small RNAseq - Plant parasitic cyst nematodes respond to viral infection through siRNA activation

Dataset

Description

In this project we sequenced smallRNAs to see how both BCN (H.schachtii) and PCN (G. rostochiensis line 19 and 22) react to different viruses. After adapter removal, small RNA analysis was performed on sequences from 18 to 28 nt in length. Also the smallRNAs are mapped to the reference genomes of the nematodes to look for smallRNAs.
Date made available25 Dec 2023
PublisherWageningen University & Research

Keywords

  • Heterodera schachtii
  • Globodera rostochiensis

Accession numbers

  • E-MTAB-13351
  • ERP151239
  • PRJEB66168

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