Metagenome manure-rhizosphere-soil (AB-treated)

Dataset

Description

Shotgun metagenome of manure-fertilized soils on which leek and lollo rosso was grown. Selected samples were spiked with a marker E. coli strain or treated with sulfadiazine at 2 concentrations. We want to follow transmission of potential human pathogens and gain insight into AB resistance dynamics under agriculturally relevant conditions.
Date made available24 Feb 2020
PublisherWageningen University & Research

Keywords

  • Multispecies
  • leek
  • lollo rosso

Accession numbers

  • PRJNA608274

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