ITS2 Global database

  • Andreia Quaresma (Creator)
  • Joana Amaral (Creator)
  • Robert Brodschneider (Creator)
  • Valters Brusbardis (Creator)
  • Kristina Gratzer (Creator)
  • Fani Hatjina (Creator)
  • Mónica Honrado (Creator)
  • Ole Kilpinen (Creator)
  • Marco Pietropaoli (Creator)
  • Ivo Roessink (Creator)
  • José Rufino (Creator)
  • Jozef van der Steen (Creator)
  • Flemming Vejsnaes (Creator)
  • Carlos Ariel Yadró Garcia (Creator)
  • Maria Alice Pinto (Creator)
  • Alexander Keller (Creator)

Dataset

Description

A Viridiplantae ITS2 reference database created using BCdatabaser with the following parameters:

25 sequences per species
sequencing length: 100 - 2000 bp

This database was curated using a curation pipeline workflow available on GitHub.

If you use this dataset, please cite Quaresma et al. 2024, Scientific Data, DOI: 10.1038/s41597-024-02962-5
Date made available24 May 2023
PublisherInstituto Politécnico de Bragança

Keywords

  • internal transcribed spacer 2 (ITS2)
  • database
  • barcoding
  • Viridiplantae
  • Viridiplantae Genome sequencing

    Quaresma, A. (Creator), Ankenbrand, M. J. (Creator), Yadró Garcia, C. A. (Creator), Rufino, J. (Creator), Honrado, M. (Creator), Amaral, J. (Creator), Brodschneider, R. (Creator), Brusbardis, V. (Creator), Gratzer, K. (Creator), Hatjina, F. (Creator), Kilpinen, O. (Creator), Pietropaoli, M. (Creator), Roessink, I. (Creator), van der Steen, J. (Creator), Vejsnaes, F. (Creator), Pinto, M. A. (Creator) & Keller, A. (Creator), Instituto Politécnico de Bragança, 28 Oct 2023

    Dataset

  • ITS2 European countries

    Quaresma, A. (Creator), Amaral, J. (Creator), Brodschneider, R. (Creator), Brusbardis, V. (Creator), Gratzer, K. (Creator), Hatjina, F. (Creator), Honrado, M. (Creator), Kilpinen, O. (Creator), Pietropaoli, M. (Creator), Roessink, I. (Creator), Rufino, J. (Creator), van der Steen, J. (Creator), Vejsnaes, F. (Creator), Yadró Garcia, C. A. (Creator), Pinto, M. A. (Creator) & Keller, A. (Creator), Instituto Politécnico de Bragança, 25 May 2023

    Dataset

  • ITS2 Crop database

    Quaresma, A. (Creator), Amaral, J. (Creator), Brodschneider, R. (Creator), Brusbardis, V. (Creator), Gratzer, K. (Creator), Hatjina, F. (Creator), Honrado, M. (Creator), Kilpinen, O. (Creator), Pietropaoli, M. (Creator), Roessink, I. (Creator), Rufino, J. (Creator), van der Steen, J. (Creator), Vejsnaes, F. (Creator), Yadró Garcia, C. A. (Creator), Pinto, M. A. (Creator) & Keller, A. (Creator), Instituto Politécnico de Bragança, 25 May 2023

    Dataset

Cite this