Research output per year
Research output per year
Description
A reference database for the European crops created using BCdatabaser with the following parameters: 100 sequences per species sequencing length: 100 - 2000 bp This database was curated using a curation pipeline workflow available in GitHub.
| Date made available | 25 May 2023 |
|---|---|
| Publisher | Instituto Politécnico de Bragança |
Keywords
- internal transcribed spacer 2 (ITS2)
- database
- barcoding
- European crops
Research output
- 1 Preprint
-
Semi-automated curation and manual addition of sequences to build reliable and extensive reference databases for ITS2 vascular plant DNA (meta-)barcoding
Quaresma, A., Yadró Garcia, C. A., Rufino, J., Honrado, M., Amaral, J., Brodschneider, R., Brusbardis, V., Gratzer, K., Hatjina, F., Kilpinen, O., Pietropaoli, M., Roessink, I., van der Steen, J. J. M., Vejsnaes, F., Pinto, M. A. & Keller, A., 13 Jun 2023, BioRxiv.Research output: Working paper › Preprint
Datasets
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ITS2 Global database
Quaresma, A. (Creator), Amaral, J. (Creator), Brodschneider, R. (Creator), Brusbardis, V. (Creator), Gratzer, K. (Creator), Hatjina, F. (Creator), Honrado, M. (Creator), Kilpinen, O. (Creator), Pietropaoli, M. (Creator), Roessink, I. (Creator), Rufino, J. (Creator), van der Steen, J. J. M. (Creator), Vejsnaes, F. (Creator), Yadró Garcia, C. A. (Creator), Pinto, M. A. (Creator) & Keller, A. (Creator), Instituto Politécnico de Bragança, 24 May 2023
Dataset
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ITS2 European countries
Quaresma, A. (Creator), Amaral, J. (Creator), Brodschneider, R. (Creator), Brusbardis, V. (Creator), Gratzer, K. (Creator), Hatjina, F. (Creator), Honrado, M. (Creator), Kilpinen, O. (Creator), Pietropaoli, M. (Creator), Roessink, I. (Creator), Rufino, J. (Creator), van der Steen, J. J. M. (Creator), Vejsnaes, F. (Creator), Yadró Garcia, C. A. (Creator), Pinto, M. A. (Creator) & Keller, A. (Creator), Instituto Politécnico de Bragança, 25 May 2023
Dataset