Differential gene expression in roots of tcp9 and tcp20 mutants of Arabidopsis thaliana upon Heterodera schachtii infection as measured by RNAseq



We compared the gene expression of wild-type Col-0, tcp9, tcp20, and the double mutant tcp9tcp20. We either infected or mock-infected the plants with the beet cyst nematode Heterodera schachtii and measured the root transcriptome after 24, 48, and 72 hours post infection using RNA-seq. The aim of the experiment was to determine whether the tcp mutatants affected gene expression patterns induced by nematode infection.
Date made available9 Sept 2022
PublisherWageningen University & Research


  • Arabidopsis thaliana
  • RNA-seq of coding RNA

Accession numbers

  • E-MTAB-11649

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