Research output per year
Research output per year
Description
Knowledge of the biological and technical variation for fermentor-grown Aspergillus niger cultures is needed to design DNA microarray experiments properly. We cultured A. niger in batch-operated fermentor vessels and induced with D-xylose. Transcript profiles were followed in detail by qPCR for 8 genes. A variance components analysis was performed on these data to determine the origin and magnitude of variation within each process step for this experiment.
| Date made available | 31 Dec 2008 |
|---|---|
| Publisher | Wageningen University and Research Centre |
Keywords
- Aspergillus niger
Accession numbers
- GSE11405
- PRJNA106533
Research output
- 2 Article
-
Identification of modules in Aspergillus niger by gene co-expression network analysis
van den Berg, R. A., Braaksma, M., van der Veen, D., van der Werf, M. J., Punt, P. J., van der Oost, J. & de Graaff, L. H., 2010, In: Fungal Genetics and Biology. 47, 6, p. 539-550Research output: Contribution to journal › Article › Academic › peer-review
13 Citations (Scopus) -
Analysis of variance components reveals the contribution of sample processing to transcript variation
van der Veen, D., Oliveira, J. M., van den Berg, W. A. M. & de Graaff, L. H., 2009, In: Applied and Environmental Microbiology. 75, 8, p. 2414-2422Research output: Contribution to journal › Article › Academic › peer-review
Open Access23 Citations (Scopus)