Nematode community metabarcoding using full SSU rRNA sequences

Dataset

Description

Because of their trophic diversity, high abundance, and relatively well-characterized ecologies, nematodes are often used as soil health indicators. However, the scarcity of informative morphological characters hampers the upscaling of this proxy. In the accompanied study, we present a community analysis approach that uses Oxford Nanopore sequencing to generate full-length sequences of small subunit ribosomal DNAs (SSU rDNA) of nematodes.
Date made available11 May 2023
PublisherWageningen University & Research

Keywords

  • nematodes
  • Oxford Nanopore sequencing

Accession numbers

  • PRJNA971608

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