Creator) & Visser, M. (Creator), Dryad, 2 Jun 2023

  DOI: 10.5061/dryad.vt4b8gtxd

  Dataset

• Data from: Genome-wide SNP data unveils the globalization of domesticated pigs

  Yang, B. (Creator), Cui, L. (Creator), Pérez-Enciso, M. (Creator), Traspov, A. (Creator), Crooijmans, R. P. M. A. (Creator), Zinovieva, N. (Creator), Schook, L. B. (Creator), Gatphayak, K. (Creator), Knorr, C. (Creator), Triantafyllidis, A. (Creator), Alexandri, P. (Creator), Semiadi, G. (Creator), Hanotte, O. (Creator), Dias, D. (Creator), Dovč, P. (Creator), Uimari, P. (Creator), Iacolina, L. (Creator), Scandura, M. (Creator), Groenen, M. (Creator), Huang, L. (Creator) & Megens, H. J. W. C. (Creator), National Key Laboratory for Pig Genetic Improvement and Production Technology, 25 Sept 2017

  DOI: 10.5061/dryad.30tk6

  Dataset

• Indexed pPHRED scores

  Gross, C. (Creator), Derks, M. (Creator), Megens, H.-J. (Creator), Bosse, M. (Creator), Groenen, M. A. M. (Creator), Reinders, M. J. T. (Creator) & de Ridder, D. (Creator), Wageningen University & Research, 2020

  http://www.bioinformatics.nl/pCADD/indexed_pPHRED-scores/

  Dataset

• Data from: Modeling winter moth Operophtera brumata egg phenology: nonlinear effects of temperature and developmental stage on developmental rate

  Salis, L. (Creator), Lof, M. E. (Creator), van Asch, M. (Creator) & Visser, M. E. (Creator), Wageningen University & Research, 2016

  DOI: 10.5061/dryad.8t3v5

  Dataset