Determination of variability of fermentor-grown Aspergillus niger

  • Douwe van der Veen (Creator)
  • Jose-Miguel Pimenta Ferreira De Oliveira (Creator)
  • Willy van den Berg (Creator)
  • Leo de Graaff (Creator)

Dataset

Description

Knowledge of the biological and technical variation for fermentor-grown Aspergillus niger cultures is needed to design DNA microarray experiments properly. We cultured A. niger in batch-operated fermentor vessels and induced with D-xylose. Transcript profiles were followed in detail by qPCR for 8 genes. A variance components analysis was performed on these data to determine the origin and magnitude of variation within each process step for this experiment.
Date made available31 Dec 2008
PublisherWageningen University and Research Centre

Research Output

Identification of modules in Aspergillus niger by gene co-expression network analysis

van den Berg, R. A., Braaksma, M., van der Veen, D., van der Werf, M. J., Punt, P. J., van der Oost, J. & de Graaff, L. H., 2010, In : Fungal Genetics and Biology. 47, 6, p. 539-550

Research output: Contribution to journalArticleAcademicpeer-review

  • 11 Citations (Scopus)

    Analysis of variance components reveals the contribution of sample processing to transcript variation

    van der Veen, D., Oliveira, J. M., van den Berg, W. A. M. & de Graaff, L. H., 2009, In : Applied and Environmental Microbiology. 75, 8, p. 2414-2422

    Research output: Contribution to journalArticleAcademicpeer-review

    Open Access
  • 23 Citations (Scopus)

    Cite this

    van der Veen, D. (Creator), Pimenta Ferreira De Oliveira, J. (Creator), van den Berg, W. (Creator), de Graaff, L. (Creator) (31 Dec 2008). Determination of variability of fermentor-grown Aspergillus niger. Wageningen University and Research Centre.