The Natural Products Atlas - data download

  • Jeffrey A. Van Santen (Creator)
  • Grégoire Jacob (Creator)
  • Amrit Leen Singh (Creator)
  • Victor Aniebok (Creator)
  • Marcy J. Balunas (Creator)
  • Derek Bunsko (Creator)
  • Fausto Carnevale Neto (Creator)
  • Laia Castaño-Espriu (Creator)
  • Chen Chang (Creator)
  • Trevor N. Clark (Creator)
  • Jessica L. Cleary Little (Creator)
  • David A. Delgadillo (Creator)
  • P.C. Dorrestein (Creator)
  • Katherine R. Duncan (Creator)
  • Joseph M. Egan (Creator)
  • Melissa M. Galey (Creator)
  • Jake Haeckl (Creator)
  • Alex Hua (Creator)
  • Alison H. Hughes (Creator)
  • Dasha Iskakova (Creator)
  • Aswad Khadilkar (Creator)
  • Jung Ho Lee (Creator)
  • Sanghoon Lee (Creator)
  • Nicole Legrow (Creator)
  • Dennis Y. Liu (Creator)
  • Jocelyn M. Macho (Creator)
  • Catherine S. McCaughey (Creator)
  • Marnix Medema (Creator)
  • Ram P. Neupane (Creator)
  • Timothy J. O'Donnell (Creator)
  • Jasmine S. Paula (Creator)
  • Laura M. Sanchez (Creator)
  • Anam F. Shaikh (Creator)
  • Sylvia Soldatou (Creator)
  • Barbara R. Terlouw (Creator)
  • Tuan Anh Tran (Creator)
  • Mercia Valentine (Creator)
  • Justin van der Hooft (Creator)
  • Duy A. Vo (Creator)
  • Mingxun Wang (Creator)
  • Darryl Wilson (Creator)
  • Katherine E. Zink (Creator)
  • Roger G. Linington (Creator)

Dataset

Description

Download files from the Natural Products Atlas (npatlas.org).

van Santen, J. A.; Jacob, G.; Leen Singh, A.; Aniebok, V.; Balunas, M. J.; Bunsko, D.; Carnevale Neto, F.; Castaño-Espriu, L.; Chang, C.; Clark, T. N.; Cleary Little, J. L.; Delgadillo, D. A.; Dorrestein, P. C.; Duncan, K. R.; Egan, J. M.; Galey, M. M.; Haeckl, F. P. J.; Hua, A.; Hughes, A. H.; Iskakova, D.; Khadilkar, A.; Lee, J.-H.; Lee, S.; LeGrow, N.; Liu, D. Y.; Macho, J. M.; McCaughey, C. S.; Medema, M. H.; Neupane, R. P.; O’Donnell, T. J.; Paula, J. S.; Sanchez, L. M.; Shaikh, A. F.; Soldatou, S.; Terlouw, B. R.; Tran, T. A.; Valentine, M.; van der Hooft, J. J. J.; Vo, D. A.; Wang, M.; Wilson, D.; Zink, K. E.; Linington, R. G.* "The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery”, ACS Central Science, 2019, 5, 11, 1824-1833. 10.1021/acscentsci.9b00806

Now includes ontological data from:
NP Classifier - https://npclassifier.ucsd.edu/
ClassyFire - http://classyfire.wishartlab.com/
Including archived versions, extra data download types, and new MIBiG and GNPS IDs
Includes dump of compounds deemed out of scope and removed from DB on May 19, 2021.
The latest versions (v2021_08 onward) include the ontological data in the full JSON download.
Date made available19 May 2021
PublisherWageningen University

Keywords

  • Natural Products
  • Chemistry

  • The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery

    Van Santen, J. A., Jacob, G., Singh, A. L., Aniebok, V., Balunas, M. J., Bunsko, D., Neto, F. C., Castaño-Espriu, L., Chang, C., Clark, T. N., Cleary Little, J. L., Delgadillo, D. A., Dorrestein, P. C., Duncan, K. R., Egan, J. M., Galey, M. M., Haeckl, J., Hua, A., Hughes, A. H., Iskakova, D., & 23 othersKhadilkar, A., Lee, J. H., Lee, S., Legrow, N., Liu, D. Y., Macho, J. M., McCaughey, C. S., Medema, M. H., Neupane, R. P., O'Donnell, T. J., Paula, J. S., Sanchez, L. M., Shaikh, A. F., Soldatou, S., Terlouw, B. R., Tran, T. A., Valentine, M., Van Der Hooft, J. J. J., Vo, D. A., Wang, M., Wilson, D., Zink, K. E. & Linington, R. G., 27 Nov 2019, In: ACS Central Science. 5, 11, p. 1824-1833 10 p.

    Research output: Contribution to journal › Article › Academic › peer-review

    Open Access
    250 Citations (Scopus)

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