Transcriptional response of Arabidopsis thaliana shoot tissue to root inoculation with fungal endophytes under different organic nutrient amendments

  • Jose Maciá Vicente (Goethe University Frankfurt, Netherlands Institute of Ecology (NIOO-KNAW) (Creator)
  • Bing Bai (University of Copenhagen) (Creator)
  • Run Qi (Creator)
  • Sebastian Ploch (Creator)
  • Florian Breider (Creator)
  • Marco Thines (Creator)



We profiled the shoot transcriptome of Arabidopsis thaliana Col-0 plants uninoculated and inoculated with different strains of root endophytic fungi, from different taxonomic groups and habitat origins, exposed to presence and absence of organic sources of nitrogen and phosphorous. Plants were grown in gnotobiotic conditions for four weeks post-inoculation.
Date made available4 Mar 2021


  • Raw sequence reads
  • Multispecies

Accession numbers

  • PRJNA706587

Cite this